ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase) 28 4.9
2CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific cat... 28 4.9

>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)|
          Length = 750

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 211 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 101
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGV 264



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>CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific catalase)|
          Length = 744

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 211 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 101
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGV 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,877,489
Number of Sequences: 219361
Number of extensions: 671803
Number of successful extensions: 1613
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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