>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 273 LLTGTCII*RSCCVCLCTLLHIYIHVQGRARHFCLGGEGACLCVC 139
           +L+  C+     CVC+C  +++ + V   A  +    E AC+CVC
Sbjct: 368 ILSSVCV-----CVCVCVCMYVCMCVMESACVYVCVMESACVCVC 407

>YR457_MIMIV (Q5UQP5) Hypothetical protein R457|
          Length = 189

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = +2

Query: 116 GINRTNAKQTHKQAPSPPKQKCLALPCTCIYICSRVH---KHTQHDLYIIQVPVKR 274
           G+ R N+K   +QAP    Q  +  P  C       H    H  HD+  + VP  R
Sbjct: 69  GVGRINSKSNQQQAPESLNQYTMYTPRECSPSLESHHSRFSHPAHDIRGLNVPDMR 124

>BCDO1_MOUSE (Q9JJS6) Beta,beta-carotene 15,15'-monooxygenase (EC 1.14.99.36)|
           (Beta-carotene dioxygenase 1)
          Length = 566

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +1

Query: 7   GKIVQNIQPNMFISTIHPAKHVQLNEHPTDPIRPDPRYKQNKRKANTQASSL 162
           G  + +   N    T    + V+ ++HPTDP  P+  + +N   A    SSL
Sbjct: 515 GLFIPDADWNAVKQTPAETQEVENSDHPTDPTAPELSHSENDFTAGHGGSSL 566

>UBP53_MOUSE (P15975) Inactive ubiquitin carboxyl-terminal hydrolase 53|
           (Ubiquitin-specific peptidase 53) (Per-hexamer repeat
           protein 3)
          Length = 1069

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   GFGKIVQNIQPNMFISTIHPAKHVQLNEH 87
           GF K +Q+++ +  I  +HP  HVQ+  H
Sbjct: 747 GFRKELQDLEADDKIHELHPESHVQIKSH 775

>TERM_ADEB2 (O55438) DNA terminal protein (Bellett protein) (pTP protein)|
          Length = 620

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
 Frame = +2

Query: 149 KQAPSPPKQKCLALPCTCIYICSRVHKHTQHD--------LYIIQVPVKRRSTC 286
           K  P  P+Q+ L+LPC C ++ + + K  + D        L + QVP +  + C
Sbjct: 255 KHLPLAPEQE-LSLPCDCFWLDAFIQKFAESDQAAEIDEALRLQQVPTQTLTKC 307

>RPOC2_MESVI (Q9MUS7) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)|
           (PEP) (Plastid-encoded RNA polymerase beta'' subunit)
           (RNA polymerase beta'' subunit)
          Length = 1223

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2

Query: 197 YKEGQDIFAWEERELACVFALRL 129
           YK+GQ I AW+  E+A +F LRL
Sbjct: 790 YKDGQRIHAWQSMEIAKIF-LRL 811

>MCAT_BACSU (P80878) Probable manganese catalase (EC 1.11.1.6) (General stress|
           protein 80) (GSP80)
          Length = 273

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  KHVQLNEHPTDPIRPDPRYKQNKRK 138
           KH ++ +HP  P RPDP + +  ++
Sbjct: 3   KHTKMLQHPAKPDRPDPLFAKKMQE 27

>AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L)|
          Length = 879

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +1

Query: 4   FGKIVQNIQPNMFISTIHPAKHVQLN---EHPTDPIRPDPRYKQNKRKANTQASSLSSQA 174
           F ++++NI   +F +T+HPA H +L+   EH       D   K      N ++    +  
Sbjct: 590 FQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWV 649

Query: 175 KMSCPSLYVYIY 210
           +   P    Y+Y
Sbjct: 650 EEDNPPYAYYLY 661

>SYCP2_RAT (O70608) Synaptonemal complex protein 2 (SCP-2) (Synaptonemal|
           complex lateral element protein) (rnSCP2)
          Length = 1505

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 52  IHPAKHVQLNEHPTDPIRPDPRYKQNKRKANTQASSLSSQAKMSCPSLYV 201
           IH  +   L +  T+P+ PD    Q  RK +    +  S+ KMS  S+ V
Sbjct: 435 IHLKEKSNLQKKLTNPLEPDNSSSQRDRKNSQDEITTPSRKKMSEASMIV 484

>AMPD2_MOUSE (Q9DBT5) AMP deaminase 2 (EC 3.5.4.6)|
          Length = 798

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +1

Query: 4   FGKIVQNIQPNMFISTIHPAKHVQLN---EHPTDPIRPDPRYKQNKRKANTQASSLSSQA 174
           F ++++NI   +F +T+HPA H +L+   EH       D   K      N ++    +  
Sbjct: 510 FQEMLENIFLPLFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWV 569

Query: 175 KMSCPSLYVYIY 210
           +   P    Y+Y
Sbjct: 570 EEDNPPYAYYLY 581


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,763,115
Number of Sequences: 219361
Number of extensions: 948583
Number of successful extensions: 2576
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)