ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018629.1| Zea mays clone EL01N0503A06.d mRNA sequence 52 0.001
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
3dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
4dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
5emb|AL359921.13| Human DNA sequence from clone RP11-385F5 on chr... 44 0.24
6emb|AL355607.10| Human DNA sequence from clone RP11-367F23 on ch... 44 0.24
7gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, com... 44 0.24
8gb|AC158498.3| Medicago truncatula chromosome 2 BAC clone mth2-6... 44 0.24
9emb|BX649568.15| Zebrafish DNA sequence from clone CH211-122A20 ... 44 0.24
10dbj|AB060835.1| Macaca fascicularis brain cDNA clone:QtrA-10746,... 44 0.24
11gb|AY491981.1| Toxoplasma gondii TATA-binding protein mRNA, comp... 42 0.95
12emb|AL392088.12| Human DNA sequence from clone RP5-964H19 on chr... 42 0.95
13emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on ch... 42 0.95
14emb|BX119905.13| Zebrafish DNA sequence from clone CH211-209H17,... 42 0.95
15gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome... 40 3.8
16gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp... 40 3.8
17gb|AC126593.5| Rattus norvegicus 13 BAC CH230-103N15 (Children's... 40 3.8
18gb|AF338713.2| Casuarius casuarius mitochondrion, complete genome 40 3.8
19gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome... 40 3.8
20gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, com... 40 3.8
21gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, com... 40 3.8
22gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosom... 40 3.8
23gb|AC115632.4| Mus musculus BAC clone RP24-136O10 from chromosom... 40 3.8
24gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, comple... 40 3.8
25gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, comp... 40 3.8
26emb|Z82210.2|HS431C21 Human DNA sequence from clone RP3-431C21 o... 40 3.8
27emb|AL365229.13| Human DNA sequence from clone RP11-723K16 on ch... 40 3.8
28emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on ch... 40 3.8
29emb|AL137804.7| Human DNA sequence from clone RP1-296L11 on chro... 40 3.8
30emb|AL031735.9|HS69M21 Human DNA sequence from clone RP1-69M21 o... 40 3.8
31emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 3.8
32gb|AC160756.7| Mus musculus chromosome 15, clone RP23-158H4, com... 40 3.8
33emb|CR936705.1| Homo sapiens mRNA; cDNA DKFZp686C01106 (from clo... 40 3.8
34emb|CR388055.6| Zebrafish DNA sequence from clone DKEY-56D12 in ... 40 3.8
35gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, comp... 40 3.8
36gb|AE014179.1| Mus musculus piebald deletion region section 7 of... 40 3.8
37gb|AC016822.9| Homo sapiens chromosome 10 clone RP11-430K23, com... 40 3.8
38gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map... 40 3.8
39gb|AC013650.8| Homo sapiens chromosome 8, clone RP11-24L2, compl... 40 3.8
40gb|AC090814.2| Homo sapiens chromosome 8, clone RP11-1152K2, com... 40 3.8
41gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosom... 40 3.8
42gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42... 40 3.8
43gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, com... 40 3.8
44gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosom... 40 3.8
45gb|AC154701.2| Mus musculus BAC clone RP24-344N20 from chromosom... 40 3.8
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
47dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
48gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, r... 40 3.8
49gb|AC133109.3| Homo sapiens BAC clone RP11-698M13 from 2, comple... 40 3.8
50gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, comple... 40 3.8
51gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell ... 40 3.8
52gb|AF202552.1|F202550S03 Homo sapiens DNA methyltransferase (DNM... 40 3.8
53gb|AC114398.3| Homo sapiens chromosome 3 clone RP11-495E23, comp... 40 3.8
54gb|AC073911.38| Homo sapiens 12 BAC RP11-386I8 (Roswell Park Can... 40 3.8
55dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
56dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
57emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chro... 40 3.8
58gb|AF065605.1|AF065605 Giardia intestinalis BC2-ORF1/B (bc2-orf1... 40 3.8
59emb|BX950866.15| Zebrafish DNA sequence from clone DKEY-3J24 in ... 40 3.8
60emb|AL714031.7| Zebrafish DNA sequence from clone BUSM1-60J23 in... 40 3.8
61gb|AC010077.1|AC010077 Homo sapiens chromosome 19, cosmid R28278... 40 3.8
62gb|AF119248.1|AF119248 Homo sapiens DNA methyltransferase (DNMT1... 40 3.8
63gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 ... 40 3.8
64emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-8... 40 3.8
65gb|AC137513.3| Mus musculus BAC clone RP24-460O22 from 15, compl... 40 3.8
66gb|AC138459.3| Mus musculus BAC clone RP23-335K20 from 10, compl... 40 3.8
67emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, ... 40 3.8
68emb|CT025670.8| Mouse DNA sequence from clone RP24-384G18 on chr... 40 3.8
69gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosom... 40 3.8 
>gb|BT018629.1| Zea mays clone EL01N0503A06.d mRNA sequence
          Length = 1968

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 191  ccttgtacgtgtatatatatatgcagtagggtgcacaa 228
            |||||||||||||| ||||| ||||||| |||||||||
Sbjct: 1600 ccttgtacgtgtatgtatatctgcagtaaggtgcacaa 1563
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                             
Query: 112      cctaggtataaacagaacaaacgcaaagcaaacacacaagcaagc 156
                |||||||| ||| | || |||| ||||||||||||||||||||||
Sbjct: 30505611 cctaggtacaaaaataagaaacacaaagcaaacacacaagcaagc 30505567



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 41/47 (87%), Gaps = 4/47 (8%)
 Strand = Plus / Minus

                                                               
Query: 191      ccttgtacgtgtatata----tatatgcagtagggtgcacaaacaca 233
                |||||||||||||||||    ||| ||||||| ||||||||||||||
Sbjct: 30505528 ccttgtacgtgtatatatatttatctgcagtaaggtgcacaaacaca 30505482
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>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0069C14
          Length = 150579

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 112  cctaggtataaacagaacaaacgcaaagcaaacacacaagcaagc 156
            |||||||| ||| | || |||| ||||||||||||||||||||||
Sbjct: 4174 cctaggtacaaaaataagaaacacaaagcaaacacacaagcaagc 4130



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 41/47 (87%), Gaps = 4/47 (8%)
 Strand = Plus / Minus

                                                           
Query: 191  ccttgtacgtgtatata----tatatgcagtagggtgcacaaacaca 233
            |||||||||||||||||    ||| ||||||| ||||||||||||||
Sbjct: 4091 ccttgtacgtgtatatatatttatctgcagtaaggtgcacaaacaca 4045
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>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017G10
          Length = 166700

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 112    cctaggtataaacagaacaaacgcaaagcaaacacacaagcaagc 156
              |||||||| ||| | || |||| ||||||||||||||||||||||
Sbjct: 142972 cctaggtacaaaaataagaaacacaaagcaaacacacaagcaagc 142928



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 41/47 (87%), Gaps = 4/47 (8%)
 Strand = Plus / Minus

                                                             
Query: 191    ccttgtacgtgtatata----tatatgcagtagggtgcacaaacaca 233
              |||||||||||||||||    ||| ||||||| ||||||||||||||
Sbjct: 142889 ccttgtacgtgtatatatatttatctgcagtaaggtgcacaaacaca 142843
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>emb|AL359921.13| Human DNA sequence from clone RP11-385F5 on chromosome 1 Contains a novel
              gene, the LGALS8 gene for lectin, galactoside-binding,
              soluble, 8 (galectin 8), the gene for protein BAP28
              (FLJ10359), a novel gene, the 5' end of the ACTN2 gene for
              actinin, alpha 2 and three CpG islands, complete sequence
          Length = 213757

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 165    ctcccaagcaaaaatgtcttgc 186
              ||||||||||||||||||||||
Sbjct: 158401 ctcccaagcaaaaatgtcttgc 158380
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>emb|AL355607.10| Human DNA sequence from clone RP11-367F23 on chromosome 9 Contains a
            novel gene, complete sequence
          Length = 113308

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  caaagcaaacacacaagcaagc 156
            ||||||||||||||||||||||
Sbjct: 7438 caaagcaaacacacaagcaagc 7459
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>gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, complete sequence
          Length = 210557

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   caaagcaaacacacaagcaagc 156
             ||||||||||||||||||||||
Sbjct: 59185 caaagcaaacacacaagcaagc 59206
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>gb|AC158498.3| Medicago truncatula chromosome 2 BAC clone mth2-65n13, complete
             sequence
          Length = 124573

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 124   cagaacaaacgcaaagcaaaca 145
             ||||||||||||||||||||||
Sbjct: 62906 cagaacaaacgcaaagcaaaca 62885
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>emb|BX649568.15| Zebrafish DNA sequence from clone CH211-122A20 in linkage group 18,
              complete sequence
          Length = 194885

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 194    tgtacgtgtatatatatatgca 215
              ||||||||||||||||||||||
Sbjct: 178683 tgtacgtgtatatatatatgca 178704
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>dbj|AB060835.1| Macaca fascicularis brain cDNA clone:QtrA-10746, full insert
           sequence
          Length = 2071

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 191 ccttgtacgtgtatatatatat 212
           ||||||||||||||||||||||
Sbjct: 465 ccttgtacgtgtatatatatat 444
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>gb|AY491981.1| Toxoplasma gondii TATA-binding protein mRNA, complete cds
          Length = 1369

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 195 gtacgtgtatatatatatgca 215
           |||||||||||||||||||||
Sbjct: 896 gtacgtgtatatatatatgca 916
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>emb|AL392088.12| Human DNA sequence from clone RP5-964H19 on chromosome 1 Contains the
            3' end of the gene for a novel protein similar to
            FLJ32883 containing DUF1220 domains, a suppression of
            tumorigenicity 13 (colon carcinoma) (Hsp70 interacting
            protein) (ST13) pseudogene, a novel pseudogene and two
            CpG islands, complete sequence
          Length = 74877

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  gtgtatatatatatgcagtag 219
            |||||||||||||||||||||
Sbjct: 2365 gtgtatatatatatgcagtag 2385
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>emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on chromosome 1 Contains the
             5' end of the SLC25A24 gene for solute carrier family 25
             (mitochondrial carrier; phosphate carrier) member 24, the
             gene for a novel protein, two novel genes, a pseudogene
             similar to solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 (SLC25A24) and two
             CpG islands, complete sequence
          Length = 188622

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   gtgtatatatatatgcagtag 219
             |||||||||||||||||||||
Sbjct: 60571 gtgtatatatatatgcagtag 60551
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>emb|BX119905.13| Zebrafish DNA sequence from clone CH211-209H17, complete sequence
          Length = 50366

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   acagaacaaacgcaaagcaaa 143
             |||||||||||||||||||||
Sbjct: 15946 acagaacaaacgcaaagcaaa 15966
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>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence
          Length = 204750

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    gtgcacaaacacacacaaca 240
              ||||||||||||||||||||
Sbjct: 162030 gtgcacaaacacacacaaca 162049
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>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence
          Length = 175313

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 121   aaacagaacaaacgcaaagcaaacacacaagcaagc 156
             ||||| |||||||  ||||||||||||||| |||||
Sbjct: 64642 aaacaaaacaaacaaaaagcaaacacacaaacaagc 64677
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>gb|AC126593.5| Rattus norvegicus 13 BAC CH230-103N15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 169168

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgtatatatatatgcagtag 219
             ||||||||||||||||||||
Sbjct: 31955 tgtatatatatatgcagtag 31974
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>gb|AF338713.2| Casuarius casuarius mitochondrion, complete genome
          Length = 16756

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 127   aacaaacgcaaagcaaacacacaagcaa 154
             ||||||| || |||||||||||||||||
Sbjct: 16681 aacaaacacacagcaaacacacaagcaa 16708
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>gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome 15, complete sequence
          Length = 209081

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    aagcaaacacacaagcaagc 156
              ||||||||||||||||||||
Sbjct: 168632 aagcaaacacacaagcaagc 168613
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>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence
          Length = 205237

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 121    aaacagaacaaacgcaaagcaaacacacaagcaagc 156
              ||||| |||||||  ||||||||||||||| |||||
Sbjct: 146434 aaacaaaacaaacaaaaagcaaacacacaaacaagc 146469
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>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tgtacgtgtatatatatatg 213
              ||||||||||||||||||||
Sbjct: 184373 tgtacgtgtatatatatatg 184392
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>gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosome 14, complete sequence
          Length = 204590

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    aagcaaacacacaagcaagc 156
              ||||||||||||||||||||
Sbjct: 124032 aagcaaacacacaagcaagc 124013
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>gb|AC115632.4| Mus musculus BAC clone RP24-136O10 from chromosome 13, complete
             sequence
          Length = 166481

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cacaaacacacacaacatga 243
             ||||||||||||||||||||
Sbjct: 39816 cacaaacacacacaacatga 39797
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>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence
          Length = 216326

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    cacaaacacacacaacatga 243
              ||||||||||||||||||||
Sbjct: 132068 cacaaacacacacaacatga 132049
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>gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, complete sequence
          Length = 198009

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gggtttggcaaaatagtgca 20
            ||||||||||||||||||||
Sbjct: 4209 gggtttggcaaaatagtgca 4190
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>emb|Z82210.2|HS431C21 Human DNA sequence from clone RP3-431C21 on chromosome Xq21 Contains a
             ribosomal protein L7 (RPL7) pseudogene, complete sequence
          Length = 118426

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tacgtgtatatatatatgca 215
             ||||||||||||||||||||
Sbjct: 94159 tacgtgtatatatatatgca 94140
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>emb|AL365229.13| Human DNA sequence from clone RP11-723K16 on chromosome 20 Contains the
             5' end of the CDH4 gene for retinal cadherin 4 type 1
             (R-cadherin), complete sequence
          Length = 121478

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cagaacaaacgcaaagcaaa 143
             ||||||||||||||||||||
Sbjct: 61353 cagaacaaacgcaaagcaaa 61334
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>emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    gcacaaacacacacaacatg 242
              ||||||||||||||||||||
Sbjct: 138696 gcacaaacacacacaacatg 138677
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>emb|AL137804.7| Human DNA sequence from clone RP1-296L11 on chromosome 11p13-14.1
             Contains STSs, GSSs and CpG islands, complete sequence
          Length = 107499

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gtgcacaaacacacacaaca 240
             ||||||||||||||||||||
Sbjct: 43554 gtgcacaaacacacacaaca 43535
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>emb|AL031735.9|HS69M21 Human DNA sequence from clone RP1-69M21 on chromosome 1p36.21-36.23
              Contains the 3'end of a  novel gene and a novel gene,
              complete sequence
          Length = 125937

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 121    aaacagaacaaacgcaaagcaaacacac 148
              ||||||||||||| ||||| ||||||||
Sbjct: 121596 aaacagaacaaacacaaagaaaacacac 121623
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ccgatccgatccgacccgac 111
              ||||||||||||||||||||
Sbjct: 185984 ccgatccgatccgacccgac 186003
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>gb|AC160756.7| Mus musculus chromosome 15, clone RP23-158H4, complete sequence
          Length = 194707

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tgtacgtgtatatatatatg 213
             ||||||||||||||||||||
Sbjct: 49547 tgtacgtgtatatatatatg 49566
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>emb|CR936705.1| Homo sapiens mRNA; cDNA DKFZp686C01106 (from clone DKFZp686C01106)
          Length = 9298

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  gcacaaacacacacaacatg 242
            ||||||||||||||||||||
Sbjct: 5703 gcacaaacacacacaacatg 5684
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>emb|CR388055.6| Zebrafish DNA sequence from clone DKEY-56D12 in linkage group 5, complete
              sequence
          Length = 190426

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 192    cttgtacgtgtatatatatatgca 215
              |||||| |||||||||||||||||
Sbjct: 172385 cttgtatgtgtatatatatatgca 172362
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>gb|AC012182.7| Homo sapiens chromosome 16 clone RP11-332G1, complete sequence
          Length = 188926

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tggcaaaatagtgcaaaaca 25
              ||||||||||||||||||||
Sbjct: 105986 tggcaaaatagtgcaaaaca 106005
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>gb|AE014179.1| Mus musculus piebald deletion region section 7 of 11 of the complete
            sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  aagcaaacacacaagcaagc 156
            ||||||||||||||||||||
Sbjct: 4103 aagcaaacacacaagcaagc 4122
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>gb|AC016822.9| Homo sapiens chromosome 10 clone RP11-430K23, complete sequence
          Length = 172367

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    tacgtgtatatatatatgca 215
              ||||||||||||||||||||
Sbjct: 105680 tacgtgtatatatatatgca 105661
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>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
             sequence
          Length = 126386

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   tatatatatatgcagtaggg 221
             ||||||||||||||||||||
Sbjct: 71189 tatatatatatgcagtaggg 71170
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>gb|AC013650.8| Homo sapiens chromosome 8, clone RP11-24L2, complete sequence
          Length = 147242

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   tacgtgtatatatatatgcagtag 219
             |||||||||||||||||| |||||
Sbjct: 32712 tacgtgtatatatatatgtagtag 32735
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>gb|AC090814.2| Homo sapiens chromosome 8, clone RP11-1152K2, complete sequence
          Length = 142938

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 196   tacgtgtatatatatatgcagtag 219
             |||||||||||||||||| |||||
Sbjct: 57431 tacgtgtatatatatatgtagtag 57408
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>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete sequence
          Length = 188929

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    tgtacgtgtatatatatatg 213
              ||||||||||||||||||||
Sbjct: 165912 tgtacgtgtatatatatatg 165893
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>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone
             BACR07J20, complete sequence
          Length = 181771

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    ccgatccgatccgacccgac 111
             ||||||||||||||||||||
Sbjct: 82788 ccgatccgatccgacccgac 82769
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>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence
          Length = 205231

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tgtacgtgtatatatatatg 213
             ||||||||||||||||||||
Sbjct: 60968 tgtacgtgtatatatatatg 60949
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>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete
             sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tccagccaaacatgtgcaat 76
             ||||||||||||||||||||
Sbjct: 20665 tccagccaaacatgtgcaat 20646
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>gb|AC154701.2| Mus musculus BAC clone RP24-344N20 from chromosome 14, complete
             sequence
          Length = 169056

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 194   tgtacgtgtatatatatatgcagt 217
             |||| |||||||||||||||||||
Sbjct: 88503 tgtatgtgtatatatatatgcagt 88526
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     gcacaaacacacacaacatg 242
               ||||||||||||||||||||
Sbjct: 2905156 gcacaaacacacacaacatg 2905137
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       gatccgatccgacccgaccc 113
                ||||||||||||||||||||
Sbjct: 13336880 gatccgatccgacccgaccc 13336861
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>gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone
             BACR04F03, complete sequence
          Length = 150587

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    ccgatccgatccgacccgac 111
             ||||||||||||||||||||
Sbjct: 31877 ccgatccgatccgacccgac 31858
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>gb|AC133109.3| Homo sapiens BAC clone RP11-698M13 from 2, complete sequence
          Length = 56227

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cgtgtatatatatatgcagt 217
            ||||||||||||||||||||
Sbjct: 4239 cgtgtatatatatatgcagt 4258
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>gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, complete sequence
          Length = 199218

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tgtacgtgtatatatatatg 213
             ||||||||||||||||||||
Sbjct: 71125 tgtacgtgtatatatatatg 71106
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>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168134

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tgtacgtgtatatatatatg 213
              ||||||||||||||||||||
Sbjct: 108615 tgtacgtgtatatatatatg 108634
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>gb|AF202552.1|F202550S03 Homo sapiens DNA methyltransferase (DNMT1) gene, exons 2, 3, and 4
          Length = 4405

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  tacgtgtatatatatatgca 215
            ||||||||||||||||||||
Sbjct: 1663 tacgtgtatatatatatgca 1682
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>gb|AC114398.3| Homo sapiens chromosome 3 clone RP11-495E23, complete sequence
          Length = 233454

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tacgtgtatatatatatgca 215
             ||||||||||||||||||||
Sbjct: 43057 tacgtgtatatatatatgca 43038
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>gb|AC073911.38| Homo sapiens 12 BAC RP11-386I8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144266

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   tgcacaaacacacacaacat 241
             ||||||||||||||||||||
Sbjct: 52687 tgcacaaacacacacaacat 52706
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>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088D01
          Length = 146144

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gatccgatccgacccgaccc 113
             ||||||||||||||||||||
Sbjct: 77238 gatccgatccgacccgaccc 77219
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0050B07
          Length = 142134

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   gcacaaacacacacaacatg 242
             ||||||||||||||||||||
Sbjct: 75443 gcacaaacacacacaacatg 75424
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>emb|AL603926.6| Human DNA sequence from clone RP11-356L9 on chromosome 22, complete
             sequence
          Length = 180455

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   tgcacaaacacacacaacat 241
             ||||||||||||||||||||
Sbjct: 66686 tgcacaaacacacacaacat 66705
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>gb|AF065605.1|AF065605 Giardia intestinalis BC2-ORF1/B (bc2-orf1) gene, bc2-orf1/B allele,
           partial cds; BC2-ORF2/B (bc2-orf2) gene, bc2-orf2/B
           allele, complete cds; and BC2-ORF3/B (bc2-orf3) gene,
           bc2-orf3/B allele, complete cds
          Length = 3383

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 31  ccaaacatgtttataagcaccatt 54
           ||||| ||||||||||||||||||
Sbjct: 747 ccaaatatgtttataagcaccatt 724
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>emb|BX950866.15| Zebrafish DNA sequence from clone DKEY-3J24 in linkage group 19,
             complete sequence
          Length = 96656

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   cacaaacacacacaacatga 243
             ||||||||||||||||||||
Sbjct: 12035 cacaaacacacacaacatga 12054
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>emb|AL714031.7| Zebrafish DNA sequence from clone BUSM1-60J23 in linkage group 9,
             complete sequence
          Length = 109720

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tgtacgtgtatatatatatg 213
             ||||||||||||||||||||
Sbjct: 68008 tgtacgtgtatatatatatg 68027
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>gb|AC010077.1|AC010077 Homo sapiens chromosome 19, cosmid R28278, complete sequence
          Length = 46934

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tacgtgtatatatatatgca 215
             ||||||||||||||||||||
Sbjct: 41600 tacgtgtatatatatatgca 41581
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>gb|AF119248.1|AF119248 Homo sapiens DNA methyltransferase (DNMT1) gene, partial sequence
          Length = 2380

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  tacgtgtatatatatatgca 215
            ||||||||||||||||||||
Sbjct: 1663 tacgtgtatatatatatgca 1682
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>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete
              sequence
          Length = 348873

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     ccgatccgatccgacccgac 111
              ||||||||||||||||||||
Sbjct: 118999 ccgatccgatccgacccgac 118980
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>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 216647

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    caaagcaaacacacaagcaa 154
              ||||||||||||||||||||
Sbjct: 115886 caaagcaaacacacaagcaa 115905
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>gb|AC137513.3| Mus musculus BAC clone RP24-460O22 from 15, complete sequence
          Length = 179386

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tgtacgtgtatatatatatg 213
             ||||||||||||||||||||
Sbjct: 15187 tgtacgtgtatatatatatg 15206
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>gb|AC138459.3| Mus musculus BAC clone RP23-335K20 from 10, complete sequence
          Length = 222461

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     tccagccaaacatgtgcaat 76
              ||||||||||||||||||||
Sbjct: 114558 tccagccaaacatgtgcaat 114577
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>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence
          Length = 198052

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cacaaacacacacaacatga 243
             ||||||||||||||||||||
Sbjct: 30697 cacaaacacacacaacatga 30678
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>emb|CT025670.8| Mouse DNA sequence from clone RP24-384G18 on chromosome 17, complete
              sequence
          Length = 199300

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    tgtacgtgtatatatatatg 213
              ||||||||||||||||||||
Sbjct: 196340 tgtacgtgtatatatatatg 196359
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>gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosome 9, complete
            sequence
          Length = 198367

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  gtgcacaaacacacacaaca 240
            ||||||||||||||||||||
Sbjct: 4563 gtgcacaaacacacacaaca 4582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,932,901
Number of Sequences: 3902068
Number of extensions: 12932901
Number of successful extensions: 282272
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 281753
Number of HSP's gapped (non-prelim): 516
length of query: 288
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 266
effective length of database: 17,147,199,772
effective search space: 4561155139352
effective search space used: 4561155139352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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