>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score =  113 bits (57), Expect = 4e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                        
Query: 187  ctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaacttagg 246
            |||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  || 
Sbjct: 1387 ctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaacccaga 1328

                                                                        
Query: 247  gaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacgact 306
            |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| | |
Sbjct: 1327 gaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcaccagt 1268

                                     
Query: 307  gtaacaacagaaactccaacaataa 331
            | ||| |||||||||||||||||||
Sbjct: 1267 gcaaccacagaaactccaacaataa 1243

>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score =  113 bits (57), Expect = 4e-22
 Identities = 123/145 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187 ctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaacttagg 246
           |||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  || 
Sbjct: 573 ctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaacccaga 514

                                                                       
Query: 247 gaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacgact 306
           |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| | |
Sbjct: 513 gaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcaccagt 454

                                    
Query: 307 gtaacaacagaaactccaacaataa 331
           | ||| |||||||||||||||||||
Sbjct: 453 gcaaccacagaaactccaacaataa 429

>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 238  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 297
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 3524 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 3465

              
Query: 298  at 299
            ||
Sbjct: 3464 at 3463

>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full
            insert sequence
          Length = 1629

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 238  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 297
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 1183 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 1124

              
Query: 298  at 299
            ||
Sbjct: 1123 at 1122

>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10
          Length = 1772

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 220 ctgctcggtgtgtttcctgaa 240
           |||||||||||||||||||||
Sbjct: 22  ctgctcggtgtgtttcctgaa 42

>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence
          Length = 187416

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    taacaacagaaactccaacaa 328
              |||||||||||||||||||||
Sbjct: 153736 taacaacagaaactccaacaa 153756

>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 37     aaatattagtcaacaatggtacaaa 61
              |||||||||||||||||| ||||||
Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 238      gaacttagggaagtcattcctacagcgctctggtacaagtc 278
                |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 11023970 gaacctagggtagtcattcccacagcactttggtacaagtc 11024010

>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 238   gaacttagggaagtcattcctacagcgctctggtacaagtc 278
             |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 52852 gaacctagggtagtcattcccacagcactttggtacaagtc 52892

>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 238    gaacttagggaagtcattcctacagcgctctggtacaagtc 278
              |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 126812 gaacctagggtagtcattcccacagcactttggtacaagtc 126852

>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence
          Length = 200505

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    taacaacagaaactccaacaa 328
              |||||||||||||||||||||
Sbjct: 170731 taacaacagaaactccaacaa 170711

>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete
             sequence
          Length = 126358

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 220   ctgctcggtgtgtttcctgaa 240
             |||||||||||||||||||||
Sbjct: 11160 ctgctcggtgtgtttcctgaa 11140

>ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-containing protein
            (DDB0220518), partial mRNA
          Length = 9210

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  actgtaacaacagaaactccaaca 327
            ||||||||||||| ||||||||||
Sbjct: 8839 actgtaacaacagtaactccaaca 8862

>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ctttctcaatattgtcttcc 208
             ||||||||||||||||||||
Sbjct: 12002 ctttctcaatattgtcttcc 11983

>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ctttctcaatattgtcttcc 208
              ||||||||||||||||||||
Sbjct: 195772 ctttctcaatattgtcttcc 195753

>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    ggccctctttctcaatattg 202
              ||||||||||||||||||||
Sbjct: 150534 ggccctctttctcaatattg 150553

>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the
             5' end of the BTBD4 gene for BTB (POZ) domain containing
             4, part of a gene for a tissue plasminogen activator
             protein and two CpG islands, complete sequence
          Length = 41932

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   cctttctgctcggtgtgttt 234
             ||||||||||||||||||||
Sbjct: 12460 cctttctgctcggtgtgttt 12441

>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tacaaaatattagtcaacaa 52
              ||||||||||||||||||||
Sbjct: 131842 tacaaaatattagtcaacaa 131823

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      acaaaatattagtcaacaat 53
               ||||||||||||||||||||
Sbjct: 2555987 acaaaatattagtcaacaat 2555968

>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence
          Length = 151729

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 309   aacaacagaaactccaacaataaa 332
             ||||||||||||||||| ||||||
Sbjct: 21799 aacaacagaaactccaaaaataaa 21822

>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaatattagtcaacaatggt 56
             ||||||||||||||||||||
Sbjct: 59691 aaatattagtcaacaatggt 59710


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,086,178
Number of Sequences: 3902068
Number of extensions: 3086178
Number of successful extensions: 53115
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53047
Number of HSP's gapped (non-prelim): 68
length of query: 332
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 310
effective length of database: 17,147,199,772
effective search space: 5315631929320
effective search space used: 5315631929320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)