Clone Name | rbastl16c04 |
---|---|
Clone Library Name | barley_pub |
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 200 SCLRNFHCPACIFSVASPPITSSMRSL-KMDLSMSKIMPCSSP 325 S L+NF P+C F+ P S ++ L K+DLS + + CS P Sbjct: 210 SLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNP-LKCSIP 251
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 29.6 bits (65), Expect = 1.9 Identities = 20/59 (33%), Positives = 27/59 (45%) Frame = +1 Query: 124 LHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLATYNLVNEVPENGPLNV 300 L L+A + G D Q+ + T Q P+ P SLH + LA N N GP+ V Sbjct: 959 LEALLAAVKTGQDLQKLVTPETPLVQYPSLAPWLSLHSI--LARINECNRCHHEGPVTV 1015
>CAD13_CHICK (P33150) Cadherin-13 precursor (Truncated-cadherin) (T-cadherin)| (T-cad) Length = 712 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +2 Query: 167 NSHIQFILLKDSCLRNFHCPACIFSVASPPITSSMRSLKMDLSMSK--IMPCSSPSGL 334 N+H Q +LL++ N++ P + PP+T++ LK+ + K M CS+ L Sbjct: 639 NTHAQVVLLQNLKKANYNIPISVTDSGKPPLTNN-TELKLQVCSCKKSRMDCSASDAL 695
>TBCE_XENLA (Q5U508) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 522 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 257 ITSSMRSL-KMDLSMSKIMPCSSPSGLPQSFISYNASSDN 373 I+S + +L +DLS +K+ P S+PS L SF + S N Sbjct: 169 ISSQLENLTSLDLSENKLNPSSNPSSLATSFCNLKVLSLN 208
>PCDBF_HUMAN (Q9Y5E8) Protocadherin beta 15 precursor (PCDH-beta15)| Length = 787 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = +1 Query: 58 PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231 PEF + LY + ++S + + + G + + SYS+Y + +++ F LSSL Sbjct: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSL 297
>LAR_CAEEL (Q9BMN8) Tyrosine-protein phosphatase Lar-like precursor (EC| 3.1.3.48) (Protein-tyrosine phosphate 3) Length = 2200 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +2 Query: 245 ASPPITSSMRSLKMDLSMSKIMPCSSPSGLPQSFISY 355 A+ P++ RSL D + K PC P+GL + Y Sbjct: 437 ATAPVSPQARSLNRDSILVKWGPCEQPNGLITGYKVY 473
>Y676_MYCPN (P75116) Hypothetical protein MPN676 (K05_orf106)| Length = 106 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/57 (24%), Positives = 29/57 (50%) Frame = +1 Query: 85 FYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLAT 255 +Y+ +++ ++ +K+P+GN Q ++ T+ L + LS HLL + T Sbjct: 46 YYVFGFFTFRWQRSLIITSKVPSGNGIQFDFNSRTSHWLLNFLYSLSEYHLLFKVKT 102
>GLB_NASMU (P31331) Globin (Myoglobin)| Length = 147 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -2 Query: 291 RSIFRDLIDEVIGGEATEKMQA 226 RSIF + +D+ GG+ATE M++ Sbjct: 112 RSIFGEFLDKATGGKATESMKS 133
>DHB1_RAT (P51657) Estradiol 17-beta-dehydrogenase 1 (EC 1.1.1.62)| (17-beta-HSD 1) (17-beta-hydroxysteroid dehydrogenase 1) Length = 344 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 121 GLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPL 222 GLHL V +D QS+ VY T R L +Q PL Sbjct: 16 GLHLAVRL---ASDRSQSFKVYATLRDLKSQGPL 46
>PCDBF_PANTR (Q5DRD3) Protocadherin beta 15 precursor (PCDH-beta15)| Length = 787 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +1 Query: 58 PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231 PEF + LY + ++S + + + G + + SYS+Y + ++ F LSSL Sbjct: 240 PEFAQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSL 297
>SYFB_NOVAD (Q2GAI7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 796 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 303 LDIERSIFRDLIDEVIGGEATEKMQAGQWKLRRQ 202 LD + LI E+ GGEA+E ++AG+ L R+ Sbjct: 368 LDTGLDLLTSLILEICGGEASEVVRAGEPPLARK 401
>ARSS_CENAS (Q8GGJ7) Arsenite oxidase small subunit precursor (EC 1.20.98.1)| Length = 173 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/71 (26%), Positives = 34/71 (47%) Frame = +2 Query: 158 TIINSHIQFILLKDSCLRNFHCPACIFSVASPPITSSMRSLKMDLSMSKIMPCSSPSGLP 337 +I+ +H+ + D+ + F CP C FSV P + +++ + LP Sbjct: 97 SILCTHMGCPVSYDASAKTFKCP-CHFSVFDPD------------NHGQMVCGQATENLP 143 Query: 338 QSFISYNASSD 370 Q +SYNA++D Sbjct: 144 QIQLSYNAAND 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,677,326 Number of Sequences: 219361 Number of extensions: 916418 Number of successful extensions: 2556 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2556 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)