>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                            
Query: 264      gtatccaacaatttaacttggttcatgcttgcctcgtgcttactactttcctcccttatg 323
                ||||||||||||||| ||||||||| ||| || || |||||  ||||||| |||||||||
Sbjct: 13990865 gtatccaacaatttatcttggttcaggctagcttcatgctttttactttcttcccttatg 13990806

                                                                  
Query: 324      acccgcttgaagtttccaagctcaggggagtcctgaccatacaccatctt 373
                || || || |||||    ||||| | ||| |||| |||||||||||||||
Sbjct: 13990805 acacgtttaaagttagttagctccgcggactcctcaccatacaccatctt 13990756

>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12,
             from chromosome 3, complete sequence
          Length = 161676

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                         
Query: 264   gtatccaacaatttaacttggttcatgcttgcctcgtgcttactactttcctcccttatg 323
             ||||||||||||||| ||||||||| ||| || || |||||  ||||||| |||||||||
Sbjct: 20617 gtatccaacaatttatcttggttcaggctagcttcatgctttttactttcttcccttatg 20676

                                                               
Query: 324   acccgcttgaagtttccaagctcaggggagtcctgaccatacaccatctt 373
             || || || |||||    ||||| | ||| |||| |||||||||||||||
Sbjct: 20677 acacgtttaaagttagttagctccgcggactcctcaccatacaccatctt 20726

>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
           OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                       
Query: 264 gtatccaacaatttaacttggttcatgcttgcctcgtgcttactactttcctcccttatg 323
           ||||||||||||||| ||||||||| ||| || || |||||  ||||||| |||||||||
Sbjct: 544 gtatccaacaatttatcttggttcaggctagcttcatgctttttactttcttcccttatg 485

                                                             
Query: 324 acccgcttgaagtttccaagctcaggggagtcctgaccatacaccatctt 373
           || || || |||||    ||||| | ||| |||| |||||||||||||||
Sbjct: 484 acacgtttaaagttagttagctccgcggactcctcaccatacaccatctt 435

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                            
Query: 264      gtatccaacaatttaacttggttcatgcttgcctcgtgcttactactttcctcccttatg 323
                ||||||||||||||| ||||||||| ||| || || |||||  ||||||| |||||||||
Sbjct: 13985840 gtatccaacaatttatcttggttcaggctagcttcatgctttttactttcttcccttatg 13985781

                                                                  
Query: 324      acccgcttgaagtttccaagctcaggggagtcctgaccatacaccatctt 373
                || || || |||||    ||||| | ||| |||| |||||||||||||||
Sbjct: 13985780 acacgtttaaagttagttagctccgcggactcctcaccatacaccatctt 13985731

>dbj|AK099518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E03, full
           insert sequence
          Length = 1307

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                       
Query: 264 gtatccaacaatttaacttggttcatgcttgcctcgtgcttactactttcctcccttatg 323
           ||||||||||||||| ||||||||| ||| || || |||||  ||||||| |||||||||
Sbjct: 773 gtatccaacaatttatcttggttcaggctagcttcatgctttttactttcttcccttatg 714

                                                             
Query: 324 acccgcttgaagtttccaagctcaggggagtcctgaccatacaccatctt 373
           || || || |||||    ||||| | ||| |||| |||||||||||||||
Sbjct: 713 acacgtttaaagttagttagctccgcggactcctcaccatacaccatctt 664

>gb|BT018260.1| Zea mays clone EL01T0202B06.c mRNA sequence
          Length = 859

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 307 tactttcctcccttatgacccgcttgaagtttccaagctcaggggagtcctgaccataca 366
           |||||||||||||||| || |||||||| || |  || ||||  ||||| | ||||||||
Sbjct: 390 tactttcctcccttatcacacgcttgaaattactgagttcagcagagtcatcaccataca 331

                  
Query: 367 ccatctt 373
           |||||||
Sbjct: 330 ccatctt 324

>gb|AY106570.1| Zea mays PCO096184 mRNA sequence
          Length = 1228

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 307 tactttcctcccttatgacccgcttgaagtttccaagctcaggggagtcctgaccataca 366
           |||||||||||||||| || |||||||| || |  || ||||  ||||| | ||||||||
Sbjct: 772 tactttcctcccttatcacacgcttgaaattactgagttcagcagagtcatcaccataca 713

                  
Query: 367 ccatctt 373
           |||||||
Sbjct: 712 ccatctt 706

>emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chromosome 1, complete
              sequence
          Length = 153012

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 352    agtcctgaccatacaccatct 372
              |||||||||||||||||||||
Sbjct: 146579 agtcctgaccatacaccatct 146559

>emb|AL358783.7| Human DNA sequence from clone RP11-450I1 on chromosome 1 Contains the
            genes for two novel proteins (possible pseudogenes) and
            two pseudogenes similar to preferentially expressed
            antigen in melanoma (PRAME), complete sequence
          Length = 46650

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 352  agtcctgaccatacaccatct 372
            |||||||||||||||||||||
Sbjct: 8267 agtcctgaccatacaccatct 8247

>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six
              novel genes similar to preferentially expressed antigen in
              melanoma (PRAME), two novel genes, two preferentially
              expressed antigen in melanoma (PRAME) pseudogenes and a CpG
              island, complete sequence
          Length = 184591

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 352    agtcctgaccatacaccatct 372
              |||||||||||||||||||||
Sbjct: 171416 agtcctgaccatacaccatct 171396

>emb|AL355596.21| Human DNA sequence from clone RP11-63E9 on chromosome 6, complete
              sequence
          Length = 180778

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     ttctaaacaaagaacaaaccc 117
              |||||||||||||||||||||
Sbjct: 135192 ttctaaacaaagaacaaaccc 135212

>emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chromosome 1, complete
             sequence
          Length = 186712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   agtcctgaccatacaccatct 372
             |||||||||||||||||||||
Sbjct: 65153 agtcctgaccatacaccatct 65173

>gb|AC012262.15| Homo sapiens 3 BAC RP11-413C12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153860

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   cagaagaggattctacactta 147
             |||||||||||||||||||||
Sbjct: 58040 cagaagaggattctacactta 58060

>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     caaacccaactctgaacaga 90
              ||||||||||||||||||||
Sbjct: 196247 caaacccaactctgaacaga 196266

>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence
          Length = 173460

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    caaacccaactctgaacaga 90
             ||||||||||||||||||||
Sbjct: 17912 caaacccaactctgaacaga 17931

>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence
          Length = 224179

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gcagcaaagaacaaacccaa 79
              ||||||||||||||||||||
Sbjct: 107701 gcagcaaagaacaaacccaa 107682

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    agtgatgtactctacactcc 236
              ||||||||||||||||||||
Sbjct: 772851 agtgatgtactctacactcc 772832

>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    tccaagctcaggggagtcct 357
              ||||||||||||||||||||
Sbjct: 107827 tccaagctcaggggagtcct 107846

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 167      gtgagaattaggtaccagtatttg 190
                |||||||||| |||||||||||||
Sbjct: 42615858 gtgagaattatgtaccagtatttg 42615835

>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 167    gtgagaattaggtaccagtatttg 190
              |||||||||| |||||||||||||
Sbjct: 136741 gtgagaattatgtaccagtatttg 136718


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,106,323
Number of Sequences: 3902068
Number of extensions: 3106323
Number of successful extensions: 54506
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54420
Number of HSP's gapped (non-prelim): 79
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)