ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF411229.2| Hordeum vulgare gigantea-like protein mRNA, parti... 670 0.0
2gb|AY740524.1| Hordeum vulgare subsp. vulgare gigantea-like prot... 547 e-153
3gb|AF543844.1| Triticum aestivum gigantea (TaGI1) mRNA, complete... 285 5e-74
4gb|AY679115.1| Triticum aestivum gigantea 3 (TaGI3) mRNA, comple... 115 1e-22
5gb|AY679114.1| Triticum aestivum gigantea 2 (TaGI2) mRNA, comple... 115 1e-22
6gb|AY740523.1| Hordeum vulgare gigantea-like protein (GI) mRNA, ... 92 1e-15
7ref|XM_550413.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
9dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
10dbj|AK072166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
11dbj|AK067038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
12gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.30
13gb|AC172863.1| Brassica rapa subsp. pekinensis clone KBrB070M24,... 42 1.2
14gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, com... 40 4.7
15ref|NM_017183.1| Rattus norvegicus interleukin 8 receptor, beta ... 40 4.7
16gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock prote... 40 4.7
17gb|AC113473.20| Mus musculus chromosome 1, clone RP23-280F6, com... 40 4.7
18ref|NM_009909.3| Mus musculus interleukin 8 receptor, beta (Il8r... 40 4.7
19gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome... 40 4.7
20gb|BC051677.1| Mus musculus interleukin 8 receptor, beta, mRNA (... 40 4.7
21gb|AF030691.1| Plasmodium falciparum strain 7G8 CG9 (cg9) and CG... 40 4.7
22gb|AF030690.1| Plasmodium falciparum strain HB3 CG9 (cg9) and CG... 40 4.7
23gb|L26549.1|MUSIL8R Mus musculus interleukin 8 receptor gene, co... 40 4.7
24emb|X77797.1|RNIL8R R.norvegicus mRNA for interleukin-8 receptor 40 4.7
25dbj|AK158234.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 4.7
26gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 1... 40 4.7
27gb|AF260819.1|AF260819 Plasmodium falciparum CG1 protein gene, c... 40 4.7
28gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Can... 40 4.7
29gb|AC153966.4| Mus musculus 10 BAC RP24-357P6 (Roswell Park Canc... 40 4.7
30gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 40 4.7
31dbj|D17630.1|MUSITLK8 Mus musculus IL-8R mRNA for interleukin-8 ... 40 4.7
32gb|U70988.1|RNU70988 Rattus norvegicus CXC chemokine receptor (C... 40 4.7
33gb|U31207.1|MMU31207 Mus musculus interleukin-8 receptor gene, c... 40 4.7
34gb|L13239.1|MUSIL8GROA Mouse IL8/gro-alpha receptor gene, comple... 40 4.7
35gb|L23637.1|MUSIL8RB Mouse interleukin-8 receptor type B (Il8rb)... 40 4.7
36dbj|D63584.1|RATGMGSAR Rat gene for gro/MGSA receptor, complete cds 40 4.7 
>gb|AF411229.2| Hordeum vulgare gigantea-like protein mRNA, partial cds
          Length = 2900

 Score =  670 bits (338), Expect = 0.0
 Identities = 338/338 (100%)
 Strand = Plus / Minus

                                                                        
Query: 20   tgacacgtcttcatttaacatagcggacatcttactgttacatcatgaatacaagttaca 79
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2875 tgacacgtcttcatttaacatagcggacatcttactgttacatcatgaatacaagttaca 2816

                                                                        
Query: 80   gcacaagcagttcaatatgcttgaacatctaacgtcagattgcaagttaaaatcacaccg 139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2815 gcacaagcagttcaatatgcttgaacatctaacgtcagattgcaagttaaaatcacaccg 2756

                                                                        
Query: 140  cgggagcaaagctccgtatgattgggaacatcagctaatatacatcacatcatggggggc 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2755 cgggagcaaagctccgtatgattgggaacatcagctaatatacatcacatcatggggggc 2696

                                                                        
Query: 200  agactgggaatggaaagccatccttgagcaagggattaattagccatcctgctcgctgac 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2695 agactgggaatggaaagccatccttgagcaagggattaattagccatcctgctcgctgac 2636

                                                                        
Query: 260  catgcagcaactgctcgcaccaactgtcaagtgttgctgattgtcagcttcaaatatggc 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2635 catgcagcaactgctcgcaccaactgtcaagtgttgctgattgtcagcttcaaatatggc 2576

                                                  
Query: 320  cttgtcagcaaggaagggggcagccgagctcgttagca 357
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 2575 cttgtcagcaaggaagggggcagccgagctcgttagca 2538
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>gb|AY740524.1| Hordeum vulgare subsp. vulgare gigantea-like protein (GI) gene,
            complete cds
          Length = 7682

 Score =  547 bits (276), Expect = e-153
 Identities = 279/280 (99%)
 Strand = Plus / Minus

                                                                        
Query: 78   cagcacaagcagttcaatatgcttgaacatctaacgtcagattgcaagttaaaatcacac 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7681 cagcacaagcagttcaatatgcttgaacatctaacgtcagattgcaagttaaaatcacac 7622

                                                                        
Query: 138  cgcgggagcaaagctccgtatgattgggaacatcagctaatatacatcacatcatggggg 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7621 cgcgggagcaaagctccgtatgattgggaacatcagctaatatacatcacatcatggggg 7562

                                                                        
Query: 198  gcagactgggaatggaaagccatccttgagcaagggattaattagccatcctgctcgctg 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7561 gcagactgggaatggaaagccatccttgagcaagggattaattagccatcctgctcgctg 7502

                                                                        
Query: 258  accatgcagcaactgctcgcaccaactgtcaagtgttgctgattgtcagcttcaaatatg 317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7501 accatgcagcaactgctcgcaccaactgtcaagtgttgctgattgtcagcttcaaatatg 7442

                                                    
Query: 318  gccttgtcagcaaggaagggggcagccgagctcgttagca 357
            ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7441 gccttgtcagcaaggaagggggcagcccagctcgttagca 7402
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>gb|AF543844.1| Triticum aestivum gigantea (TaGI1) mRNA, complete cds
          Length = 4012

 Score =  285 bits (144), Expect = 5e-74
 Identities = 166/172 (96%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                        
Query: 16   aaaatgacacgtcttcatttaacatagcggacatcttactgttacatcatgaatacaagt 75
            ||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 3983 aaaatgacatgtcttcatttaccatagcggacatctttcggttacatcatgaatacaagt 3924

                                                                        
Query: 76   tacagcacaagcagtt-caatatgcttgaacatctaacgtcagattgcaagttaaaatca 134
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 tacagcacaagcagtttcaatatgcttgaacatctaacgtcagattgcaagttaaaatca 3864

                                                                
Query: 135  caccgcgggagcaaagctccgtatgattgggaacatcagctaatatacatca 186
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 caccgggggagcaaagctccgtatgattgggaacatcagctaatatacatca 3812



 Score =  260 bits (131), Expect = 3e-66
 Identities = 140/143 (97%)
 Strand = Plus / Minus

                                                                        
Query: 214  aagccatccttgagcaagggattaattagccatcctgctcgctgaccatgcagcaactgc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3775 aagccatccttgagcaagggattaattagccatcctgctcgctgaccatgcagcaactgc 3716

                                                                        
Query: 274  tcgcaccaactgtcaagtgttgctgattgtcagcttcaaatatggccttgtcagcaagga 333
            |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 3715 tcgcgccaactgtcaagtgtcgctgattgtcagctccaaatatggccttgtcagcaagga 3656

                                   
Query: 334  agggggcagccgagctcgttagc 356
            |||||||||||||||||||||||
Sbjct: 3655 agggggcagccgagctcgttagc 3633
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>gb|AY679115.1| Triticum aestivum gigantea 3 (TaGI3) mRNA, complete cds
          Length = 3548

 Score =  115 bits (58), Expect = 1e-22
 Identities = 61/62 (98%)
 Strand = Plus / Minus

                                                                        
Query: 295  gctgattgtcagcttcaaatatggccttgtcagcaaggaagggggcagccgagctcgtta 354
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3536 gctgattgtcagctccaaatatggccttgtcagcaaggaagggggcagccgagctcgtta 3477

              
Query: 355  gc 356
            ||
Sbjct: 3476 gc 3475
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>gb|AY679114.1| Triticum aestivum gigantea 2 (TaGI2) mRNA, complete cds
          Length = 3543

 Score =  115 bits (58), Expect = 1e-22
 Identities = 61/62 (98%)
 Strand = Plus / Minus

                                                                        
Query: 295  gctgattgtcagcttcaaatatggccttgtcagcaaggaagggggcagccgagctcgtta 354
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 gctgattgtcagctccaaatatggccttgtcagcaaggaagggggcagccgagctcgtta 3471

              
Query: 355  gc 356
            ||
Sbjct: 3470 gc 3469
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>gb|AY740523.1| Hordeum vulgare gigantea-like protein (GI) mRNA, complete cds
          Length = 3480

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 312  aatatggccttgtcagcaaggaagggggcagccgagctcgttagca 357
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3480 aatatggccttgtcagcaaggaagggggcagccgagctcgttagca 3435
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>ref|XM_550413.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4184

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 68   atacaagttacagcacaagcag-ttcaatatgcttgaacatctaacgtcag 117
            |||||||||||||||||||||| ||  |||||||||||||||||| |||||
Sbjct: 4155 atacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcag 4105



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 316  tggccttgtcagcaaggaagggggcagccgagctc 350
            ||||||||||||||||  || ||||||||||||||
Sbjct: 3928 tggccttgtcagcaagtgagtgggcagccgagctc 3894



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  ttgggaacatcagctaatat 180
            ||||||||||||||||||||
Sbjct: 4041 ttgggaacatcagctaatat 4022
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                  
Query: 68      atacaagttacagcacaagcag-ttcaatatgcttgaacatctaacgtcag 117
               |||||||||||||||||||||| ||  |||||||||||||||||| |||||
Sbjct: 4328490 atacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcag 4328540



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 316     tggccttgtcagcaaggaagggggcagccgagctc 350
               ||||||||||||||||  || ||||||||||||||
Sbjct: 4328717 tggccttgtcagcaagtgagtgggcagccgagctc 4328751



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     ttgggaacatcagctaatat 180
               ||||||||||||||||||||
Sbjct: 4328604 ttgggaacatcagctaatat 4328623
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>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0666G04
          Length = 141983

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                 
Query: 68     atacaagttacagcacaagcag-ttcaatatgcttgaacatctaacgtcag 117
              |||||||||||||||||||||| ||  |||||||||||||||||| |||||
Sbjct: 108260 atacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcag 108310



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 316    tggccttgtcagcaaggaagggggcagccgagctc 350
              ||||||||||||||||  || ||||||||||||||
Sbjct: 108487 tggccttgtcagcaagtgagtgggcagccgagctc 108521



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ttgggaacatcagctaatat 180
              ||||||||||||||||||||
Sbjct: 108374 ttgggaacatcagctaatat 108393
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>dbj|AK072166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K20, full
            insert sequence
          Length = 4252

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 68   atacaagttacagcacaagcag-ttcaatatgcttgaacatctaacgtcag 117
            |||||||||||||||||||||| ||  |||||||||||||||||| |||||
Sbjct: 4124 atacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcag 4074



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 316  tggccttgtcagcaaggaagggggcagccgagctc 350
            ||||||||||||||||  || ||||||||||||||
Sbjct: 3897 tggccttgtcagcaagtgagtgggcagccgagctc 3863



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  ttgggaacatcagctaatat 180
            ||||||||||||||||||||
Sbjct: 4010 ttgggaacatcagctaatat 3991
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>dbj|AK067038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I22, full
            insert sequence
          Length = 4185

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                               
Query: 68   atacaagttacagcacaagcag-ttcaatatgcttgaacatctaacgtcag 117
            |||||||||||||||||||||| ||  |||||||||||||||||| |||||
Sbjct: 4155 atacaagttacagcacaagcagttttcatatgcttgaacatctaatgtcag 4105



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 316  tggccttgtcagcaaggaagggggcagccgagctc 350
            ||||||||||||||||  || ||||||||||||||
Sbjct: 3928 tggccttgtcagcaagtgagtgggcagccgagctc 3894



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  ttgggaacatcagctaatat 180
            ||||||||||||||||||||
Sbjct: 4041 ttgggaacatcagctaatat 4022
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 255     ctgaccatgcagcaactgctcg 276
               ||||||||||||||||||||||
Sbjct: 2364775 ctgaccatgcagcaactgctcg 2364754
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>gb|AC172863.1| Brassica rapa subsp. pekinensis clone KBrB070M24, complete sequence
          Length = 97697

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    acaagttacagcacaagcagttcaa 94
             |||||| ||||||||||||||||||
Sbjct: 38227 acaagtcacagcacaagcagttcaa 38251
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>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence
          Length = 183087

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    tatggccttgtcagcaagga 333
              ||||||||||||||||||||
Sbjct: 165426 tatggccttgtcagcaagga 165445
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>ref|NM_017183.1| Rattus norvegicus interleukin 8 receptor, beta (Il8rb), mRNA
          Length = 1324

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1122 tatggccttgtcagcaagga 1141
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>gb|AF030694.2| Plasmodium falciparum strain Dd2 heat shock protein 86 (HSP86), O1
             (o1), O3 (o3), O2 (o2), CG8 (cg8), CG4 (cg4), CG3 (cg3),
             putative chloroquine resistance transporter (crt), CG9
             (cg9), CG1 (cg1), CG6 (cg6), CG2 (cg2), and CG7 (cg7)
             genes, complete cds
          Length = 47573

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   tgggaacatcagctaatata 181
             ||||||||||||||||||||
Sbjct: 30343 tgggaacatcagctaatata 30362
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>gb|AC113473.20| Mus musculus chromosome 1, clone RP23-280F6, complete sequence
          Length = 221025

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   tatggccttgtcagcaagga 333
             ||||||||||||||||||||
Sbjct: 68557 tatggccttgtcagcaagga 68576
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>ref|NM_009909.3| Mus musculus interleukin 8 receptor, beta (Il8rb), mRNA
          Length = 3043

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1136 tatggccttgtcagcaagga 1155
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>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence
          Length = 162162

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tgaatacaagttacagcaca 84
             ||||||||||||||||||||
Sbjct: 22393 tgaatacaagttacagcaca 22412
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>gb|BC051677.1| Mus musculus interleukin 8 receptor, beta, mRNA (cDNA clone MGC:60615
            IMAGE:30023687), complete cds
          Length = 2842

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1109 tatggccttgtcagcaagga 1128
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>gb|AF030691.1| Plasmodium falciparum strain 7G8 CG9 (cg9) and CG1 (cg1) genes,
            complete cds
          Length = 4005

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  tgggaacatcagctaatata 181
            ||||||||||||||||||||
Sbjct: 2118 tgggaacatcagctaatata 2137
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>gb|AF030690.1| Plasmodium falciparum strain HB3 CG9 (cg9) and CG1 (cg1) genes,
            complete cds
          Length = 4005

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  tgggaacatcagctaatata 181
            ||||||||||||||||||||
Sbjct: 2140 tgggaacatcagctaatata 2159
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>gb|L26549.1|MUSIL8R Mus musculus interleukin 8 receptor gene, complete cds
          Length = 2333

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 2089 tatggccttgtcagcaagga 2108
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>emb|X77797.1|RNIL8R R.norvegicus mRNA for interleukin-8 receptor
          Length = 1324

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1122 tatggccttgtcagcaagga 1141
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>dbj|AK158234.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930044K23 product:interleukin 8 receptor,
            beta, full insert sequence
          Length = 2220

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1142 tatggccttgtcagcaagga 1161
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>gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 13, complete sequence
          Length = 215256

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 218    catccttgagcaagggattaattagccatcct 249
              ||||||| || |||||||| ||||||||||||
Sbjct: 139265 catccttaagtaagggattcattagccatcct 139296
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>gb|AF260819.1|AF260819 Plasmodium falciparum CG1 protein gene, complete cds
          Length = 2820

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  tgggaacatcagctaatata 181
            ||||||||||||||||||||
Sbjct: 1001 tgggaacatcagctaatata 1020
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>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 170093

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    aactgtcaagtgttgctgat 300
              ||||||||||||||||||||
Sbjct: 141816 aactgtcaagtgttgctgat 141835
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>gb|AC153966.4| Mus musculus 10 BAC RP24-357P6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 155839

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   aactgtcaagtgttgctgat 300
             ||||||||||||||||||||
Sbjct: 67697 aactgtcaagtgttgctgat 67716
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>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
             sequence
          Length = 585533

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    agcacaagcagttcaatatg 98
             ||||||||||||||||||||
Sbjct: 12103 agcacaagcagttcaatatg 12084
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>dbj|D17630.1|MUSITLK8 Mus musculus IL-8R mRNA for interleukin-8 receptor, complete cds
          Length = 1858

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1132 tatggccttgtcagcaagga 1151
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>gb|U70988.1|RNU70988 Rattus norvegicus CXC chemokine receptor (CXCR2) gene, complete cds
          Length = 1269

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1152 tatggccttgtcagcaagga 1171
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>gb|U31207.1|MMU31207 Mus musculus interleukin-8 receptor gene, complete cds
          Length = 1961

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1107 tatggccttgtcagcaagga 1126
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>gb|L13239.1|MUSIL8GROA Mouse IL8/gro-alpha receptor gene, complete cds
          Length = 1080

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 991  tatggccttgtcagcaagga 1010
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>gb|L23637.1|MUSIL8RB Mouse interleukin-8 receptor type B (Il8rb) gene, complete cds
          Length = 3450

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 2086 tatggccttgtcagcaagga 2105
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>dbj|D63584.1|RATGMGSAR Rat gene for gro/MGSA receptor, complete cds
          Length = 1460

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  tatggccttgtcagcaagga 333
            ||||||||||||||||||||
Sbjct: 1311 tatggccttgtcagcaagga 1330


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,830,863
Number of Sequences: 3902068
Number of extensions: 2830863
Number of successful extensions: 48532
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48444
Number of HSP's gapped (non-prelim): 82
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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