ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl16b12 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 43.5 bits (101), Expect = 2e-04 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = -1 Query: 438 EKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADCS 325 +K C+ SC+V ++ E FG DPC V K L++EA CS Sbjct: 798 KKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS 835
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 43.1 bits (100), Expect = 3e-04 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C+ C+V+++ E FG DPCPG K LA+EA C Sbjct: 798 CVGQEFCSVNVAPEVFGGDPCPGTMKKLAVEAIC 831
>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)| (SUEL) Length = 105 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/39 (51%), Positives = 24/39 (61%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADCS 325 VE +C +SCTV S+ FG DPCPG K LA+ CS Sbjct: 66 VENSCEGKSSCTVLASNSVFG-DPCPGTAKYLAVTYICS 103
>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (CIRL-1) Length = 1515 Score = 33.5 bits (75), Expect = 0.24 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ DC Sbjct: 92 MSQRCNNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDC 128
>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) Length = 1472 Score = 33.5 bits (75), Expect = 0.24 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ DC Sbjct: 92 MSQRCNNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDC 128
>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin| receptor 1) (Lectomedin-2) (Fragment) Length = 1406 Score = 33.5 bits (75), Expect = 0.24 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ DC Sbjct: 32 MSQRCNNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDC 68
>LPHN1_HUMAN (O94910) Latrophilin-1 precursor (Calcium-independent| alpha-latrotoxin receptor 1) (Lectomedin-2) Length = 1474 Score = 33.5 bits (75), Expect = 0.24 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ DC Sbjct: 92 MSQRCNNRTQCVVVAGSDAF-PDPCPGTYKYLEVQYDC 128
>CU063_MOUSE (P58659) Protein C21orf63 homolog precursor| Length = 440 Score = 32.0 bits (71), Expect = 0.70 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N +C + ++ FG D CPG +K L + C Sbjct: 125 CQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKC 158
>CU063_PANTR (Q68US5) Protein C21orf63 homolog precursor| Length = 441 Score = 32.0 bits (71), Expect = 0.70 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N +C + ++ FG D CPG +K L + C Sbjct: 125 CQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKC 158
>CU063_HUMAN (P58658) Protein C21orf63 precursor (SUE21)| Length = 441 Score = 32.0 bits (71), Expect = 0.70 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N +C + ++ FG D CPG +K L + C Sbjct: 125 CQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKC 158
>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent| alpha-latrotoxin receptor 3) (Lectomedin-3) Length = 1447 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ +C Sbjct: 87 MSQRCNNRTQCAVVAGPDVF-PDPCPGTYKYLEVQYEC 123
>SAL_SILAS (Q9PVW8) Rhamnose-binding lectin precursor (SAL) (RBL) (Roe lectin)| Length = 308 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 V C ++++CT+ ++ FG DPCP K L I C Sbjct: 271 VAAGCDHLSTCTIPANNNFFG-DPCPNTYKYLRIVYAC 307
>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N C V + F DPCPG K L ++ +C Sbjct: 97 CNNRTQCVVVTGSDVF-PDPCPGTYKYLEVQYEC 129
>LPHN3_BOVIN (O97827) Latrophilin-3 precursor| Length = 1580 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -1 Query: 441 VEKACMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 + + C N C V + F DPCPG K L ++ +C Sbjct: 155 MSQRCNNRTQCAVVAGPDVF-PDPCPGTYKYLEVQYEC 191
>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (Latrophilin homolog 1) (Lectomedin-1) Length = 1459 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N C V + F DPCPG K L ++ +C Sbjct: 97 CNNRTQCIVVTGSDVF-PDPCPGTYKYLEVQYEC 129
>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) Length = 1478 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -1 Query: 429 CMNMNSCTVSLSDEGFGEDPCPGVTKTLAIEADC 328 C N C V + F DPCPG K L ++ +C Sbjct: 97 CNNRTQCIVVTGSDVF-PDPCPGTYKYLEVQYEC 129
>LIPA_TREDE (P61199) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)| (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) Length = 290 Score = 28.9 bits (63), Expect = 5.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +1 Query: 310 RIHRLRTVCFNGKCFGDARAW 372 +IH+L T+C +GKC W Sbjct: 36 KIHKLNTICTSGKCPNQGECW 56
>MUTS_TREPA (O83348) DNA mismatch repair protein mutS| Length = 900 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -2 Query: 227 VYSGY*PYAQMHCVSGSFIPNMATSSSHEQGI 132 + G P ++H SG F+PN T SS E + Sbjct: 586 ITGGRHPVVELHLPSGEFVPNDLTLSSSEHAV 617 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,479,390 Number of Sequences: 219361 Number of extensions: 1181670 Number of successful extensions: 3095 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3029 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3094 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
