ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
3dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
4dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
5dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
6emb|Z75541.1|CEF52B5 Caenorhabditis elegans Cosmid F52B5, comple... 44 0.32
7emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chro... 42 1.3
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
9gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p... 42 1.3
10dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
11dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Pa... 42 1.3
13gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence,... 40 5.0
14gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, co... 40 5.0
15ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.0
16gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, com... 40 5.0
17gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosom... 40 5.0
18gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, com... 40 5.0
19gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, com... 40 5.0
20emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097... 40 5.0
21emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section... 40 5.0
22emb|X96983.1|BS75DGREG B.subtilis chromosomal DNA (region 75 deg... 40 5.0
23emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 5.0
24gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Canc... 40 5.0
25emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chro... 40 5.0
26emb|CR626863.4| Mouse DNA sequence from clone RP23-348H1 on chro... 40 5.0
27dbj|AK133320.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.0
28gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, comple... 40 5.0
29gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, comple... 40 5.0
30gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, compl... 40 5.0
31gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosom... 40 5.0
32gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D... 40 5.0
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
34gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complet... 40 5.0
35gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complet... 40 5.0
36gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complet... 40 5.0
37gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a... 40 5.0
38dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
39dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
40dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
41dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
42gb|AC154369.1| Mus musculus BAC clone RP24-572H8 from 17, comple... 40 5.0
43gb|U58859.1|BSU58859 Bacillus subtilis putative lipoprotein and ... 40 5.0
44emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in li... 40 5.0
45gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosom... 40 5.0
46gb|L17342.1|HEAHPAX Haemophilus parainfluenzae Valyl-tRNA synthe... 40 5.0 
>ref|XM_479072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3136

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 173  catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232
            ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 3025 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2966

                                                         
Query: 233  atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277
            |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 2965 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2921



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 68   aggaataattatatttcttctata 91
            ||||||| ||||||||||||||||
Sbjct: 3135 aggaatatttatatttcttctata 3112
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 173      catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232
                ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 24610857 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 24610916

                                                             
Query: 233      atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277
                |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 24610917 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 24610961



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 68       aggaataattatatttcttctata 91
                ||||||| ||||||||||||||||
Sbjct: 24610747 aggaatatttatatttcttctata 24610770
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 173   catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232
             ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 66924 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 66983

                                                          
Query: 233   atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277
             |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 66984 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 67028



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    aggaataattatatttcttctata 91
             ||||||| ||||||||||||||||
Sbjct: 66814 aggaatatttatatttcttctata 66837
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0018H10
          Length = 135879

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 173    catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232
              ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 104151 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 104210

                                                           
Query: 233    atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277
              |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 104211 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 104255



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 68     aggaataattatatttcttctata 91
              ||||||| ||||||||||||||||
Sbjct: 104041 aggaatatttatatttcttctata 104064
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>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full
            insert sequence
          Length = 3135

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 173  catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232
            ||||||||| || ||||||| || |||||||||||    |  ||||| |||||| |||||
Sbjct: 3024 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2965

                                                         
Query: 233  atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277
            |||||| |||| |||||  | | ||| ||||||||||||||||||
Sbjct: 2964 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2920
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>emb|Z75541.1|CEF52B5 Caenorhabditis elegans Cosmid F52B5, complete sequence
          Length = 33274

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 293   tcaatgtccaaaatcatgccttgtag 318
             ||||| ||||||||||||||||||||
Sbjct: 30985 tcaatttccaaaatcatgccttgtag 31010
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>emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chromosome 6 Contains a
             putative novel gene, complete sequence
          Length = 72139

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    atttcttctatataattcagt 100
             |||||||||||||||||||||
Sbjct: 46312 atttcttctatataattcagt 46292
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 94      attcagtcttcagagaaaaaataca 118
               |||||||||||||||| ||||||||
Sbjct: 3831279 attcagtcttcagagacaaaataca 3831303



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      ttcagtcttcagagaaaaaa 114
               ||||||||||||||||||||
Sbjct: 1826837 ttcagtcttcagagaaaaaa 1826818
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>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence
          Length = 153013

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    attcagtcttcagagaaaaaa 114
             |||||||||||||||||||||
Sbjct: 95258 attcagtcttcagagaaaaaa 95238
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>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_A06
          Length = 176062

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 94    attcagtcttcagagaaaaaataca 118
             |||||||||||||||| ||||||||
Sbjct: 87611 attcagtcttcagagacaaaataca 87635
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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 94    attcagtcttcagagaaaaaataca 118
             |||||||||||||||| ||||||||
Sbjct: 29750 attcagtcttcagagacaaaataca 29774
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>gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184680

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    attcagtcttcagagaaaaaa 114
             |||||||||||||||||||||
Sbjct: 83362 attcagtcttcagagaaaaaa 83342
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>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced
          Length = 90756

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tttcatctcatacaatgcat 362
             ||||||||||||||||||||
Sbjct: 66206 tttcatctcatacaatgcat 66187
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>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence
          Length = 194548

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   caatgaggtccctgaaaatg 286
             ||||||||||||||||||||
Sbjct: 18627 caatgaggtccctgaaaatg 18646
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>ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04213g)
           partial mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 cgtcaatgaggtccctgaaa 283
           ||||||||||||||||||||
Sbjct: 270 cgtcaatgaggtccctgaaa 289
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>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence
          Length = 256791

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    caatgaggtccctgaaaatg 286
              ||||||||||||||||||||
Sbjct: 163342 caatgaggtccctgaaaatg 163361
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>gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosome 10, complete
             sequence
          Length = 196233

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 172   tcatattcagtttatactactgaa 195
             |||| |||||||||||||||||||
Sbjct: 53081 tcatgttcagtttatactactgaa 53058
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>gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, complete sequence
          Length = 222854

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    tgtcagtgagaccagagttccagg 70
             |||||||||| |||||||||||||
Sbjct: 53234 tgtcagtgagtccagagttccagg 53257
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>gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, complete sequence
          Length = 203281

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     tgtcagtgagaccagagttccagg 70
              |||||||||| |||||||||||||
Sbjct: 175844 tgtcagtgagtccagagttccagg 175867
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>emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097P24 on chromosome 20p11.21-12.3
            Contains a putative novel gene, ESTs, STSs and GSSs,
            complete sequence
          Length = 133072

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   ttccaggaataattatattt 83
            ||||||||||||||||||||
Sbjct: 8862 ttccaggaataattatattt 8843
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>emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section 5 of 21): from 813670 to
              1011078
          Length = 197409

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     gatattcagctgatcgctttttct 38
              ||||||||||||||| ||||||||
Sbjct: 170728 gatattcagctgatccctttttct 170751
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>emb|X96983.1|BS75DGREG B.subtilis chromosomal DNA (region 75 degrees: cspB upstream of
            glpPFKD operon)
          Length = 21808

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 15   gatattcagctgatcgctttttct 38
            ||||||||||||||| ||||||||
Sbjct: 5943 gatattcagctgatccctttttct 5966
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
              hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    cgtcaatgaggtccctgaaa 283
              ||||||||||||||||||||
Sbjct: 299898 cgtcaatgaggtccctgaaa 299917
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>gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 144160

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    tactgaaagacagctgccta 208
              ||||||||||||||||||||
Sbjct: 119814 tactgaaagacagctgccta 119833
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>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a
              component of oligomeric golgi complex 1 (Cog5) pseudogene
              and part of the Ptprd gene for receptor type protein
              tyrosine phosphatase D, complete sequence
          Length = 198523

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      atggtatatgatattcagct 25
              ||||||||||||||||||||
Sbjct: 177405 atggtatatgatattcagct 177386
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>emb|CR626863.4| Mouse DNA sequence from clone RP23-348H1 on chromosome 2, complete
             sequence
          Length = 42053

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ccagagttccaggaataatt 77
             ||||||||||||||||||||
Sbjct: 13169 ccagagttccaggaataatt 13188
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>dbj|AK133320.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932433A15 product:unclassifiable, full
            insert sequence
          Length = 2695

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   tgtcagtgagaccagagttccagg 70
            |||||||||| |||||||||||||
Sbjct: 1831 tgtcagtgagtccagagttccagg 1808
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>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence
          Length = 171415

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   tcagtttatactactgaaag 197
             ||||||||||||||||||||
Sbjct: 18541 tcagtttatactactgaaag 18560
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>gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, complete sequence
          Length = 194702

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     atataattcagtcttcagagaaaa 112
              |||||||||| |||||||||||||
Sbjct: 169344 atataattcattcttcagagaaaa 169321
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>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence
          Length = 247769

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aataattatatttcttctat 90
              ||||||||||||||||||||
Sbjct: 130376 aataattatatttcttctat 130395
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>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    gagaccagagttccaggaataatt 77
             ||||||||||||||||||| ||||
Sbjct: 90582 gagaccagagttccaggaacaatt 90559
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>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     taattcagtcttcagagaaaaaat 115
              ||||||| ||||||||||||||||
Sbjct: 141493 taattcactcttcagagaaaaaat 141470
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 72       ataattatatttcttctata 91
                ||||||||||||||||||||
Sbjct: 24297204 ataattatatttcttctata 24297185
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>gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complete sequence
          Length = 150573

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    atgaggtccctgaaaatgga 288
              ||||||||||||||||||||
Sbjct: 105291 atgaggtccctgaaaatgga 105310
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>gb|AC013414.7| Homo sapiens BAC clone RP11-560I3 from 2, complete sequence
          Length = 161390

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    tttcatctcatacaatgcat 362
              ||||||||||||||||||||
Sbjct: 151581 tttcatctcatacaatgcat 151600
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>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence
          Length = 150942

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aggaataattatatttcttc 87
             ||||||||||||||||||||
Sbjct: 85106 aggaataattatatttcttc 85125
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>gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a1) gene, partial cds,
             alternatively spliced
          Length = 25407

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   caatgaggtccctgaaaatg 286
             ||||||||||||||||||||
Sbjct: 18803 caatgaggtccctgaaaatg 18784
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046B10
          Length = 142596

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ataattatatttcttctata 91
              ||||||||||||||||||||
Sbjct: 121768 ataattatatttcttctata 121749
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ataattatatttcttctata 91
             ||||||||||||||||||||
Sbjct: 43108 ataattatatttcttctata 43089
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    ttcagtcttcagagaaaaaa 114
             ||||||||||||||||||||
Sbjct: 63481 ttcagtcttcagagaaaaaa 63462
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>dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G10, full
            insert sequence
          Length = 1127

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   ttcagtcttcagagaaaaaa 114
            ||||||||||||||||||||
Sbjct: 1068 ttcagtcttcagagaaaaaa 1087
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>gb|AC154369.1| Mus musculus BAC clone RP24-572H8 from 17, complete sequence
          Length = 165594

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   atgtccaaaatcatgccttg 315
             ||||||||||||||||||||
Sbjct: 79888 atgtccaaaatcatgccttg 79869
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>gb|U58859.1|BSU58859 Bacillus subtilis putative lipoprotein and cold shock protein CspB
            (cspB) genes, complete cds, and Orf1 gene, partial cds
          Length = 2200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 15   gatattcagctgatcgctttttct 38
            ||||||||||||||| ||||||||
Sbjct: 1273 gatattcagctgatccctttttct 1250
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>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7,
            complete sequence
          Length = 179577

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   atataattcagtcttcagagaaaa 112
            |||||||||||| |||||||||||
Sbjct: 2513 atataattcagtattcagagaaaa 2536
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>gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosome 8, complete sequence
          Length = 201346

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    aatgaggtccctgaaaatgg 287
              ||||||||||||||||||||
Sbjct: 142636 aatgaggtccctgaaaatgg 142655
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>gb|L17342.1|HEAHPAX Haemophilus parainfluenzae Valyl-tRNA synthetase (valS) gene, 3' end;
            HpaII very-short-patch-repair endonuclease (hpaIIV) gene,
            complete cds; HpaII modification methyltransferase
            (hpaIIM) gene, complete cds; HpaII restriction
            endonuclease (hpaIIR) ge
          Length = 4100

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  atgtccaaaatcatgccttg 315
            ||||||||||||||||||||
Sbjct: 3679 atgtccaaaatcatgccttg 3660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,923,983
Number of Sequences: 3902068
Number of extensions: 4923983
Number of successful extensions: 75656
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75504
Number of HSP's gapped (non-prelim): 152
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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