ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 174 1e-40
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 174 1e-40
3dbj|AK067124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 1e-40
4ref|XM_475640.1| Oryza sativa (japonica cultivar-group), predic... 172 4e-40
5gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete seq... 96 8e-17
6gb|BT024128.1| Zea mays clone EL01N0449F01 mRNA sequence 88 2e-14
7gb|AY110775.1| Zea mays CL12999_1 mRNA sequence 78 2e-11
8gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 60 4e-06
9dbj|AK099713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
10gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete se... 48 0.017
11gb|AF332888.1|AF332888 Solanum dulcamara serine/threonine protei... 48 0.017
12gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosom... 44 0.26
13gb|BT016560.1| Zea mays clone Contig393 mRNA sequence 42 1.0
14emb|AL136084.11| Human DNA sequence from clone RP11-92C4 on chro... 42 1.0
15gb|AY107387.1| Zea mays PCO149313 mRNA sequence 42 1.0
16gb|AY104547.1| Zea mays PCO113533 mRNA sequence 42 1.0
17gb|AC159417.1| Trypanosoma brucei chromosome 8 clone RPCI93-25L8... 40 4.1
18gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O1... 40 4.1
19gb|AF220603.1| Lycopersicon esculentum VFNT Cherry Pto locus, co... 40 4.1
20gb|AF220602.1| Lycopersicon pimpinellifolium Rio Grande 76R Pto ... 40 4.1
21gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 4.1
22ref|XM_423449.1| PREDICTED: Gallus gallus similar to ATP-binding... 40 4.1
23gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequ... 40 4.1
24gb|AY386696.1| Oryctolagus cuniculus clone 27N5, complete sequence 40 4.1
25ref|XM_818508.1| Trypanosoma brucei TREU927 clone RPCI93-12O16 h... 40 4.1
26ref|XM_818816.1| Trypanosoma brucei TREU927 clone RPCI93-25L8 hy... 40 4.1
27gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, comple... 40 4.1
28gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, comp... 40 4.1
29gb|AY316967.1| Capsicum chinense clone CchiPto9 Pto-like serine/... 40 4.1
30gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 4.1
31gb|AC026512.6| Homo sapiens chromosome 15, clone RP11-375D9, com... 40 4.1
32gb|AF318493.1|AF318493 Lycopersicon hirsutum Pto-like protein ki... 40 4.1
33gb|AF318492.1|AF318492 Lycopersicon hirsutum Pto-like protein ki... 40 4.1
34gb|U13923.1|LEU13923 Lycopersicon pimpinellifolium serine/threon... 40 4.1
35gb|U59317.1|LPU59317 Lycopersicon pimpinellifolium serine/threon... 40 4.1
36gb|U59318.1|LEU59318 Lycopersicon esculentum serine/threonine pr... 40 4.1

>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  174 bits (88), Expect = 1e-40
 Identities = 214/256 (83%)
 Strand = Plus / Minus

                                                                         
Query: 38    ttcacctcccttcagtgttcatcagctgcgagaaggcatcgttggtcgacatctgagagt 97
             ||||||||||||| ||||| |||||||| ||||||||||   |||| |||||||||||||
Sbjct: 35484 ttcacctcccttctgtgttgatcagctgtgagaaggcattactggttgacatctgagagt 35425

                                                                         
Query: 98    aatccatgtttgtggggctttcgtctgcggtgccaatctccagagagcccatccttctgg 157
             | ||||||   ||  ||||||| ||||| ||||  |||||||| ||||  |||||   ||
Sbjct: 35424 agtccatggccgttcggctttcatctgcagtgctgatctccagggagcttatcctctggg 35365

                                                                         
Query: 158   tgtccggaggaagttcagagatctgattcatgctgtcaacattggagacgtccgggccgg 217
               |  | ||| ||||||||||||||||||||||| ||||  ||||| | ||||||||| |
Sbjct: 35364 catttgaagggagttcagagatctgattcatgctatcaatgttggacatgtccgggcctg 35305

                                                                         
Query: 218   cctcctgcagctggagcacaaactccagattccacaggacatcacccatggtagggcggt 277
             |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 35304 cctcctgcagctggagcacaaactccaggttccacaggacatctcccatcgtaggccgtt 35245

                             
Query: 278   caacgccgtaatccgc 293
             | |||||||| |||||
Sbjct: 35244 cgacgccgtactccgc 35229



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  174 bits (88), Expect = 1e-40
 Identities = 214/256 (83%)
 Strand = Plus / Minus

                                                                           
Query: 38      ttcacctcccttcagtgttcatcagctgcgagaaggcatcgttggtcgacatctgagagt 97
               ||||||||||||| ||||| |||||||| ||||||||||   |||| |||||||||||||
Sbjct: 3613137 ttcacctcccttctgtgttgatcagctgtgagaaggcattactggttgacatctgagagt 3613078

                                                                           
Query: 98      aatccatgtttgtggggctttcgtctgcggtgccaatctccagagagcccatccttctgg 157
               | ||||||   ||  ||||||| ||||| ||||  |||||||| ||||  |||||   ||
Sbjct: 3613077 agtccatggccgttcggctttcatctgcagtgctgatctccagggagcttatcctctggg 3613018

                                                                           
Query: 158     tgtccggaggaagttcagagatctgattcatgctgtcaacattggagacgtccgggccgg 217
                 |  | ||| ||||||||||||||||||||||| ||||  ||||| | ||||||||| |
Sbjct: 3613017 catttgaagggagttcagagatctgattcatgctatcaatgttggacatgtccgggcctg 3612958

                                                                           
Query: 218     cctcctgcagctggagcacaaactccagattccacaggacatcacccatggtagggcggt 277
               |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 3612957 cctcctgcagctggagcacaaactccaggttccacaggacatctcccatcgtaggccgtt 3612898

                               
Query: 278     caacgccgtaatccgc 293
               | |||||||| |||||
Sbjct: 3612897 cgacgccgtactccgc 3612882



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 219      ctcctgcagctggagcacaaactccagattccacaggacatcacccatgg 268
                |||||||||||||||| ||||||| || ||||| || |||||||||||||
Sbjct: 14662600 ctcctgcagctggagcgcaaactcgaggttccagagcacatcacccatgg 14662649



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 219      ctcctgcagctggagcacaaactccagattccacaggacatcacccatgg 268
                |||||||||||| ||  ||| ||| || ||||||||||||||||||||||
Sbjct: 14651679 ctcctgcagctgtagtgcaacctcgaggttccacaggacatcacccatgg 14651728



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>dbj|AK067124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L04, full
           insert sequence
          Length = 1216

 Score =  174 bits (88), Expect = 1e-40
 Identities = 214/256 (83%)
 Strand = Plus / Minus

                                                                       
Query: 38  ttcacctcccttcagtgttcatcagctgcgagaaggcatcgttggtcgacatctgagagt 97
           ||||||||||||| ||||| |||||||| ||||||||||   |||| |||||||||||||
Sbjct: 998 ttcacctcccttctgtgttgatcagctgtgagaaggcattactggttgacatctgagagt 939

                                                                       
Query: 98  aatccatgtttgtggggctttcgtctgcggtgccaatctccagagagcccatccttctgg 157
           | ||||||   ||  ||||||| ||||| ||||  |||||||| ||||  |||||   ||
Sbjct: 938 agtccatggccgttcggctttcatctgcagtgctgatctccagggagcttatcctctggg 879

                                                                       
Query: 158 tgtccggaggaagttcagagatctgattcatgctgtcaacattggagacgtccgggccgg 217
             |  | ||| ||||||||||||||||||||||| ||||  ||||| | ||||||||| |
Sbjct: 878 catttgaagggagttcagagatctgattcatgctatcaatgttggacatgtccgggcctg 819

                                                                       
Query: 218 cctcctgcagctggagcacaaactccagattccacaggacatcacccatggtagggcggt 277
           |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 818 cctcctgcagctggagcacaaactccaggttccacaggacatctcccatcgtaggccgtt 759

                           
Query: 278 caacgccgtaatccgc 293
           | |||||||| |||||
Sbjct: 758 cgacgccgtactccgc 743



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>ref|XM_475640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2529

 Score =  172 bits (87), Expect = 4e-40
 Identities = 213/255 (83%)
 Strand = Plus / Minus

                                                                        
Query: 39   tcacctcccttcagtgttcatcagctgcgagaaggcatcgttggtcgacatctgagagta 98
            |||||||||||| ||||| |||||||| ||||||||||   |||| ||||||||||||||
Sbjct: 2529 tcacctcccttctgtgttgatcagctgtgagaaggcattactggttgacatctgagagta 2470

                                                                        
Query: 99   atccatgtttgtggggctttcgtctgcggtgccaatctccagagagcccatccttctggt 158
             ||||||   ||  ||||||| ||||| ||||  |||||||| ||||  |||||   || 
Sbjct: 2469 gtccatggccgttcggctttcatctgcagtgctgatctccagggagcttatcctctgggc 2410

                                                                        
Query: 159  gtccggaggaagttcagagatctgattcatgctgtcaacattggagacgtccgggccggc 218
             |  | ||| ||||||||||||||||||||||| ||||  ||||| | ||||||||| ||
Sbjct: 2409 atttgaagggagttcagagatctgattcatgctatcaatgttggacatgtccgggcctgc 2350

                                                                        
Query: 219  ctcctgcagctggagcacaaactccagattccacaggacatcacccatggtagggcggtc 278
            ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 2349 ctcctgcagctggagcacaaactccaggttccacaggacatctcccatcgtaggccgttc 2290

                           
Query: 279  aacgccgtaatccgc 293
             |||||||| |||||
Sbjct: 2289 gacgccgtactccgc 2275



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>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence
          Length = 70712

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 169   agttcagagatctgattcatgctgtcaacattggagacgtccgggccggcctcctgcagc 228
             |||||||||||||||||||| ||||| |  ||||| | ||| || || |||||||| |||
Sbjct: 43879 agttcagagatctgattcatactgtcgatgttggacatgtctggacctgcctcctgtagc 43938

                                                         
Query: 229   tggagcacaaactccagattccacaggacatcacccatggtagg 272
             || |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 43939 tgcagcacaaactccaggttccacagcacatcacccattgtagg 43982



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>gb|BT024128.1| Zea mays clone EL01N0449F01 mRNA sequence
          Length = 1401

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 169  agttcagagatctgattcatgctgtcaacattggagacgtccgggccggcctcctgcagc 228
            |||||||||||||||||||| ||||  |  ||||| | ||| || || ||||||||||||
Sbjct: 1057 agttcagagatctgattcatactgttgatgttggacatgtctggacctgcctcctgcagc 998

                                                        
Query: 229  tggagcacaaactccagattccacaggacatcacccatggtagg 272
            || |||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 997  tgcagcacaaactccaggttccacagcacatcccccatagtagg 954



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 23   aacaattctgtccagttcacctcccttcagtgttcatcagctgcgagaaggc 74
            ||||||||| |||||||||||| ||||| |  || || ||||||||||||||
Sbjct: 1203 aacaattctatccagttcaccttccttctgcattgattagctgcgagaaggc 1152



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>gb|AY110775.1| Zea mays CL12999_1 mRNA sequence
          Length = 625

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 agttcagagatctgattcatgctgtcaacattggagacgtccgggccggcctcctgcagc 228
           |||||||||||||||||||| ||||  |  ||||| | ||| || || ||||||||||||
Sbjct: 330 agttcagagatctgattcatactgttgatgttggacatgtctggacctgcctcctgcagc 389

                                          
Query: 229 tggagcacaaactccagattccacaggacat 259
           || |||||||||||||| |||||||| ||||
Sbjct: 390 tgcagcacaaactccaggttccacagcacat 420



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 23  aacaattctgtccagttcacctcccttcagtgttcatcagctgcgagaaggc 74
           ||||||||| |||||||||||| ||||| |  || || ||||||||||||||
Sbjct: 184 aacaattctatccagttcaccttccttctgcattgattagctgcgagaaggc 235



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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0059K16, complete sequence
          Length = 139615

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 219   ctcctgcagctggagcacaaactccagattccacaggacatcacccatgg 268
             |||||||||||||||| ||||||| || ||||| || |||||||||||||
Sbjct: 78894 ctcctgcagctggagcgcaaactcgaggttccagagcacatcacccatgg 78943



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 219   ctcctgcagctggagcacaaactccagattccacaggacatcacccatgg 268
             |||||||||||| ||  ||| ||| || ||||||||||||||||||||||
Sbjct: 67973 ctcctgcagctgtagtgcaacctcgaggttccacaggacatcacccatgg 68022



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>dbj|AK099713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084B13, full
            insert sequence
          Length = 4389

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 219  ctcctgcagctggagcacaaactccagattccacaggacatcacccatgg 268
            |||||||||||| ||  ||| ||| || ||||||||||||||||||||||
Sbjct: 3947 ctcctgcagctgtagtgcaacctcgaggttccacaggacatcacccatgg 3898



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>gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete sequence
          Length = 103543

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 244   agattccacaggacatcacccatggtagggcg 275
             ||||||||||| ||||||||||||| ||||||
Sbjct: 45743 agattccacagcacatcacccatggaagggcg 45712



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>gb|AF332888.1|AF332888 Solanum dulcamara serine/threonine protein kinase pseudogene,
           partial sequence
          Length = 1277

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 239 actccagattccacaggacatcacccat 266
           |||||||||||||||| |||||||||||
Sbjct: 887 actccagattccacagcacatcacccat 860



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>gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosome 13, complete sequence
          Length = 189739

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 4      gcttccttggtgacacagaaac 25
              ||||||||||||||||||||||
Sbjct: 110045 gcttccttggtgacacagaaac 110066



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>gb|BT016560.1| Zea mays clone Contig393 mRNA sequence
          Length = 747

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 212 ggccggcctcctgcagctgga 232
           |||||||||||||||||||||
Sbjct: 201 ggccggcctcctgcagctgga 181



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>emb|AL136084.11| Human DNA sequence from clone RP11-92C4 on chromosome 9q22.33-31.3
              Contains the GALNT12 gene for
              UDP-N-acetyl-alpha-D-galactosamine:polypeptide
              N-acetylgalactosaminyltransferase 12 (GalNAc-T12), the 5'
              end of the COL15A1 gene for collagen type XV, alpha 1, a
              novel gene, a non-metastatic cells 2, protein (NM23B)
              expressed in (NME2) pseudogene and a CpG island, complete
              sequence
          Length = 149930

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 21     gaaacaattctgtccagttcacctc 45
              ||||||||||||||||| |||||||
Sbjct: 103585 gaaacaattctgtccagctcacctc 103561



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>gb|AY107387.1| Zea mays PCO149313 mRNA sequence
          Length = 1336

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 238 aactccagattccacaggacatcacccatggtagggcggtc 278
           |||||||| ||||| || ||||||||||| | |||||||||
Sbjct: 839 aactccaggttccagagcacatcacccatcgaagggcggtc 799



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>gb|AY104547.1| Zea mays PCO113533 mRNA sequence
          Length = 927

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 212 ggccggcctcctgcagctgga 232
           |||||||||||||||||||||
Sbjct: 282 ggccggcctcctgcagctgga 262



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>gb|AC159417.1| Trypanosoma brucei chromosome 8 clone RPCI93-25L8, complete sequence
          Length = 36265

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 231   gagcacaaactccagattccacag 254
             ||||||||||||||| ||||||||
Sbjct: 11444 gagcacaaactccagcttccacag 11467



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 231  gagcacaaactccagattccacag 254
            ||||||||||||||| ||||||||
Sbjct: 1017 gagcacaaactccagcttccacag 1040



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>gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O16, complete sequence
          Length = 161249

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    gagcacaaactccagattccacag 254
              ||||||||||||||| ||||||||
Sbjct: 159606 gagcacaaactccagcttccacag 159629



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    gagcacaaactccagattccacag 254
              ||||||||||||||| ||||||||
Sbjct: 149179 gagcacaaactccagcttccacag 149202



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>gb|AF220603.1| Lycopersicon esculentum VFNT Cherry Pto locus, complete sequence
          Length = 59202

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 239   actccagattccacaggacatcacccat 266
             ||||||| |||||||| |||||||||||
Sbjct: 44217 actccagtttccacagcacatcacccat 44244



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 239   actccagattccacaggacatcacccat 266
             ||||||| |||||||| |||||||||||
Sbjct: 26361 actccagtttccacagcacatcacccat 26388



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>gb|AF220602.1| Lycopersicon pimpinellifolium Rio Grande 76R Pto locus, complete
             sequence
          Length = 60831

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 239   actccagattccacaggacatcacccat 266
             ||||||| |||||||| |||||||||||
Sbjct: 48503 actccagtttccacagcacatcacccat 48530



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 239   actccagattccacaggacatcacccat 266
             ||||||| |||||||| |||||||||||
Sbjct: 28125 actccagtttccacagcacatcacccat 28152



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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    gagcacaaactccagattccacag 254
              ||||||||||||||| ||||||||
Sbjct: 298326 gagcacaaactccagcttccacag 298349



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    gagcacaaactccagattccacag 254
              ||||||||||||||| ||||||||
Sbjct: 287899 gagcacaaactccagcttccacag 287922



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>ref|XM_423449.1| PREDICTED: Gallus gallus similar to ATP-binding cassette,
           sub-family B, member 6, mitochondrial precursor
           (Mitochondrial ABC transporter 3) (Mt-ABC transporter 3)
           (ABC transporter umat) (LOC425721), partial mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 cctcctgcagctggagcaca 237
           ||||||||||||||||||||
Sbjct: 351 cctcctgcagctggagcaca 370



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>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence
          Length = 146274

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 244    agattccacaggacatcacccatggtagggcg 275
              ||||||||||| ||||||||||| | ||||||
Sbjct: 112985 agattccacagcacatcacccatcgaagggcg 113016



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>gb|AY386696.1| Oryctolagus cuniculus clone 27N5, complete sequence
          Length = 146676

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gggccggcctcctgcagctg 230
              ||||||||||||||||||||
Sbjct: 114412 gggccggcctcctgcagctg 114393



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   gggccggcctcctgcagctg 230
             ||||||||||||||||||||
Sbjct: 76614 gggccggcctcctgcagctg 76595



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>ref|XM_818508.1| Trypanosoma brucei TREU927 clone RPCI93-12O16 hypothetical protein
           (Tb927.8.930) partial mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gagcacaaactccagattccacag 254
           ||||||||||||||| ||||||||
Sbjct: 609 gagcacaaactccagcttccacag 586



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>ref|XM_818816.1| Trypanosoma brucei TREU927 clone RPCI93-25L8 hypothetical protein
           (Tb927.8.950) partial mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 gagcacaaactccagattccacag 254
           ||||||||||||||| ||||||||
Sbjct: 609 gagcacaaactccagcttccacag 586



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>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence
          Length = 208678

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   gctggagcacaaactccaga 246
             ||||||||||||||||||||
Sbjct: 41093 gctggagcacaaactccaga 41112



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>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence
          Length = 210347

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   gctggagcacaaactccaga 246
             ||||||||||||||||||||
Sbjct: 13409 gctggagcacaaactccaga 13390



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>gb|AY316967.1| Capsicum chinense clone CchiPto9 Pto-like serine/threonine
           kinase-like mRNA, partial sequence
          Length = 1237

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 239 actccagattccacaggacatcacccat 266
           |||||||| ||||||| |||||||||||
Sbjct: 886 actccagactccacagtacatcacccat 859



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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      agaaggcatcgttggtcgac 87
               ||||||||||||||||||||
Sbjct: 1780378 agaaggcatcgttggtcgac 1780359



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>gb|AC026512.6| Homo sapiens chromosome 15, clone RP11-375D9, complete sequence
          Length = 90707

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   gacatcacccatggtagggc 274
             ||||||||||||||||||||
Sbjct: 41732 gacatcacccatggtagggc 41751



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>gb|AF318493.1|AF318493 Lycopersicon hirsutum Pto-like protein kinase D (LhirPtoD) mRNA,
           complete cds
          Length = 972

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 239 actccagattccacaggacatcacccat 266
           ||||||| |||||||| |||||||||||
Sbjct: 925 actccagtttccacagcacatcacccat 898



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>gb|AF318492.1|AF318492 Lycopersicon hirsutum Pto-like protein kinase B (LhirPtoB) mRNA,
           complete cds
          Length = 963

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 239 actccagattccacaggacatcacccat 266
           ||||||| |||||||| |||||||||||
Sbjct: 916 actccagtttccacagcacatcacccat 889



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>gb|U13923.1|LEU13923 Lycopersicon pimpinellifolium serine/threonine protein kinase (Fen)
           mRNA, complete cds
          Length = 957

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 239 actccagattccacaggacatcacccat 266
           ||||||| |||||||| |||||||||||
Sbjct: 910 actccagtttccacagcacatcacccat 883



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>gb|U59317.1|LPU59317 Lycopersicon pimpinellifolium serine/threonine protein kinase Fen
            (Fen) gene, complete cds
          Length = 1481

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 239  actccagattccacaggacatcacccat 266
            ||||||| |||||||| |||||||||||
Sbjct: 1167 actccagtttccacagcacatcacccat 1140



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>gb|U59318.1|LEU59318 Lycopersicon esculentum serine/threonine protein kinase fen (fen)
            gene, complete cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 239  actccagattccacaggacatcacccat 266
            ||||||| |||||||| |||||||||||
Sbjct: 1175 actccagtttccacagcacatcacccat 1148


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,430,404
Number of Sequences: 3902068
Number of extensions: 2430404
Number of successful extensions: 47348
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47242
Number of HSP's gapped (non-prelim): 104
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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