Clone Name | rbastl16b08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence Length = 202294 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 aataaaaatgtttttggatgaa 91 |||||||||||||||||||||| Sbjct: 56757 aataaaaatgtttttggatgaa 56736
>ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase/ kinase AT1G66980 mRNA, complete cds Length = 3512 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taaaaatgtttttggatgaa 91 |||||||||||||||||||| Sbjct: 3459 taaaaatgtttttggatgaa 3440
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 taaaaatgtttttggatgaa 91 |||||||||||||||||||| Sbjct: 27065 taaaaatgtttttggatgaa 27084
>emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 in linkage group 1, complete sequence Length = 121187 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ctccaaaaacttgcatcaga 197 |||||||||||||||||||| Sbjct: 30564 ctccaaaaacttgcatcaga 30545
>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence Length = 162949 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atgccgaggtgtaagagcat 121 |||||||||||||||||||| Sbjct: 107859 atgccgaggtgtaagagcat 107878
>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence Length = 184579 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atgccgaggtgtaagagcat 121 |||||||||||||||||||| Sbjct: 65374 atgccgaggtgtaagagcat 65393
>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12, complete sequence Length = 177468 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taaaaatgtttttggatgaa 91 |||||||||||||||||||| Sbjct: 161862 taaaaatgtttttggatgaa 161843
>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1, complete sequence Length = 130339 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ctccaaaaacttgcatcaga 197 |||||||||||||||||||| Sbjct: 100541 ctccaaaaacttgcatcaga 100560
>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence Length = 131867 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tttttggatgaaccaccagc 99 |||||||||||||||||||| Sbjct: 64488 tttttggatgaaccaccagc 64507
>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete sequence Length = 151493 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aataaaaatgtttttggatg 89 |||||||||||||||||||| Sbjct: 61609 aataaaaatgtttttggatg 61590 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,995,373 Number of Sequences: 3902068 Number of extensions: 1995373 Number of successful extensions: 134315 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134287 Number of HSP's gapped (non-prelim): 28 length of query: 223 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 201 effective length of database: 17,147,199,772 effective search space: 3446587154172 effective search space used: 3446587154172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)