ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194798.1| Oryza sativa (japonica cultivar-group) putative... 163 6e-37
2dbj|AK069822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
3gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, c... 62 2e-06
4gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, c... 62 2e-06
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
7gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chrom... 44 0.40
8emb|AL365205.35| Human DNA sequence from clone RP11-298J23 on ch... 44 0.40
9gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, r... 44 0.40
10gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, r... 44 0.40
11gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10... 44 0.40
12gb|AC005641.1|AC005641 Drosophila melanogaster, chromosome 2R, r... 44 0.40
13emb|CR713940.2|CNS0GDTS Tetraodon nigroviridis full-length cDNA 42 1.6
14gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s... 42 1.6
15emb|AL390863.9| Human DNA sequence from clone RP11-239J11 on chr... 42 1.6
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19gb|AC024770.1| Caenorhabditis elegans cosmid Y39H10A, complete s... 40 6.2
20gb|BC074491.1| Xenopus laevis hypothetical protein LOC443717, mR... 40 6.2
21gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 6.2
22gb|AC145724.1| Pan troglodytes BAC clone RP43-22E12 from 7, comp... 40 6.2
23gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete s... 40 6.2
24gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 6.2
25emb|CR376769.6| Zebrafish DNA sequence from clone CH211-120K3 in... 40 6.2
26gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswel... 40 6.2
27dbj|AK095707.1| Homo sapiens cDNA FLJ38388 fis, clone FEBRA2004485 40 6.2
28gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell... 40 6.2
29gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, compl... 40 6.2
30gb|DQ366280.1| Boletellus shichianus isolate AFTOL-ID 532 RNA po... 40 6.2
31gb|DQ366279.1| Aureoboletus thibetanus isolate AFTOL-ID 450 RNA ... 40 6.2
32gb|AY513737.1| Oreochromis mossambicus Na-K-Cl cotransporter (NK... 40 6.2
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
34gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, comp... 40 6.2
35gb|AC009148.11| Homo sapiens chromosome 16 clone RP11-55K13, com... 40 6.2
36emb|AL954697.15| Zebrafish DNA sequence from clone CH211-286K11 ... 40 6.2
37dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16... 40 6.2 
>ref|NM_194798.1| Oryza sativa (japonica cultivar-group) putative alpha-mannosidase
            (OSJNBa0029P06.16), mRNA
          Length = 1317

 Score =  163 bits (82), Expect = 6e-37
 Identities = 187/222 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
            ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 1199 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 1140

                                                                        
Query: 273  aattccttgatagttctctttccaaacaattttttcagttcaacttttgccatcactgaa 332
            || || |||||  | |||||||||||||  ||| ||| |||||| |||||||| ||||||
Sbjct: 1139 aaatctttgattatcctctttccaaacagctttctcaattcaacctttgccattactgaa 1080

                                                                        
Query: 333  tattgtgggtcttctgcagcctgaaacaaatgtcccaagcggagaagtgtggtcccatca 392
            ||||||| ||| |||  ||||||||| | |||  |||| || || |||||||| ||||||
Sbjct: 1079 tattgtgtgtcctcttgagcctgaaaaagatgcgccaatcgaaggagtgtggtgccatca 1020

                                                      
Query: 393  tcgagattctgcaaggtgatgatcgcgacattatcaggaaga 434
            || ||| |||||||||||||||| || |||||||||||||||
Sbjct: 1019 tcaagactctgcaaggtgatgattgcaacattatcaggaaga 978
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>dbj|AK069822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027F12, full
            insert sequence
          Length = 3416

 Score =  163 bits (82), Expect = 6e-37
 Identities = 187/222 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
            ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 3129 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 3070

                                                                        
Query: 273  aattccttgatagttctctttccaaacaattttttcagttcaacttttgccatcactgaa 332
            || || |||||  | |||||||||||||  ||| ||| |||||| |||||||| ||||||
Sbjct: 3069 aaatctttgattatcctctttccaaacagctttctcaattcaacctttgccattactgaa 3010

                                                                        
Query: 333  tattgtgggtcttctgcagcctgaaacaaatgtcccaagcggagaagtgtggtcccatca 392
            ||||||| ||| |||  ||||||||| | |||  |||| || || |||||||| ||||||
Sbjct: 3009 tattgtgtgtcctcttgagcctgaaaaagatgcgccaatcgaaggagtgtggtgccatca 2950

                                                      
Query: 393  tcgagattctgcaaggtgatgatcgcgacattatcaggaaga 434
            || ||| |||||||||||||||| || |||||||||||||||
Sbjct: 2949 tcaagactctgcaaggtgatgattgcaacattatcaggaaga 2908
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>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence
          Length = 122319

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 213   ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
             ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 33662 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 33603

                        
Query: 273   aattccttgat 283
             || || |||||
Sbjct: 33602 aaatctttgat 33592



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 288   ctctttccaaacaattttttcagttcaacttttgccatcactgaatattgtg 339
             |||||||||||||  ||| ||| |||||| |||||||| |||||||||||||
Sbjct: 33453 ctctttccaaacagctttctcaattcaacctttgccattactgaatattgtg 33402



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 401   ctgcaaggtgatgatcgcgacattatcaggaaga 434
             ||||||||||||||| || |||||||||||||||
Sbjct: 33179 ctgcaaggtgatgattgcaacattatcaggaaga 33146
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>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence
          Length = 151533

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 213    ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
              ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 125195 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 125136

                         
Query: 273    aattccttgat 283
              || || |||||
Sbjct: 125135 aaatctttgat 125125



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                  
Query: 288    ctctttccaaacaattttttcagttcaacttttgccatcactgaatattgtg 339
              |||||||||||||  ||| ||| |||||| |||||||| |||||||||||||
Sbjct: 124986 ctctttccaaacagctttctcaattcaacctttgccattactgaatattgtg 124935



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 401    ctgcaaggtgatgatcgcgacattatcaggaaga 434
              ||||||||||||||| || |||||||||||||||
Sbjct: 124712 ctgcaaggtgatgattgcaacattatcaggaaga 124679
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                           
Query: 213     ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
               ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 2468463 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 2468404

                          
Query: 273     aattccttgat 283
               || || |||||
Sbjct: 2468403 aaatctttgat 2468393



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                   
Query: 288     ctctttccaaacaattttttcagttcaacttttgccatcactgaatattgtg 339
               |||||||||||||  ||| ||| |||||| |||||||| |||||||||||||
Sbjct: 2468254 ctctttccaaacagctttctcaattcaacctttgccattactgaatattgtg 2468203



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 401     ctgcaaggtgatgatcgcgacattatcaggaaga 434
               ||||||||||||||| || |||||||||||||||
Sbjct: 2467980 ctgcaaggtgatgattgcaacattatcaggaaga 2467947
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                           
Query: 213     ctccacttgagcttcctcatcgctgacttcttttggttggcggacaggttagtttcagtc 272
               ||||| ||||||||| ||||| |||||||||||||||| || || ||| |||| ||||||
Sbjct: 2468414 ctccaattgagcttcttcatctctgacttcttttggtttgcagataggctagtctcagtc 2468355

                          
Query: 273     aattccttgat 283
               || || |||||
Sbjct: 2468354 aaatctttgat 2468344



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                   
Query: 288     ctctttccaaacaattttttcagttcaacttttgccatcactgaatattgtg 339
               |||||||||||||  ||| ||| |||||| |||||||| |||||||||||||
Sbjct: 2468205 ctctttccaaacagctttctcaattcaacctttgccattactgaatattgtg 2468154



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 401     ctgcaaggtgatgatcgcgacattatcaggaaga 434
               ||||||||||||||| || |||||||||||||||
Sbjct: 2467931 ctgcaaggtgatgattgcaacattatcaggaaga 2467898
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>gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chromosome 6, complete
              sequence
          Length = 207116

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 13     gcatttgctcacagaaatgaaa 34
              ||||||||||||||||||||||
Sbjct: 181561 gcatttgctcacagaaatgaaa 181540
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>emb|AL365205.35| Human DNA sequence from clone RP11-298J23 on chromosome 6 Contains the
             5' end of the TFEB gene for transcription factor EB, the
             PGC gene for progastricsin, the FRS3 gene for fibroblast
             growth factor receptor substrate 3, the C6orf49 gene for
             chromosome 6 open reading frame 49, the 3' end of the
             USP49 gene for ubiquitin specific protease 49, the 3' end
             of a novel gene and 5 CpG islands, complete sequence
          Length = 106711

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 13    gcatttgctcacagaaatgaaa 34
             ||||||||||||||||||||||
Sbjct: 81215 gcatttgctcacagaaatgaaa 81194
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>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone
             BACR04H12, complete sequence
          Length = 175285

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 299   caattttttcagttcaactttt 320
             ||||||||||||||||||||||
Sbjct: 34384 caattttttcagttcaactttt 34363
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>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone
              BACR04G20, complete sequence
          Length = 184079

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 299    caattttttcagttcaactttt 320
              ||||||||||||||||||||||
Sbjct: 134891 caattttttcagttcaactttt 134870
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>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete
             sequence
          Length = 272100

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 299   caattttttcagttcaactttt 320
             ||||||||||||||||||||||
Sbjct: 24788 caattttttcagttcaactttt 24767
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>gb|AC005641.1|AC005641 Drosophila melanogaster, chromosome 2R, region 43D1-43D7, P1 clone
             DS03454, complete sequence
          Length = 50089

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 299   caattttttcagttcaactttt 320
             ||||||||||||||||||||||
Sbjct: 21984 caattttttcagttcaactttt 21963
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>emb|CR713940.2|CNS0GDTS Tetraodon nigroviridis full-length cDNA
          Length = 778

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 174 gtaactggggcgtgactactttcag 198
           |||||||||| ||||||||||||||
Sbjct: 1   gtaactggggagtgactactttcag 25
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>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence
          Length = 113210

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 295   caaacaattttttcagttcaacttt 319
             ||||||| |||||||||||||||||
Sbjct: 65025 caaacaactttttcagttcaacttt 65001
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>emb|AL390863.9| Human DNA sequence from clone RP11-239J11 on chromosome 1 Contains the
             5' end of the HRPT2 gene for hyperparathyroidism 2 (with
             jaw tumor), the B3GAL2 gene for UDP-Gal:betaGlcNAc beta
             1,3-galactosyltransferase polypeptide 2 and a CpG island,
             complete sequence
          Length = 122864

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    aacatgcatggaattacataa 73
             |||||||||||||||||||||
Sbjct: 19611 aacatgcatggaattacataa 19591
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 342      tcttctgcagcctgaaacaaa 362
                |||||||||||||||||||||
Sbjct: 37017826 tcttctgcagcctgaaacaaa 37017846
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1402_H07
          Length = 140620

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 342    tcttctgcagcctgaaacaaa 362
              |||||||||||||||||||||
Sbjct: 108130 tcttctgcagcctgaaacaaa 108150
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0683F02
          Length = 153388

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   tcttctgcagcctgaaacaaa 362
             |||||||||||||||||||||
Sbjct: 18967 tcttctgcagcctgaaacaaa 18987
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>gb|AC024770.1| Caenorhabditis elegans cosmid Y39H10A, complete sequence
          Length = 36751

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   attttttcagttcaactttt 320
             ||||||||||||||||||||
Sbjct: 16740 attttttcagttcaactttt 16721
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>gb|BC074491.1| Xenopus laevis hypothetical protein LOC443717, mRNA (cDNA clone
            IMAGE:6953116), partial cds
          Length = 2561

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  ttccaaacaattttttcagttcaa 315
            ||||||||| ||||||||||||||
Sbjct: 1067 ttccaaacacttttttcagttcaa 1090
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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 424     tatcaggaagaactgcatttgcat 447
               |||||||||||| |||||||||||
Sbjct: 1072682 tatcaggaagaattgcatttgcat 1072705
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>gb|AC145724.1| Pan troglodytes BAC clone RP43-22E12 from 7, complete sequence
          Length = 152426

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   gttctctttccaaacaattt 304
             ||||||||||||||||||||
Sbjct: 82152 gttctctttccaaacaattt 82171
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>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence
          Length = 106790

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   ttttttcagttcaacttttg 321
             ||||||||||||||||||||
Sbjct: 79395 ttttttcagttcaacttttg 79376
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 103     tcaccaagaatgttcttatctccatggg 130
               ||||||| ||||||| ||||||||||||
Sbjct: 2719031 tcaccaacaatgttcgtatctccatggg 2719058
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>emb|CR376769.6| Zebrafish DNA sequence from clone CH211-120K3 in linkage group 24,
             complete sequence
          Length = 56040

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   ttttttcagttcaacttttg 321
             ||||||||||||||||||||
Sbjct: 49339 ttttttcagttcaacttttg 49358
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>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 187437

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tttcagttcaacttttgcca 324
             ||||||||||||||||||||
Sbjct: 27803 tttcagttcaacttttgcca 27822
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>dbj|AK095707.1| Homo sapiens cDNA FLJ38388 fis, clone FEBRA2004485
          Length = 2984

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  ttccttgatagttctctttc 294
            ||||||||||||||||||||
Sbjct: 1875 ttccttgatagttctctttc 1856
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>gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156526

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    tttcagttcaacttttgcca 324
              ||||||||||||||||||||
Sbjct: 153959 tttcagttcaacttttgcca 153978
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>gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, complete sequence
          Length = 156539

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   gttctctttccaaacaattt 304
             ||||||||||||||||||||
Sbjct: 99423 gttctctttccaaacaattt 99404
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>gb|DQ366280.1| Boletellus shichianus isolate AFTOL-ID 532 RNA polymerase II second
           largest subunit (RPB2) gene, partial cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 ggctaccggtaactggggcg 185
           ||||||||||||||||||||
Sbjct: 197 ggctaccggtaactggggcg 216
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>gb|DQ366279.1| Aureoboletus thibetanus isolate AFTOL-ID 450 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 2174

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 ggctaccggtaactggggcg 185
           ||||||||||||||||||||
Sbjct: 215 ggctaccggtaactggggcg 234
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>gb|AY513737.1| Oreochromis mossambicus Na-K-Cl cotransporter (NKCC1alpha) mRNA,
            complete cds
          Length = 3954

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   cacagtttcaccaagaatgt 115
            ||||||||||||||||||||
Sbjct: 2390 cacagtttcaccaagaatgt 2409
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 435      actgcatttgcatccatcat 454
                ||||||||||||||||||||
Sbjct: 35214626 actgcatttgcatccatcat 35214645
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>gb|AC092139.5| Homo sapiens chromosome 16 clone RP11-391L3, complete sequence
          Length = 191731

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    ttccttgatagttctctttc 294
              ||||||||||||||||||||
Sbjct: 153295 ttccttgatagttctctttc 153314
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>gb|AC009148.11| Homo sapiens chromosome 16 clone RP11-55K13, complete sequence
          Length = 157518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ttccttgatagttctctttc 294
             ||||||||||||||||||||
Sbjct: 52414 ttccttgatagttctctttc 52433
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>emb|AL954697.15| Zebrafish DNA sequence from clone CH211-286K11 in linkage group 25,
              complete sequence
          Length = 134798

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    ttccaaacaattttttcagt 311
              ||||||||||||||||||||
Sbjct: 132122 ttccaaacaattttttcagt 132141
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   actgcatttgcatccatcat 454
             ||||||||||||||||||||
Sbjct: 26676 actgcatttgcatccatcat 26695
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    actgcatttgcatccatcat 454
              ||||||||||||||||||||
Sbjct: 109982 actgcatttgcatccatcat 110001
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>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
              sequence
          Length = 302417

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    tttcagttcaacttttgcca 324
              ||||||||||||||||||||
Sbjct: 100813 tttcagttcaacttttgcca 100832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,719,733
Number of Sequences: 3902068
Number of extensions: 4719733
Number of successful extensions: 89452
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89241
Number of HSP's gapped (non-prelim): 211
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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