>GID_BACSK (Q5WFP8) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 436

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -1

Query: 183 SRLTCGRNLKGTALINTVDILYTRAGHFDGAFLHCKTSVTARTYGNVILDVND 25
           + L C  +L+G +L N V +L     H D   +           G + +D +D
Sbjct: 50  AELVCSNSLRGNSLANAVGVLKEEMRHLDSVIIKAADEAAVPAGGALAVDRHD 102

>GID_STAES (Q8CPH2) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 435

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -1

Query: 183 SRLTCGRNLKGTALINTVDILYTRAGHFDGAFLHCKTSVTARTYGNVILDVND 25
           + L C  +L+G AL N V +L     H D   +           G + +D +D
Sbjct: 48  AELVCSNSLRGNALTNAVGVLKEEMRHLDSLIITSADKARVPAGGALAVDRHD 100

>GID_STAEQ (Q5HPU1) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 435

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -1

Query: 183 SRLTCGRNLKGTALINTVDILYTRAGHFDGAFLHCKTSVTARTYGNVILDVND 25
           + L C  +L+G AL N V +L     H D   +           G + +D +D
Sbjct: 48  AELVCSNSLRGNALTNAVGVLKEEMRHLDSLIITSADKARVPAGGALAVDRHD 100

>NO26B_SOYBN (P08863) Nodulin 26B precursor (N-26B)|
          Length = 219

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +3

Query: 36  QELHFHKYEPLLKFYSV-KMPRQNDQRVCIKYLPC*SMPC--LSNSYHRSAYSAGGARLS 206
           Q  ++ +YEPLL+F +V +       R C+      + P   LS+S H S     GA   
Sbjct: 152 QGFYYFQYEPLLQFRTVLRTCSLESARTCLNAPNVATSPLGRLSHSIHESCVYPSGAESG 211

Query: 207 TMSGP 221
           T S P
Sbjct: 212 TGSLP 216

>YL688_MIMIV (Q5UNV2) Hypothetical protein L688|
          Length = 236

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 22/76 (28%), Positives = 30/76 (39%)
 Frame = +1

Query: 1   QFCILLFAIIHIKNYISISTSRY*SFTV*KCPVKMTSACV*NIYRVNQCRAFQIPTTGQP 180
           Q  + +F I+  +NY S     Y   T   C     S C+   Y  N     Q+ T+ QP
Sbjct: 6   QLILEIFQIMSCQNYQSYGCGTYPCVTYGNCYTTCASPCL--PYPTN---CVQVCTSSQP 60

Query: 181 TPPAGRG*APCRAPSP 228
            P      +PC  P P
Sbjct: 61  CP------SPCPIPVP 70

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 6   LHSPLCHHSHQELHFHKYEPLLK-FYSVKMPRQNDQR 113
           LH  L HH H  LH H   P+L+  YS++   Q  Q+
Sbjct: 22  LHHHLSHHHHPALHHH---PVLQHHYSLQQQHQQQQQ 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,715,137
Number of Sequences: 219361
Number of extensions: 600158
Number of successful extensions: 1759
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)