Clone Name | rbastl16d12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TS1R1_HUMAN (Q7RTX1) Taste receptor type 1 member 1 precursor (G... | 33 | 0.19 | 2 | OXAA_HAEDU (Q7VPM2) Inner membrane protein oxaA | 30 | 1.3 | 3 | CAF5_SCHPO (O94528) Caffeine resistance protein 5 | 30 | 2.1 | 4 | OXAA_PASMU (Q9CLQ2) Inner membrane protein oxaA | 29 | 2.8 | 5 | OXAA_HAEIN (P44973) Inner membrane protein oxaA | 29 | 2.8 | 6 | TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G... | 29 | 3.6 |
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>TS1R1_HUMAN (Q7RTX1) Taste receptor type 1 member 1 precursor (G-protein| coupled receptor 70) (Gm148) Length = 841 Score = 33.1 bits (74), Expect = 0.19 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 168 EETKWVIWQCF*VGSLFLLGPTGIFVWKLILPLFFADGGDVTFI 37 E T WV+ + L LLG G+F W L P+ + GG + F+ Sbjct: 564 EHTSWVLLAANTLLLLLLLGTAGLFAWHLDTPVVRSAGGRLCFL 607
>OXAA_HAEDU (Q7VPM2) Inner membrane protein oxaA| Length = 536 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -3 Query: 163 N*MGNLAVLLSRLSVFIGTYWHF--CLEVDTAPFFCGW 56 N MG L+ ++ +FI YW F +E+ APFF GW Sbjct: 409 NPMGGCLPLILQMPIFIALYWTFMEAVELRHAPFF-GW 445
>CAF5_SCHPO (O94528) Caffeine resistance protein 5| Length = 531 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 Query: 132 VGSLFLLGPTGIFVWKLILPLFFADGGD 49 VG+L L +F++K+++P F A GGD Sbjct: 365 VGALITLACYFVFLYKVMIPAFMASGGD 392
>OXAA_PASMU (Q9CLQ2) Inner membrane protein oxaA| Length = 541 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -3 Query: 163 N*MGNLAVLLSRLSVFIGTYWHF--CLEVDTAPFFCGW 56 N +G +L ++ +FI YW F +E+ APFF GW Sbjct: 414 NPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFF-GW 450
>OXAA_HAEIN (P44973) Inner membrane protein oxaA| Length = 541 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -3 Query: 163 N*MGNLAVLLSRLSVFIGTYWHF--CLEVDTAPFFCGW 56 N +G +L ++ +FI YW F +E+ APFF GW Sbjct: 414 NPLGGCLPILLQMPIFIALYWTFLEAVELRHAPFF-GW 450
>TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G-protein| coupled receptor 70) Length = 842 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 123 LFLLGPTGIFVWKLILPLFFADGGDVTFI 37 L L+G G+F W+L P+ + GG + F+ Sbjct: 580 LLLIGTAGLFAWRLHTPVVRSAGGRLCFL 608 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,599,017 Number of Sequences: 219361 Number of extensions: 729553 Number of successful extensions: 2081 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2081 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)