>gb|AE009406.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 176 of
            187 of the complete sequence
          Length = 11293

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 371  ccgcggatctccctcccgatcc 392
            ||||||||||||||||||||||
Sbjct: 5590 ccgcggatctccctcccgatcc 5569

>gb|AE008208.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 12 of
            187 of the complete sequence
          Length = 11069

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 371  ccgcggatctccctcccgatcc 392
            ||||||||||||||||||||||
Sbjct: 3549 ccgcggatctccctcccgatcc 3570

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 318     tctcccggatccggtccagctc 339
               ||||||||||||||||||||||
Sbjct: 6224045 tctcccggatccggtccagctc 6224024

>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 193    tcctcctccttccgggccagaacaa 217
              ||||||||||||| |||||||||||
Sbjct: 105517 tcctcctccttcctggccagaacaa 105493

>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence
          Length = 211657

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 193   tcctcctccttccgggccagaacaa 217
             ||||||||||||| |||||||||||
Sbjct: 11636 tcctcctccttcctggccagaacaa 11612

>gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, complete sequence
          Length = 197762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    ttctacattgtggacaatgaa 178
              |||||||||||||||||||||
Sbjct: 156288 ttctacattgtggacaatgaa 156268

>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 203546

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    ttctacattgtggacaatgaa 178
              |||||||||||||||||||||
Sbjct: 202983 ttctacattgtggacaatgaa 203003

>dbj|AK033877.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330107I06 product:unclassifiable, full
            insert sequence
          Length = 3361

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  ttctacattgtggacaatgaa 178
            |||||||||||||||||||||
Sbjct: 1079 ttctacattgtggacaatgaa 1059

>gb|AC153853.4| Mus musculus  BAC RP23-341J13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 194037

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   ttctacattgtggacaatgaa 178
             |||||||||||||||||||||
Sbjct: 60693 ttctacattgtggacaatgaa 60713

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    acatcttgctgctgttcaacatgt 245
              ||||| ||||||||||||||||||
Sbjct: 277651 acatcctgctgctgttcaacatgt 277628

>gb|AY441107.1| Armigeres subalbatus ASAP ID: 41845 putative: mitochondrial carrier
           mRNA sequence
          Length = 568

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 actgacagtcattttaagtt 126
           ||||||||||||||||||||
Sbjct: 154 actgacagtcattttaagtt 135

>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06,
              complete sequence
          Length = 142659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    taaaagttatcatttgccat 300
              ||||||||||||||||||||
Sbjct: 126347 taaaagttatcatttgccat 126328

>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgctgttcaacatgtccact 250
              ||||||||||||||||||||
Sbjct: 201660 tgctgttcaacatgtccact 201641

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     gatccggtccagctccagca 344
               ||||||||||||||||||||
Sbjct: 1543341 gatccggtccagctccagca 1543322

>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence
          Length = 183918

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    agcacatcttgctgctgttc 238
              ||||||||||||||||||||
Sbjct: 132693 agcacatcttgctgctgttc 132712

>ref|XM_759639.1| Theileria parva strain Muguga hypothetical protein (TP02_0168)
           partial mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 acatcttgctgctgttcaac 241
           ||||||||||||||||||||
Sbjct: 521 acatcttgctgctgttcaac 502

>emb|AL669856.6| Mouse DNA sequence from clone RP23-46I13 on chromosome 11 Contains part
             of the Slit 3 gene for slit homolog 3 (Drosophila), a
             novel gene and a ribosomal protein L21 (Rpl21) pseudogene,
             complete sequence
          Length = 264752

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ctacacttcctcctccttcc 205
             ||||||||||||||||||||
Sbjct: 10153 ctacacttcctcctccttcc 10172

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 320     tcccggatccggtccagctccagc 343
               ||||||||||||||||| ||||||
Sbjct: 1487430 tcccggatccggtccaggtccagc 1487407

>ref|NM_136370.1| Drosophila melanogaster CG15233-RA (CG15233), mRNA
          Length = 459

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 gccatcgtcatcgtcgccat 315
           ||||||||||||||||||||
Sbjct: 409 gccatcgtcatcgtcgccat 428

>gb|AY061138.1| Drosophila melanogaster LD11861 full length cDNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 gccatcgtcatcgtcgccat 315
           ||||||||||||||||||||
Sbjct: 524 gccatcgtcatcgtcgccat 543

>dbj|AK004870.2| Mus musculus adult male liver cDNA, RIKEN full-length enriched
            library, clone:1300003B13 product:similar to MSZF13
            (FRAGMENT) [Mus musculus], full insert sequence
          Length = 2925

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  acaggcaaagaaaccttaccaatg 152
            ||||| ||||||||||||||||||
Sbjct: 1975 acagggaaagaaaccttaccaatg 1998

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 281     taaaagttatcatttgccat 300
               ||||||||||||||||||||
Sbjct: 1813618 taaaagttatcatttgccat 1813599

>gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone
             BACR01C10, complete sequence
          Length = 173702

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gccatcgtcatcgtcgccat 315
             ||||||||||||||||||||
Sbjct: 58526 gccatcgtcatcgtcgccat 58507

>gb|AY111538.1| Zea mays CL39286_1 mRNA sequence
          Length = 586

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 ttctcccggatccggtccagctcc 340
           |||||| |||||||||||||||||
Sbjct: 387 ttctccaggatccggtccagctcc 410

>gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 of 73 of the complete
              sequence
          Length = 415717

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gccatcgtcatcgtcgccat 315
              ||||||||||||||||||||
Sbjct: 345394 gccatcgtcatcgtcgccat 345375

>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence
          Length = 215518

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   agcacatcttgctgctgttc 238
             ||||||||||||||||||||
Sbjct: 22945 agcacatcttgctgctgttc 22926

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 321     cccggatccggtccagctcc 340
               ||||||||||||||||||||
Sbjct: 2060156 cccggatccggtccagctcc 2060175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,172,803
Number of Sequences: 3902068
Number of extensions: 3172803
Number of successful extensions: 74099
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73913
Number of HSP's gapped (non-prelim): 186
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)