Clone Name | rbastl16a08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence Length = 221632 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cttcaaatagcaccacaagct 46 ||||||||||||||||||||| Sbjct: 17402 cttcaaatagcaccacaagct 17382
>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence Length = 198984 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cttcaaatagcaccacaagct 46 ||||||||||||||||||||| Sbjct: 32373 cttcaaatagcaccacaagct 32393
>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence Length = 194165 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cttcaaatagcaccacaagct 46 ||||||||||||||||||||| Sbjct: 154159 cttcaaatagcaccacaagct 154139
>gb|AF106564.3| Homo sapiens chromosome 8 clone GS1-72M22 map p21.2, complete sequence Length = 143212 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 agcccaatgattcttaattt 323 |||||||||||||||||||| Sbjct: 36381 agcccaatgattcttaattt 36362
>ref|XM_672554.1| Plasmodium berghei strain ANKA hypothetical protein (PB000206.00.0) partial mRNA Length = 3189 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tgatcatgcaaattcttcaa 31 |||||||||||||||||||| Sbjct: 2760 tgatcatgcaaattcttcaa 2779
>gb|AC109142.7| Mus musculus chromosome 8, clone RP23-168D5, complete sequence Length = 207544 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ccaatgattcttaatttacc 326 |||||||||||||||||||| Sbjct: 28562 ccaatgattcttaatttacc 28581
>gb|AC021000.9| Homo sapiens chromosome 8, clone RP11-381I2, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 agcccaatgattcttaattt 323 |||||||||||||||||||| Sbjct: 90287 agcccaatgattcttaattt 90268
>gb|AC003077.1|AC003077 Human BAC clone GS1-34D21 from 7q31, complete sequence Length = 98387 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gtgatcatgcaaattcttcaaata 34 |||||||| ||||||||||||||| Sbjct: 1194 gtgatcattcaaattcttcaaata 1217
>emb|BX640457.5| Zebrafish DNA sequence from clone DKEY-17A19 in linkage group 19, complete sequence Length = 36582 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ttctctaaccacggcgaccc 292 |||||||||||||||||||| Sbjct: 16005 ttctctaaccacggcgaccc 16024
>gb|AC145946.3| Gallus gallus BAC clone CH261-23O21 from chromosome unknown, complete sequence Length = 248690 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 attcttaatttaccaaatca 332 |||||||||||||||||||| Sbjct: 41654 attcttaatttaccaaatca 41673 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,890,537 Number of Sequences: 3902068 Number of extensions: 2890537 Number of successful extensions: 49816 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49803 Number of HSP's gapped (non-prelim): 13 length of query: 366 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 344 effective length of database: 17,147,199,772 effective search space: 5898636721568 effective search space used: 5898636721568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)