ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete ... 46 0.030
2gb|AC107312.9| Homo sapiens 3 BAC RP11-574E7 (Roswell Park Cance... 44 0.12
3emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4,... 44 0.12
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
5gb|AY104777.1| Zea mays PCO062010 mRNA sequence 44 0.12
6emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.12
7emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.12
8emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in... 44 0.12
9emb|AL109931.18|HSDJ719K3 Human DNA sequence from clone RP4-719K... 42 0.47
10gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complet... 42 0.47
11gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, comple... 42 0.47
12ref|XM_640078.1| Dictyostelium discoideum hypothetical protein (... 40 1.8
13ref|XM_415886.1| PREDICTED: Gallus gallus similar to KIAA1287 pr... 40 1.8
14ref|NM_001030722.1| Gallus gallus integrator complex subunit 2 (... 40 1.8
15gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosom... 40 1.8
16gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete s... 40 1.8
17emb|AJ719990.1| Gallus gallus mRNA for hypothetical protein, clo... 40 1.8
18emb|CR392347.5| Zebrafish DNA sequence from clone DKEY-37G12 in ... 40 1.8
19emb|CR522900.1| Gallus gallus finished cDNA, clone ChEST396a11 40 1.8
20gb|AC114265.2| Dictyostelium discoideum chromosome 2 map 4520461... 40 1.8
21emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in... 40 1.8
22emb|AL954136.13| Zebrafish DNA sequence from clone CH211-220E11,... 40 1.8
23emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromo... 40 1.8
24emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chro... 40 1.8
25gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosom... 38 7.3
26gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome ... 38 7.3
27gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 sect... 38 7.3
28gb|U61944.1| Caenorhabditis elegans cosmid T12E12, complete sequ... 38 7.3
29gb|AC150593.2| Bos taurus BAC CH240-105D16 (Children's Hospital... 38 7.3
30gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, co... 38 7.3
31gb|AE009952.1| Yersinia pestis KIM, complete genome 38 7.3
32gb|AC006830.2| Caenorhabditis elegans cosmid ZK105, complete seq... 38 7.3
33gb|AC006835.1| Caenorhabditis elegans cosmid ZK993, complete seq... 38 7.3
34emb|AL132859.1|CEY39C12A Caenorhabditis elegans YAC Y39C12A, com... 38 7.3
35emb|AL032651.1|CEY6D1A Caenorhabditis elegans YAC Y6D1A, complet... 38 7.3
36emb|Z98866.1|CEY49E10 Caenorhabditis elegans YAC Y49E10, complet... 38 7.3
37emb|AL023828.1|CEY17G7B Caenorhabditis elegans YAC Y17G7B, compl... 38 7.3
38ref|XM_725495.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 7.3
39ref|XM_737825.1| Plasmodium chabaudi chabaudi hypothetical prote... 38 7.3
40gb|U55365.1| Caenorhabditis elegans cosmid C12D5, complete sequence 38 7.3
41emb|AL603902.4| Human DNA sequence from clone RP11-167I10 on chr... 38 7.3
42emb|AL450083.11| Human DNA sequence from clone RP11-514P7 on chr... 38 7.3
43emb|AL354977.10| Human DNA sequence from clone RP11-509J21 on ch... 38 7.3
44emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 38 7.3
45emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; seg... 38 7.3
46gb|AF494279.1| Chaetosphaeridium globosum mitochondrial DNA, com... 38 7.3
47gb|AC108221.4| Homo sapiens BAC clone RP11-783P19 from 4, comple... 38 7.3
48gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map... 38 7.3
49gb|AC100767.2| Homo sapiens chromosome 11, clone RP11-787P24, co... 38 7.3
50gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K... 38 7.3
51ref|XM_625419.1| Cryptosporidium parvum Iowa II hypothetical pro... 38 7.3
52gb|AC021850.8|AC021850 Homo sapiens BAC clone RP11-389E17 from 4... 38 7.3
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.3
54gb|AC009054.8| Homo sapiens chromosome 16 clone RP11-252K23, com... 38 7.3
55gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complet... 38 7.3
56gb|AC068999.15|AC068999 Homo sapiens chromosome 18 clone RP11-70... 38 7.3
57gb|AC009804.2| Homo sapiens 12 BAC RP11-411G2 (Roswell Park Canc... 38 7.3
58gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Canc... 38 7.3
59gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Can... 38 7.3
60gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 38 7.3
61gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 38 7.3
62gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence 38 7.3
63gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer ... 38 7.3
64gb|AF538044.1| Amoebidium parasiticum mitochondrial chromosome 0... 38 7.3
65dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 38 7.3
66dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic D... 38 7.3
67gb|AC153521.7| Mus musculus 10 BAC RP23-292G15 (Roswell Park Can... 38 7.3
68dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.3
69emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on ch... 38 7.3
70gb|AC006608.2| Caenorhabditis elegans cosmid C15F1, complete seq... 38 7.3
71emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, compl... 38 7.3
72emb|Z81589.1|CET08G5 Caenorhabditis elegans Cosmid T08G5, comple... 38 7.3
73gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, c... 38 7.3
74gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, comp... 38 7.3
75dbj|AP005208.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 7.3
76gb|DQ132803.1| Oryzias latipes LRH-1 mRNA, complete cds 38 7.3
77emb|Z92781.1|CEF09C3 Caenorhabditis elegans Cosmid F09C3, comple... 38 7.3
78emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, compl... 38 7.3
79emb|Z81519.1|CEF29C12 Caenorhabditis elegans Cosmid F29C12, comp... 38 7.3
80dbj|AP004529.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 7.3
81gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, com... 38 7.3 
>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence
          Length = 132558

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 76     aataaattttggaatattttatt 98
              |||||||||||||||||||||||
Sbjct: 129607 aataaattttggaatattttatt 129629



 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 76     aataaattttggaatattttatt 98
              |||||||||||||||||||||||
Sbjct: 129206 aataaattttggaatattttatt 129184
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>gb|AC107312.9| Homo sapiens 3 BAC RP11-574E7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138925

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 76     aataaattttggaatattttattcca 101
              |||||| |||||||||||||||||||
Sbjct: 121925 aataaaatttggaatattttattcca 121900
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>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
             complete sequence
          Length = 144670

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 48    taaacaatttactagtttgcat 69
             ||||||||||||||||||||||
Sbjct: 71118 taaacaatttactagtttgcat 71139
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 48       taaacaatttactagtttgcat 69
                ||||||||||||||||||||||
Sbjct: 35134615 taaacaatttactagtttgcat 35134636
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>gb|AY104777.1| Zea mays PCO062010 mRNA sequence
          Length = 1069

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  actaacaagtagtacaactcat 41
           ||||||||||||||||||||||
Sbjct: 952 actaacaagtagtacaactcat 931
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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 48    taaacaatttactagtttgcat 69
             ||||||||||||||||||||||
Sbjct: 89688 taaacaatttactagtttgcat 89709
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
            sequence
          Length = 82895

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 48   taaacaatttactagtttgcat 69
            ||||||||||||||||||||||
Sbjct: 3515 taaacaatttactagtttgcat 3536
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>emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in linkage group 1,
            complete sequence
          Length = 120721

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 75   taataaattttggaatattttattcc 100
            |||||| |||||||||||||||||||
Sbjct: 8708 taataatttttggaatattttattcc 8733
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>emb|AL109931.18|HSDJ719K3 Human DNA sequence from clone RP4-719K3 on chromosome Xq21.1-21.31,
             complete sequence
          Length = 81851

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    ctaataaattttggaatattt 94
             |||||||||||||||||||||
Sbjct: 33281 ctaataaattttggaatattt 33301
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>gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complete sequence
          Length = 168742

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     taaattttggaatattttatt 98
              |||||||||||||||||||||
Sbjct: 161598 taaattttggaatattttatt 161578
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>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence
          Length = 184203

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     taaattttggaatattttatt 98
              |||||||||||||||||||||
Sbjct: 134563 taaattttggaatattttatt 134583
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>ref|XM_640078.1| Dictyostelium discoideum hypothetical protein (DDB0168684), partial
            mRNA
          Length = 6063

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aattttggaatattttattc 99
            ||||||||||||||||||||
Sbjct: 2480 aattttggaatattttattc 2499
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>ref|XM_415886.1| PREDICTED: Gallus gallus similar to KIAA1287 protein (LOC417641),
           mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ttggaatattttattccatc 103
           ||||||||||||||||||||
Sbjct: 920 ttggaatattttattccatc 901
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>ref|NM_001030722.1| Gallus gallus integrator complex subunit 2 (INTS2), mRNA
          Length = 5076

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ttggaatattttattccatc 103
            ||||||||||||||||||||
Sbjct: 4025 ttggaatattttattccatc 4006
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>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaattttggaatattttatt 98
              ||||||||||||||||||||
Sbjct: 146380 aaattttggaatattttatt 146399
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>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence
          Length = 126187

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     taataaattttggaatattt 94
              ||||||||||||||||||||
Sbjct: 108696 taataaattttggaatattt 108715
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>emb|AJ719990.1| Gallus gallus mRNA for hypothetical protein, clone 9c3
          Length = 5076

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ttggaatattttattccatc 103
            ||||||||||||||||||||
Sbjct: 4025 ttggaatattttattccatc 4006
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>emb|CR392347.5| Zebrafish DNA sequence from clone DKEY-37G12 in linkage group 1,
             complete sequence
          Length = 172461

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 75    taataaattttggaatattttattccat 102
             |||||| ||||||||||||||| |||||
Sbjct: 41326 taataatttttggaatattttaatccat 41299
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>emb|CR522900.1| Gallus gallus finished cDNA, clone ChEST396a11
          Length = 999

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ttggaatattttattccatc 103
           ||||||||||||||||||||
Sbjct: 406 ttggaatattttattccatc 387
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>gb|AC114265.2| Dictyostelium discoideum chromosome 2 map 4520461-4544940 strain AX4,
            complete sequence
          Length = 24479

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aattttggaatattttattc 99
            ||||||||||||||||||||
Sbjct: 2809 aattttggaatattttattc 2828
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>emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in linkage group 20,
              complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     taagtaaacaatttactagt 63
              ||||||||||||||||||||
Sbjct: 117350 taagtaaacaatttactagt 117331
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>emb|AL954136.13| Zebrafish DNA sequence from clone CH211-220E11, complete sequence
          Length = 194869

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     taataaattttggaatattttatt 98
              |||||||||||| |||||||||||
Sbjct: 163763 taataaattttgtaatattttatt 163786
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>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete sequence
          Length = 212009

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaattttggaatattttatt 98
              ||||||||||||||||||||
Sbjct: 136964 aaattttggaatattttatt 136983
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>emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chromosome 3, complete
             sequence
          Length = 199673

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aaattttggaatattttatt 98
             ||||||||||||||||||||
Sbjct: 35654 aaattttggaatattttatt 35635
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>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence
          Length = 166185

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 129    tgtttcttgcctgtttgcc 147
              |||||||||||||||||||
Sbjct: 136539 tgtttcttgcctgtttgcc 136521
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>gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome 6, complete sequence
          Length = 243690

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     aaattttggaatattttat 97
              |||||||||||||||||||
Sbjct: 130451 aaattttggaatattttat 130433
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>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the
             complete genome
          Length = 291847

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 114   tgctggaacaattattgtt 132
             |||||||||||||||||||
Sbjct: 83578 tgctggaacaattattgtt 83596
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>gb|U61944.1| Caenorhabditis elegans cosmid T12E12, complete sequence
          Length = 35296

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 33956 aataaattttggaaaattttatt 33978
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>gb|AC150593.2| Bos taurus  BAC CH240-105D16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 151783

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    attttggaatattttattc 99
             |||||||||||||||||||
Sbjct: 32473 attttggaatattttattc 32491
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>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence
          Length = 151577

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     ttggaatattttattccat 102
              |||||||||||||||||||
Sbjct: 131014 ttggaatattttattccat 130996
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 114     tgctggaacaattattgtt 132
               |||||||||||||||||||
Sbjct: 1269711 tgctggaacaattattgtt 1269693
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>gb|AC006830.2| Caenorhabditis elegans cosmid ZK105, complete sequence
          Length = 32451

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 76  aataaattttggaatattttatt 98
           |||||||||||||| ||||||||
Sbjct: 775 aataaattttggaaaattttatt 797



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 76  aataaattttggaatattttatt 98
           |||||||||||||| ||||||||
Sbjct: 173 aataaattttggaaaattttatt 151
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>gb|AC006835.1| Caenorhabditis elegans cosmid ZK993, complete sequence
          Length = 32557

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 20581 aataaattttggaaaattttatt 20603



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 18177 aataaattttggaaaattttatt 18155
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>emb|AL132859.1|CEY39C12A Caenorhabditis elegans YAC Y39C12A, complete sequence
          Length = 35922

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 27139 aataaattttggaaaattttatt 27161
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>emb|AL032651.1|CEY6D1A Caenorhabditis elegans YAC Y6D1A, complete sequence
          Length = 13328

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 76   aataaattttggaatattttatt 98
            |||||||||||||| ||||||||
Sbjct: 9948 aataaattttggaaaattttatt 9970
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>emb|Z98866.1|CEY49E10 Caenorhabditis elegans YAC Y49E10, complete sequence
          Length = 125590

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 22194 aataaattttggaaaattttatt 22216
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>emb|AL023828.1|CEY17G7B Caenorhabditis elegans YAC Y17G7B, complete sequence
          Length = 143092

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 76     aataaattttggaatattttatt 98
              |||||||||||||| ||||||||
Sbjct: 122514 aataaattttggaaaattttatt 122492
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>ref|XM_725495.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00263)
           partial mRNA
          Length = 444

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ataaattttggaatatttt 95
           |||||||||||||||||||
Sbjct: 234 ataaattttggaatatttt 216
to top
>ref|XM_737825.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000469.03.0)
           partial mRNA
          Length = 1110

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 76  aataaattttggaatattttatt 98
           ||||||||||||||| |||||||
Sbjct: 172 aataaattttggaattttttatt 194
to top
>gb|U55365.1| Caenorhabditis elegans cosmid C12D5, complete sequence
          Length = 28816

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 28789 aataaattttggaaaattttatt 28767
to top
>emb|AL603902.4| Human DNA sequence from clone RP11-167I10 on chromosome 6 Contains the
             3' end of the TRDN gene for triadin (TDN, TRIADIN),
             complete sequence
          Length = 158024

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    tggaatattttattccatc 103
             |||||||||||||||||||
Sbjct: 45670 tggaatattttattccatc 45652
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>emb|AL450083.11| Human DNA sequence from clone RP11-514P7 on chromosome X, complete
            sequence
          Length = 169494

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 77   ataaattttggaatatttt 95
            |||||||||||||||||||
Sbjct: 8880 ataaattttggaatatttt 8898
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>emb|AL354977.10| Human DNA sequence from clone RP11-509J21 on chromosome 9 Contains the
             3' end of a novel gene and three novel genes, complete
             sequence
          Length = 163447

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    taaattttggaatatttta 96
             |||||||||||||||||||
Sbjct: 59770 taaattttggaatatttta 59788
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 114     tgctggaacaattattgtt 132
               |||||||||||||||||||
Sbjct: 1263553 tgctggaacaattattgtt 1263535
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>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20
          Length = 258050

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    tgctggaacaattattgtt 132
              |||||||||||||||||||
Sbjct: 218447 tgctggaacaattattgtt 218465
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>gb|AF494279.1| Chaetosphaeridium globosum mitochondrial DNA, complete  genome
          Length = 56574

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    ttttggaatattttattcc 100
             |||||||||||||||||||
Sbjct: 52300 ttttggaatattttattcc 52282
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>gb|AC108221.4| Homo sapiens BAC clone RP11-783P19 from 4, complete sequence
          Length = 59605

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   aataaattttggaatattt 94
            |||||||||||||||||||
Sbjct: 3195 aataaattttggaatattt 3213
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>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete
            sequence
          Length = 91863

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 81   attttggaatattttattc 99
            |||||||||||||||||||
Sbjct: 5328 attttggaatattttattc 5346
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>gb|AC100767.2| Homo sapiens chromosome 11, clone RP11-787P24, complete sequence
          Length = 170435

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 77     ataaattttggaatattttattc 99
              ||||| |||||||||||||||||
Sbjct: 129233 ataaaatttggaatattttattc 129211
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>gb|AC003046.4| Homo sapiens Xp22 PACs RPC11-263P4 and RPC11-164K3 complete sequence
          Length = 166757

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    tagtttgcattgccctaat 78
             |||||||||||||||||||
Sbjct: 33239 tagtttgcattgccctaat 33221
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>ref|XM_625419.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_3980),
            partial mRNA
          Length = 2655

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 79   aaattttggaatattttattcca 101
            |||||||| ||||||||||||||
Sbjct: 2242 aaattttgtaatattttattcca 2264
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>gb|AC021850.8|AC021850 Homo sapiens BAC clone RP11-389E17 from 4, complete sequence
          Length = 206966

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     aattttggaatattttatt 98
              |||||||||||||||||||
Sbjct: 194325 aattttggaatattttatt 194307
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 72      ccctaataaattttggaat 90
               |||||||||||||||||||
Sbjct: 3546360 ccctaataaattttggaat 3546342
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>gb|AC009054.8| Homo sapiens chromosome 16 clone RP11-252K23, complete sequence
          Length = 157113

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 84    ttggaatattttattccat 102
             |||||||||||||||||||
Sbjct: 98995 ttggaatattttattccat 98977
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>gb|AC093773.3| Homo sapiens BAC clone RP11-127A9 from 4, complete sequence
          Length = 167011

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     ataaattttggaatatttt 95
              |||||||||||||||||||
Sbjct: 141338 ataaattttggaatatttt 141320
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>gb|AC068999.15|AC068999 Homo sapiens chromosome 18 clone RP11-70G19, complete sequence
          Length = 194813

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 75     taataaattttggaatattttat 97
              |||||||||||||| ||||||||
Sbjct: 167819 taataaattttggattattttat 167841
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>gb|AC009804.2| Homo sapiens 12 BAC RP11-411G2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 140151

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    taaattttggaatatttta 96
             |||||||||||||||||||
Sbjct: 70792 taaattttggaatatttta 70810
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>gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 140971

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aaattttggaatattttat 97
             |||||||||||||||||||
Sbjct: 77775 aaattttggaatattttat 77757
to top
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147895

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    tagtttgcattgccctaat 78
             |||||||||||||||||||
Sbjct: 30243 tagtttgcattgccctaat 30261
to top
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
             complete sequence
          Length = 333321

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             ||||||| |||||||||||||||
Sbjct: 40301 aataaatattggaatattttatt 40323
to top
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     taaattttggaatatttta 96
              |||||||||||||||||||
Sbjct: 107524 taaattttggaatatttta 107506
to top
>gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence
          Length = 180643

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     aataaattttggaatattt 94
              |||||||||||||||||||
Sbjct: 154915 aataaattttggaatattt 154933
to top
>gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112405

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 125   ttattgtttcttgcctgtttgcc 147
             |||||||||||||||| ||||||
Sbjct: 68313 ttattgtttcttgcctctttgcc 68291
to top
>gb|AF538044.1| Amoebidium parasiticum mitochondrial chromosome 0283riay48_mtg,
            partial sequence
          Length = 6902

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                           
Query: 64   ttgcattgccctaataa-attttggaatatt 93
            |||||| |||||||||| |||||||||||||
Sbjct: 5262 ttgcatcgccctaataatattttggaatatt 5232
to top
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 113    ttgctggaacaattattgtttct 135
              ||||||||||| |||||||||||
Sbjct: 151149 ttgctggaacatttattgtttct 151171
to top
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1641_C04
          Length = 134367

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ccctaataaattttggaat 90
             |||||||||||||||||||
Sbjct: 15677 ccctaataaattttggaat 15659
to top
>gb|AC153521.7| Mus musculus 10 BAC RP23-292G15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 202995

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    taaattttggaatatttta 96
             |||||||||||||||||||
Sbjct: 47802 taaattttggaatatttta 47784
to top
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ccctaataaattttggaat 90
             |||||||||||||||||||
Sbjct: 84310 ccctaataaattttggaat 84292
to top
>emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on chromosome X, complete
            sequence
          Length = 159014

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   aattttggaatattttatt 98
            |||||||||||||||||||
Sbjct: 9935 aattttggaatattttatt 9917
to top
>gb|AC006608.2| Caenorhabditis elegans cosmid C15F1, complete sequence
          Length = 37656

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 29589 aataaattttggaaaattttatt 29611



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 26555 aataaattttggaaaattttatt 26533
to top
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence
          Length = 313573

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 76     aataaattttggaatattttatt 98
              |||||||||||||| ||||||||
Sbjct: 138781 aataaattttggaaaattttatt 138803
to top
>emb|Z81589.1|CET08G5 Caenorhabditis elegans Cosmid T08G5, complete sequence
          Length = 32377

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 30705 aataaattttggaaaattttatt 30683
to top
>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence
          Length = 170303

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 84     ttggaatattttattccat 102
              |||||||||||||||||||
Sbjct: 167533 ttggaatattttattccat 167551
to top
>gb|AC107045.9| Mus musculus chromosome 1, clone RP23-334J7, complete sequence
          Length = 222700

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 78     taaattttggaatatttta 96
              |||||||||||||||||||
Sbjct: 209241 taaattttggaatatttta 209259
to top
>dbj|AP005208.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-138C24, complete
             sequence
          Length = 171454

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 75    taataaattttggaatattttat 97
             |||||||||||||| ||||||||
Sbjct: 10664 taataaattttggattattttat 10686
to top
>gb|DQ132803.1| Oryzias latipes LRH-1 mRNA, complete cds
          Length = 2634

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 130  gtttcttgcctgtttgcct 148
            |||||||||||||||||||
Sbjct: 2629 gtttcttgcctgtttgcct 2611
to top
>emb|Z92781.1|CEF09C3 Caenorhabditis elegans Cosmid F09C3, complete sequence
          Length = 35422

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 32363 aataaattttggaaaattttatt 32341
to top
>emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, complete sequence
          Length = 227606

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 76     aataaattttggaatattttatt 98
              |||||||||||||| ||||||||
Sbjct: 165773 aataaattttggaaaattttatt 165751



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 99278 aataaattttggaaaattttatt 99300
to top
>emb|Z81519.1|CEF29C12 Caenorhabditis elegans Cosmid F29C12, complete sequence
          Length = 30225

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    aataaattttggaatattttatt 98
             |||||||||||||| ||||||||
Sbjct: 25141 aataaattttggaaaattttatt 25119
to top
>dbj|AP004529.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01K12, TM0058a,
             complete sequence
          Length = 78249

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    cattgccctaataaatttt 85
             |||||||||||||||||||
Sbjct: 40150 cattgccctaataaatttt 40132
to top
>gb|AC161927.11| Mus musculus chromosome 1, clone RP23-22I18, complete sequence
          Length = 223377

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    taaattttggaatatttta 96
             |||||||||||||||||||
Sbjct: 12462 taaattttggaatatttta 12480


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,819,524
Number of Sequences: 3902068
Number of extensions: 1819524
Number of successful extensions: 132498
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 132204
Number of HSP's gapped (non-prelim): 295
length of query: 151
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 130
effective length of database: 17,151,101,840
effective search space: 2229643239200
effective search space used: 2229643239200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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