Clone Name | rbastl16a01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cacaccgcctgtgcacagacc 257 ||||||||||||||||||||| Sbjct: 1705 cacaccgcctgtgcacagacc 1725
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence Length = 195506 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cacaccgcctgtgcacagacc 257 ||||||||||||||||||||| Sbjct: 189645 cacaccgcctgtgcacagacc 189665
>gb|AC147883.2| Xenopus tropicalis clone CH216-117C13, complete sequence Length = 165987 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 tacatgtacagttttataattacag 188 ||||||||| ||||||||||||||| Sbjct: 43206 tacatgtactgttttataattacag 43230
>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete sequence Length = 187926 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 acagaaatactacaaacattt 85 ||||||||||||||||||||| Sbjct: 46043 acagaaatactacaaacattt 46063
>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence Length = 194372 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 acagaaatactacaaacattt 85 ||||||||||||||||||||| Sbjct: 190292 acagaaatactacaaacattt 190312
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ggagctttctaaaatacaacagcg 140 |||||||||||||||||| ||||| Sbjct: 85374 ggagctttctaaaatacatcagcg 85351
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gaaatactacaaacatttcc 87 |||||||||||||||||||| Sbjct: 40330 gaaatactacaaacatttcc 40349
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaaatactacaaacatttcc 87 |||||||||||||||||||| Sbjct: 103611 gaaatactacaaacatttcc 103592
>gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosome 10, complete sequence Length = 162676 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tctctggaaaccagcaatag 326 |||||||||||||||||||| Sbjct: 923 tctctggaaaccagcaatag 904
>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence Length = 182661 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 tctctggaaaccagcaatag 326 |||||||||||||||||||| Sbjct: 55530 tctctggaaaccagcaatag 55549
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 acgacagaaatactacaaac 81 |||||||||||||||||||| Sbjct: 4896509 acgacagaaatactacaaac 4896528
>emb|CR354603.12| Zebrafish DNA sequence from clone CH211-106J11 in linkage group 24, complete sequence Length = 159582 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tgcaagtcactggcattggt 60 |||||||||||||||||||| Sbjct: 39857 tgcaagtcactggcattggt 39876
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaaatactacaaacatttcc 87 |||||||||||||||||||| Sbjct: 2093 gaaatactacaaacatttcc 2074
>gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, complete sequence Length = 149015 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ttttaagctcattggagatt 164 |||||||||||||||||||| Sbjct: 61370 ttttaagctcattggagatt 61389
>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence Length = 177522 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tagtattaggagctttctaa 128 |||||||||||||||||||| Sbjct: 73742 tagtattaggagctttctaa 73761
>gb|AC022740.4|AC022740 Homo sapiens chromosome 15, clone RP11-617D22, complete sequence Length = 162482 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ttttaagctcattggagatt 164 |||||||||||||||||||| Sbjct: 99619 ttttaagctcattggagatt 99638
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ctcattggagattacatgta 171 |||||||||||||||||||| Sbjct: 26250351 ctcattggagattacatgta 26250332
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone BACR07D17, complete sequence Length = 173422 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 attacatgtacagttttataatta 185 |||||||||| ||||||||||||| Sbjct: 39427 attacatgtatagttttataatta 39450
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ctcattggagattacatgta 171 |||||||||||||||||||| Sbjct: 24979 ctcattggagattacatgta 24960
>emb|BX248136.12| Zebrafish DNA sequence from clone DKEY-81B15 in linkage group 20, complete sequence Length = 222316 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgtacagttttataattaca 187 |||||||||||||||||||| Sbjct: 74167 tgtacagttttataattaca 74148
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ctcattggagattacatgta 171 |||||||||||||||||||| Sbjct: 142209 ctcattggagattacatgta 142190
>emb|CT485672.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 31195 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aaggattagtattaggagct 122 |||||||||||||||||||| Sbjct: 13529 aaggattagtattaggagct 13548
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete sequence Length = 270158 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 attacatgtacagttttataatta 185 |||||||||| ||||||||||||| Sbjct: 29241 attacatgtatagttttataatta 29264
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ggagctttctaaaatacaacagcg 140 |||||||||||||||||| ||||| Sbjct: 57080 ggagctttctaaaatacatcagcg 57057
>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582 (D85)), complete sequence Length = 142799 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 attacatgtacagttttataatta 185 |||||||||| ||||||||||||| Sbjct: 50108 attacatgtatagttttataatta 50085
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 agcattctctggaaaccagc 321 |||||||||||||||||||| Sbjct: 1783 agcattctctggaaaccagc 1802
>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete sequence Length = 218429 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aggagctttctaaaatacaa 135 |||||||||||||||||||| Sbjct: 39369 aggagctttctaaaatacaa 39388
>emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chromosome 2, complete sequence Length = 110275 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 agcattctctggaaaccagc 321 |||||||||||||||||||| Sbjct: 110058 agcattctctggaaaccagc 110077 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,068,460 Number of Sequences: 3902068 Number of extensions: 3068460 Number of successful extensions: 55607 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55519 Number of HSP's gapped (non-prelim): 88 length of query: 351 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 329 effective length of database: 17,147,199,772 effective search space: 5641428724988 effective search space used: 5641428724988 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)