ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl16a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
2dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
3dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
4dbj|AK066685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
5dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine d... 54 3e-04
6gb|AY107504.1| Zea mays PCO076481 mRNA sequence 50 0.004
7gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 46 0.065
8gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, com... 44 0.26
9gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, com... 44 0.26
10gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence 44 0.26
11gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-... 44 0.26
12emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chro... 44 0.26
13ref|NG_001334.1| Homo sapiens growth hormone locus (GH@) on chro... 42 1.0
14gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, co... 42 1.0
15dbj|AK155956.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.0
16gb|AC040958.20| Homo sapiens chromosome 17, clone RP11-630H24, c... 42 1.0
17gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, comple... 42 1.0
18gb|AC127029.12| Homo sapiens chromosome 17, clone CTC-264K15, co... 42 1.0
19gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, comple... 42 1.0
20emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chr... 42 1.0
21emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chro... 42 1.0
22gb|J03071.1|HUMGHCSA Human growth hormone (GH-1 and GH-2) and ch... 42 1.0
23gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, co... 40 4.0
24gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, com... 40 4.0
25ref|XM_526750.1| PREDICTED: Pan troglodytes similar to 60S ribos... 40 4.0
26gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, com... 40 4.0
27gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome... 40 4.0
28gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome... 40 4.0
29gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 4.0
30gb|DQ002803.1| Macaca mulatta chorionic somatommamotropin hormon... 40 4.0
31gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, com... 40 4.0
32gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosom... 40 4.0
33gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome... 40 4.0
34gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, compl... 40 4.0
35emb|CT030685.6| Mouse DNA sequence from clone RP24-284M15 on chr... 40 4.0
36ref|XM_390261.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 4.0
37gb|AC130539.3| Mus musculus BAC clone RP23-455J15 from chromosom... 40 4.0
38gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome... 40 4.0
39gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome... 40 4.0
40gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosom... 40 4.0
41gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, comple... 40 4.0
42gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, comp... 40 4.0
43gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complet... 40 4.0
44emb|Z82196.2|HS288L1 Human DNA sequence from clone RP1-288L1 on ... 40 4.0
45emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on ch... 40 4.0
46gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, com... 40 4.0
47gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, compl... 40 4.0
48gb|AC093004.2| Homo sapiens 3 BAC RP11-129J11 (Roswell Park Canc... 40 4.0
49gb|AC091910.3| Homo sapiens chromosome 5 clone RP11-210I16, comp... 40 4.0
50gb|AC108937.4| Homo sapiens BAC clone RP11-679I19 from 4, comple... 40 4.0
51gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, comp... 40 4.0
52gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 4.0
53gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex B... 40 4.0
54gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Canc... 40 4.0
55gb|AC126425.2| Lemur catta, clone -162D1, complete sequence 40 4.0
56gb|AC131599.2| Lemur catta, clone -206F2, complete sequence 40 4.0
57gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, comp... 40 4.0
58gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 4.0
59gb|AC009482.4| Homo sapiens BAC clone RP11-303F17 from 2, comple... 40 4.0
60gb|AC084531.1|CBRG22D22 Caenorhabditis briggsae cosmid G22D22, c... 40 4.0
61gb|AC010873.12| Homo sapiens BAC clone RP11-112N16 from 2, compl... 40 4.0
62gb|AC090945.1| Homo sapiens chromosome 3 clone RP11-255O19 map 3... 40 4.0
63gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, comp... 40 4.0
64gb|AC127302.3| Mus musculus BAC clone RP23-269P7 from chromosome... 40 4.0
65emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 ... 40 4.0
66gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, co... 40 4.0
67gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.70... 40 4.0
68gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complet... 40 4.0
69gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complet... 40 4.0
70emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase... 40 4.0
71gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complet... 40 4.0
72emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromo... 40 4.0
73emb|AL844843.4| Mouse DNA sequence from clone RP23-376P3 on chro... 40 4.0
74emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chr... 40 4.0 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                          
Query: 281     aggtaggacgccagccgcaggatgtcg 307
               |||||||||||||||||||||||||||
Sbjct: 6941170 aggtaggacgccagccgcaggatgtcg 6941196
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 281   aggtaggacgccagccgcaggatgtcg 307
             |||||||||||||||||||||||||||
Sbjct: 12341 aggtaggacgccagccgcaggatgtcg 12367
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>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full
            insert sequence
          Length = 3120

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 281  aggtaggacgccagccgcaggatgtcg 307
            |||||||||||||||||||||||||||
Sbjct: 2817 aggtaggacgccagccgcaggatgtcg 2791
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>dbj|AK066685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M24, full
            insert sequence
          Length = 2328

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 281  aggtaggacgccagccgcaggatgtcg 307
            |||||||||||||||||||||||||||
Sbjct: 2034 aggtaggacgccagccgcaggatgtcg 2008
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>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete cds
          Length = 3061

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 281  aggtaggacgccagccgcaggatgtcg 307
            |||||||||||||||||||||||||||
Sbjct: 2784 aggtaggacgccagccgcaggatgtcg 2758
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>gb|AY107504.1| Zea mays PCO076481 mRNA sequence
          Length = 832

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 275 gcgccgaggtaggacgccagccgcaggatgtcg 307
           ||||| ||||| |||||||||||||||||||||
Sbjct: 579 gcgccaaggtaagacgccagccgcaggatgtcg 547
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>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 130    aaacaaaacaaaacatcttatttgctt 156
              ||||||||||||||| |||||||||||
Sbjct: 106272 aaacaaaacaaaacaccttatttgctt 106298
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>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence
          Length = 168316

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 130   aaacaaaacaaaacatcttatt 151
             ||||||||||||||||||||||
Sbjct: 91146 aaacaaaacaaaacatcttatt 91125
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>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence
          Length = 167209

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 130   aaacaaaacaaaacatcttatt 151
             ||||||||||||||||||||||
Sbjct: 50188 aaacaaaacaaaacatcttatt 50209
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>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 278  ccgaggtaggacgccagccgcaggatgtcg 307
            |||||||| |||||||||||||| ||||||
Sbjct: 2784 ccgaggtaagacgccagccgcagaatgtcg 2755
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>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase
            mRNA, complete cds
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 278  ccgaggtaggacgccagccgcaggatgtcg 307
            |||||||| |||||||||||||| ||||||
Sbjct: 2784 ccgaggtaagacgccagccgcagaatgtcg 2755
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>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete
              sequence
          Length = 232587

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 123    cactggcaaacaaaacaaaaca 144
              ||||||||||||||||||||||
Sbjct: 224766 cactggcaaacaaaacaaaaca 224787
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>ref|NG_001334.1| Homo sapiens growth hormone locus (GH@) on chromosome 17
          Length = 55000

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    ttttttattattgcactgataattc 45
             |||||||||||| ||||||||||||
Sbjct: 32961 ttttttattattacactgataattc 32937



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tttttattattgcactgataattc 45
             ||||||||||| ||||||||||||
Sbjct: 18210 tttttattattacactgataattc 18187
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>gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, complete sequence
          Length = 183977

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 121  cacactggcaaacaaaacaaaacat 145
            ||||||| |||||||||||||||||
Sbjct: 4688 cacactgacaaacaaaacaaaacat 4664
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>dbj|AK155956.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830002B03 product:sialyltransferase 7
            ((alpha-N-acetylneuraminyl
            2,3-betagalactosyl-1,3)-N-acetyl galactosaminide
            alpha-2,6-sialyltransferase) D, full insert sequence
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  caaacaaaacaaaacatctta 149
            |||||||||||||||||||||
Sbjct: 2734 caaacaaaacaaaacatctta 2754
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>gb|AC040958.20| Homo sapiens chromosome 17, clone RP11-630H24, complete sequence
          Length = 26211

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    ttttttattattgcactgataattc 45
             |||||||||||| ||||||||||||
Sbjct: 21758 ttttttattattacactgataattc 21782
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>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence
          Length = 188353

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   aaacaaaacaaaacatcttat 150
             |||||||||||||||||||||
Sbjct: 86112 aaacaaaacaaaacatcttat 86132
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>gb|AC127029.12| Homo sapiens chromosome 17, clone CTC-264K15, complete sequence
          Length = 101990

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 21  ttttttattattgcactgataattc 45
           |||||||||||| ||||||||||||
Sbjct: 145 ttttttattattacactgataattc 169



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tttttattattgcactgataattc 45
             ||||||||||| ||||||||||||
Sbjct: 14914 tttttattattacactgataattc 14937
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>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence
          Length = 197913

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    cacactggcaaacaaaacaaaacat 145
              ||||||| |||||||||||||||||
Sbjct: 132152 cacactgacaaacaaaacaaaacat 132128
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>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete
             sequence
          Length = 204136

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   caaacaaaacaaaacatctta 149
             |||||||||||||||||||||
Sbjct: 11157 caaacaaaacaaaacatctta 11177
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>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete
             sequence
          Length = 218691

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   actggcaaacaaaacaaaaca 144
             |||||||||||||||||||||
Sbjct: 98953 actggcaaacaaaacaaaaca 98933
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>gb|J03071.1|HUMGHCSA Human growth hormone (GH-1 and GH-2) and chorionic somatomammotropin
             (CS-1, CS-2 and CS-5) genes, complete cds
          Length = 66495

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    ttttttattattgcactgataattc 45
             |||||||||||| ||||||||||||
Sbjct: 32962 ttttttattattacactgataattc 32938



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tttttattattgcactgataattc 45
             ||||||||||| ||||||||||||
Sbjct: 18210 tttttattattacactgataattc 18187
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>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence
          Length = 192833

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 43556 ctggcaaacaaaacaaaaca 43537
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>gb|AC102907.11| Mus musculus chromosome 1, clone RP24-291E1, complete sequence
          Length = 185121

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    gaacagcacactggcaaaca 134
              ||||||||||||||||||||
Sbjct: 116300 gaacagcacactggcaaaca 116319
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>ref|XM_526750.1| PREDICTED: Pan troglodytes similar to 60S ribosomal protein L6
           (TAX-responsive enhancer element binding protein 107)
           (TAXREB107) (Neoplasm-related protein C140) (LOC471368),
           mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 ctggcaaacaaaacaaaaca 144
           ||||||||||||||||||||
Sbjct: 487 ctggcaaacaaaacaaaaca 506
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>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence
          Length = 216399

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 73922 aaacaaaacaaaacatctta 73941
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>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence
          Length = 219117

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 170146 ctggcaaacaaaacaaaaca 170165
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>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    aaacaaaacaaaacatctta 149
              ||||||||||||||||||||
Sbjct: 197574 aaacaaaacaaaacatctta 197593
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>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete
              sequence
          Length = 221748

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    aaacaaaacaaaacatcttatttg 153
              ||||||||||||||||||| ||||
Sbjct: 207088 aaacaaaacaaaacatcttctttg 207065
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>gb|DQ002803.1| Macaca mulatta chorionic somatommamotropin hormone 3 (CSH-3) and
            chorionic somatommamotropin hormone 4 (CSH-4) genes,
            complete cds
          Length = 16512

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 22   tttttattattgcactgataattc 45
            ||||||||||| ||||||||||||
Sbjct: 5864 tttttattattacactgataattc 5841
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>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 31001 ctggcaaacaaaacaaaaca 30982
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>gb|AC164304.2| Mus musculus BAC clone RP23-261B24 from chromosome 14, complete sequence
          Length = 184690

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    aaacaaaacaaaacatcttatttg 153
              ||||||||||||||||||| ||||
Sbjct: 181651 aaacaaaacaaaacatcttgtttg 181628
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>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence
          Length = 236510

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 72776 ctggcaaacaaaacaaaaca 72795
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>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence
          Length = 207763

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   caaacaaaacaaaacatctt 148
             ||||||||||||||||||||
Sbjct: 88157 caaacaaaacaaaacatctt 88138
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>emb|CT030685.6| Mouse DNA sequence from clone RP24-284M15 on chromosome 9, complete
              sequence
          Length = 171996

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 147044 ctggcaaacaaaacaaaaca 147063
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>ref|XM_390261.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10085.1)
           partial mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 actggcaaacaaaacaaaac 143
           ||||||||||||||||||||
Sbjct: 669 actggcaaacaaaacaaaac 650
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>gb|AC130539.3| Mus musculus BAC clone RP23-455J15 from chromosome 9, complete sequence
          Length = 179156

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    accccctaccaaggaacagc 121
              ||||||||||||||||||||
Sbjct: 176660 accccctaccaaggaacagc 176641
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>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence
          Length = 182272

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 57411 aaacaaaacaaaacatctta 57430
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>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence
          Length = 186277

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 142549 ctggcaaacaaaacaaaaca 142568
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>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence
          Length = 195987

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    aaacaaaacaaaacatctta 149
              ||||||||||||||||||||
Sbjct: 150035 aaacaaaacaaaacatctta 150054
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>gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, complete sequence
          Length = 190653

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   aaacaaaacaaaacatcttatttg 153
             ||||||||||||||||||| ||||
Sbjct: 44665 aaacaaaacaaaacatcttgtttg 44642
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>gb|AC146786.1| Pan troglodytes BAC clone RP43-34C4 from UL, complete sequence
          Length = 167484

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 29791 aaacaaaacaaaacatctta 29810
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>gb|AC004869.1| Homo sapiens PAC clone RP4-732C22 from 7, complete sequence
          Length = 159044

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 23362 aaacaaaacaaaacatctta 23381
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>emb|Z82196.2|HS288L1 Human DNA sequence from clone RP1-288L1 on chromosome 22, complete
             sequence
          Length = 118593

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   acactggcaaacaaaacaaa 141
             ||||||||||||||||||||
Sbjct: 58985 acactggcaaacaaaacaaa 59004
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>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the
              MTMR6 gene for myotubularin related protein 6, the 5' end
              of a novel gene (KIAA0410) and 2 CpG islands, complete
              sequence
          Length = 122589

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    caaacaaaacaaaacatcttattt 152
              |||||||||||||||| |||||||
Sbjct: 106452 caaacaaaacaaaacaccttattt 106429
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>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 197207 ctggcaaacaaaacaaaaca 197188
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>gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, complete sequence
          Length = 178006

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gaacagcacactggcaaaca 134
             ||||||||||||||||||||
Sbjct: 19903 gaacagcacactggcaaaca 19884
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>gb|AC093004.2| Homo sapiens 3 BAC RP11-129J11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159134

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 49541 aaacaaaacaaaacatctta 49560
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>gb|AC091910.3| Homo sapiens chromosome 5 clone RP11-210I16, complete sequence
          Length = 169490

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    actggcaaacaaaacaaaac 143
              ||||||||||||||||||||
Sbjct: 143197 actggcaaacaaaacaaaac 143216
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>gb|AC108937.4| Homo sapiens BAC clone RP11-679I19 from 4, complete sequence
          Length = 105033

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 62999 aaacaaaacaaaacatctta 62980
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>gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, complete sequence
          Length = 134054

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  actggcaaacaaaacaaaac 143
            ||||||||||||||||||||
Sbjct: 5143 actggcaaacaaaacaaaac 5162
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 200513 ctggcaaacaaaacaaaaca 200494
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>gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326H24, complete
             sequence
          Length = 202513

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tagaagaggcattccctttt 24
             ||||||||||||||||||||
Sbjct: 78842 tagaagaggcattccctttt 78861
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>gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206093

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    aaacaaaacaaaacatctta 149
              ||||||||||||||||||||
Sbjct: 152552 aaacaaaacaaaacatctta 152571
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>gb|AC126425.2| Lemur catta, clone -162D1, complete sequence
          Length = 154718

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 27462 ctggcaaacaaaacaaaaca 27481
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>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence
          Length = 155606

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 90275 ctggcaaacaaaacaaaaca 90256
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>gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, complete sequence
          Length = 178207

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   actggcaaacaaaacaaaac 143
             ||||||||||||||||||||
Sbjct: 42278 actggcaaacaaaacaaaac 42297
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
              BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 110333 ctggcaaacaaaacaaaaca 110314
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>gb|AC009482.4| Homo sapiens BAC clone RP11-303F17 from 2, complete sequence
          Length = 109582

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 70685 ctggcaaacaaaacaaaaca 70704
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>gb|AC084531.1|CBRG22D22 Caenorhabditis briggsae cosmid G22D22, complete sequence
          Length = 38174

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   caaaacaaaacatcttatttgctt 156
             |||||||| |||||||||||||||
Sbjct: 28076 caaaacaacacatcttatttgctt 28099
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>gb|AC010873.12| Homo sapiens BAC clone RP11-112N16 from 2, complete sequence
          Length = 180602

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctggcaaacaaaacaaaaca 144
              ||||||||||||||||||||
Sbjct: 137840 ctggcaaacaaaacaaaaca 137821
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>gb|AC090945.1| Homo sapiens chromosome 3 clone RP11-255O19 map 3p, complete sequence
          Length = 160285

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 48300 ctggcaaacaaaacaaaaca 48319
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>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence
          Length = 164500

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 28679 aaacaaaacaaaacatctta 28698
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>gb|AC127302.3| Mus musculus BAC clone RP23-269P7 from chromosome 9, complete sequence
          Length = 200073

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 21519 ctggcaaacaaaacaaaaca 21538
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>emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 in linkage group 17,
             complete sequence
          Length = 206778

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 46829 aaacaaaacaaaacatctta 46848
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>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence
          Length = 190623

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    aaacaaaacaaaacatctta 149
              ||||||||||||||||||||
Sbjct: 104500 aaacaaaacaaaacatctta 104519
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>gb|AC005920.1|AC005920 Homo sapiens chromosome 17, clone hRPK.700_H_6, complete sequence
          Length = 175793

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    aaacaaaacaaaacatcttatttg 153
              |||||||||||||||| |||||||
Sbjct: 105552 aaacaaaacaaaacatgttatttg 105575
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>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ctggcaaacaaaacaaaaca 144
             ||||||||||||||||||||
Sbjct: 40599 ctggcaaacaaaacaaaaca 40618
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>gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complete sequence
          Length = 195883

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    accccctaccaaggaacagc 121
              ||||||||||||||||||||
Sbjct: 122511 accccctaccaaggaacagc 122530
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>emb|AM039899.1| Hordeum vulgare partial mRNA for chromomethylase 1 (cmt1 gene)
          Length = 2441

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ttgtgcaagaagggtacaag 217
           ||||||||||||||||||||
Sbjct: 944 ttgtgcaagaagggtacaag 963
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>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence
          Length = 173574

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    aaacaaaacaaaacatcttatttg 153
              ||||||||||||||||||| ||||
Sbjct: 110530 aaacaaaacaaaacatcttctttg 110553
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>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence
          Length = 241053

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 113    aggaacagcacactggcaaacaaaacaaaaca 144
              ||||||||| ||||  ||||||||||||||||
Sbjct: 202957 aggaacagctcactcacaaacaaaacaaaaca 202988
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>emb|AL844843.4| Mouse DNA sequence from clone RP23-376P3 on chromosome X, complete
             sequence
          Length = 193470

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aaacaaaacaaaacatctta 149
             ||||||||||||||||||||
Sbjct: 14203 aaacaaaacaaaacatctta 14222
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>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete
             sequence
          Length = 237318

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 113   aggaacagcacactggcaaacaaaacaaaaca 144
             ||||||||| ||||  ||||||||||||||||
Sbjct: 61920 aggaacagctcactcacaaacaaaacaaaaca 61951


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,363,066
Number of Sequences: 3902068
Number of extensions: 4363066
Number of successful extensions: 452195
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 451444
Number of HSP's gapped (non-prelim): 751
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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