Clone Name | rbastl16e04 |
---|---|
Clone Library Name | barley_pub |
>gb|AC158581.2| Mus musculus chromosome 3, clone RP24-264G1, complete sequence Length = 166808 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 tgctgagacatccatcatcca 252 ||||||||||||||||||||| Sbjct: 107588 tgctgagacatccatcatcca 107608
>gb|AC102278.10| Mus musculus chromosome 3, clone RP24-298A6, complete sequence Length = 184908 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tgctgagacatccatcatcca 252 ||||||||||||||||||||| Sbjct: 11976 tgctgagacatccatcatcca 11956
>gb|BC092191.1| Rattus norvegicus cDNA clone IMAGE:7111416, **** WARNING: chimeric clone **** Length = 4570 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ttcgttcctcacctccagctccat 79 |||||||||| ||||||||||||| Sbjct: 3089 ttcgttcctctcctccagctccat 3112
>emb|BX927372.14| Zebrafish DNA sequence from clone CH211-241H14 in linkage group 13, complete sequence Length = 138336 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaaacacaatgaatcagatcac 184 ||||||||||||||| |||||||| Sbjct: 18801 accaaacacaatgaaccagatcac 18778
>emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in linkage group 13, complete sequence Length = 278040 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 accaaacacaatgaatcagatcac 184 ||||||||||||||| |||||||| Sbjct: 242072 accaaacacaatgaaccagatcac 242049
>gb|AC147839.2| Xenopus tropicalis clone CH216-9N23, complete sequence Length = 184473 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 catggaaccatccaaaccca 156 |||||||||||||||||||| Sbjct: 152795 catggaaccatccaaaccca 152814
>gb|BC087131.1| Rattus norvegicus glutamate-ammonia ligase (glutamine synthase), mRNA (cDNA clone MGC:94942 IMAGE:7112880), complete cds Length = 4157 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttcgttcctcacctccagctccat 79 |||||||||| ||||||||||||| Sbjct: 2805 ttcgttcctctcctccagctccat 2782
>ref|NM_017073.2| Rattus norvegicus glutamate-ammonia ligase (glutamine synthase) (Glul), mRNA Length = 4157 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttcgttcctcacctccagctccat 79 |||||||||| ||||||||||||| Sbjct: 2805 ttcgttcctctcctccagctccat 2782
>emb|X92074.1|RNGLUSYNI R.norvegicus glutamine synthetase intron 1 Length = 1938 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ttcgttcctcacctccagctccat 79 |||||||||| ||||||||||||| Sbjct: 1013 ttcgttcctctcctccagctccat 990 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,263,585 Number of Sequences: 3902068 Number of extensions: 2263585 Number of successful extensions: 53693 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53680 Number of HSP's gapped (non-prelim): 13 length of query: 261 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 239 effective length of database: 17,147,199,772 effective search space: 4098180745508 effective search space used: 4098180745508 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)