ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, com... 42 1.4
2gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, c... 42 1.4
3emb|Z95327.1|HS347M6 Human DNA sequence from clone RP3-347M6 on ... 42 1.4
4emb|AL512696.1|HSM802886 Homo sapiens genomic DNA; cDNA DKFZp547... 42 1.4
5gb|AC021678.13| Homo sapiens chromosome 8, clone RP11-380I10, co... 42 1.4
6gb|AC084261.5| Homo sapiens chromosome 8, clone RP3-335L1, compl... 42 1.4
7dbj|AK169512.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.4
8gb|AC157516.2| Mus musculus BAC clone RP24-279F18 from chromosom... 42 1.4
9dbj|AK079636.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 42 1.4
10gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complet... 42 1.4
11gb|AC146753.1| Gallus gallus BAC clone CH261-4N19 from chromosom... 42 1.4
12gb|AY567813.2| Oncorhynchus mykiss HoxD10ai (Hox) gene, partial cds 42 1.4
13emb|AL773547.6| Mouse DNA sequence from clone RP23-243E14 on chr... 42 1.4
14emb|Z78021.1|HSU85A3 Human DNA sequence from clone LL0XNC01-85A3... 42 1.4
15gb|AC164552.4| Mus musculus BAC clone RP23-352M7 from chromosome... 42 1.4
16gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, co... 40 5.6
17ref|XM_982128.1| PREDICTED: Mus musculus RIKEN cDNA B230339M05 g... 40 5.6
18ref|XM_921698.2| PREDICTED: Mus musculus RIKEN cDNA B230339M05 g... 40 5.6
19ref|XM_902776.2| PREDICTED: Mus musculus RIKEN cDNA B230339M05 g... 40 5.6
20emb|Z30215.2|CEF40F12 Caenorhabditis elegans Cosmid F40F12, comp... 40 5.6
21emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 i... 40 5.6
22gb|AC004537.1| Homo sapiens PAC clone RP5-872F7 from 7, complete... 40 5.6
23gb|AC018464.9| Homo sapiens BAC clone RP11-328M22 from 7, comple... 40 5.6
24gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, co... 40 5.6
25emb|CR450782.5| Zebrafish DNA sequence from clone CH211-245B21 i... 40 5.6
26emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in... 40 5.6
27emb|AL161772.17| Human DNA sequence from clone RP11-172H24 on ch... 40 5.6
28gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's H... 40 5.6
29emb|BX927315.10| Zebrafish DNA sequence from clone CH211-215B16 ... 40 5.6
30emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in... 40 5.6
31gb|AC113267.14| Papio anubis clone rp41-174i6, complete sequence 40 5.6
32gb|AC108682.2| Homo sapiens Xp BAC RP11-325L9 (Roswell Park Canc... 40 5.6
33gb|AC096631.2| Homo sapiens chromosome 1 clone RP11-16L9, comple... 40 5.6
34dbj|AK136970.1| Mus musculus 12 days embryo embryonic body betwe... 40 5.6
35gb|AC022878.8| Homo sapiens chromosome 11, clone RP11-413N13, co... 40 5.6
36dbj|AK046067.1| Mus musculus adult male corpora quadrigemina cDN... 40 5.6
37gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, co... 40 5.6
38gb|AC154476.2| Mus musculus BAC clone RP24-133E16 from 17, compl... 40 5.6
39emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in... 40 5.6
40gb|AC121135.9| Mus musculus chromosome 18, clone RP23-328A22, co... 40 5.6
41emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderop... 40 5.6
42dbj|AK114562.1| Ciona intestinalis cDNA, clone:cieg006m07, full ... 40 5.6
43gb|U53686.1|CCJAK1S02 Cyprinus carpio JAK1 kinase (JAK1) gene, e... 40 5.6
44emb|AL645491.15| Mouse DNA sequence from clone RP23-10H1 on chro... 40 5.6
45emb|AL627408.13| Mouse DNA sequence from clone RP23-279G21 on ch... 40 5.6
46emb|AL844513.8| Mouse DNA sequence from clone RP23-132A3 on chro... 40 5.6 
>gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, complete sequence
          Length = 158943

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    ggttataccaaccatggattc 68
             |||||||||||||||||||||
Sbjct: 42726 ggttataccaaccatggattc 42746
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>gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, complete sequence
          Length = 184010

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    ggttataccaaccatggattc 68
             |||||||||||||||||||||
Sbjct: 62242 ggttataccaaccatggattc 62222
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>emb|Z95327.1|HS347M6 Human DNA sequence from clone RP3-347M6 on chromosome Xq22 Contains a
             peptidylprolyl isomerase A (cyclophilin A) (PPIA)
             pseudogene, a RAD21 homolog (S. pombe) (LOC139319)
             pseudogene and the 5' end of the CSTF2 gene for cleavage
             stimulation factor (3' pre-RNA, subunit 2, 64kDa),
             complete sequence
          Length = 56583

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   aaagctgttacaacaacaaaatgta 130
             ||||||||||||| |||||||||||
Sbjct: 41548 aaagctgttacaagaacaaaatgta 41524
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>emb|AL512696.1|HSM802886 Homo sapiens genomic DNA; cDNA DKFZp547A234 (from clone DKFZp547A234)
          Length = 3244

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  acaacaacaaaatgtaacaaa 135
            |||||||||||||||||||||
Sbjct: 2013 acaacaacaaaatgtaacaaa 2033
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>gb|AC021678.13| Homo sapiens chromosome 8, clone RP11-380I10, complete sequence
          Length = 181731

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 115    acaacaacaaaatgtaacaaacatt 139
              |||||||||||||| ||||||||||
Sbjct: 122388 acaacaacaaaatgaaacaaacatt 122364
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>gb|AC084261.5| Homo sapiens chromosome 8, clone RP3-335L1, complete sequence
          Length = 159212

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 115    acaacaacaaaatgtaacaaacatt 139
              |||||||||||||| ||||||||||
Sbjct: 120122 acaacaacaaaatgaaacaaacatt 120146
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>dbj|AK169512.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length
          enriched library, clone:A630065J24 product:hypothetical
          protein, full insert sequence
          Length = 2498

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 48 ggttataccaaccatggattc 68
          |||||||||||||||||||||
Sbjct: 34 ggttataccaaccatggattc 14
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>gb|AC157516.2| Mus musculus BAC clone RP24-279F18 from chromosome 9, complete sequence
          Length = 175493

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    catgtctttggttataccaac 59
             |||||||||||||||||||||
Sbjct: 10376 catgtctttggttataccaac 10396
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>dbj|AK079636.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330086O19 product:unclassifiable, full
            insert sequence
          Length = 2827

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 48   ggttataccaaccatggattc 68
            |||||||||||||||||||||
Sbjct: 1661 ggttataccaaccatggattc 1681
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>gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complete sequence
          Length = 190462

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   acaacaacaaaatgtaacaaa 135
             |||||||||||||||||||||
Sbjct: 82849 acaacaacaaaatgtaacaaa 82869
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>gb|AC146753.1| Gallus gallus BAC clone CH261-4N19 from chromosome unknown, complete
              sequence
          Length = 231376

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    agtatcatgctcctttgttcc 257
              |||||||||||||||||||||
Sbjct: 131205 agtatcatgctcctttgttcc 131225
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>gb|AY567813.2| Oncorhynchus mykiss HoxD10ai (Hox) gene, partial cds
          Length = 1566

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 14   aatacagaaatactccagcag 34
            |||||||||||||||||||||
Sbjct: 1006 aatacagaaatactccagcag 1026
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>emb|AL773547.6| Mouse DNA sequence from clone RP23-243E14 on chromosome X, complete
              sequence
          Length = 161816

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    acaacaacaaaatgtaacaaa 135
              |||||||||||||||||||||
Sbjct: 121958 acaacaacaaaatgtaacaaa 121978
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>emb|Z78021.1|HSU85A3 Human DNA sequence from clone LL0XNC01-85A3 on chromosome X, complete
            sequence
          Length = 37652

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 106  aaagctgttacaacaacaaaatgta 130
            ||||||||||||| |||||||||||
Sbjct: 1362 aaagctgttacaagaacaaaatgta 1386
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>gb|AC164552.4| Mus musculus BAC clone RP23-352M7 from chromosome 9, complete sequence
          Length = 169465

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     catgtctttggttataccaac 59
              |||||||||||||||||||||
Sbjct: 118322 catgtctttggttataccaac 118342
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>gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, complete sequence
          Length = 194834

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   acaacaacaaaatgtaacaa 134
             ||||||||||||||||||||
Sbjct: 22694 acaacaacaaaatgtaacaa 22675
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>ref|XM_982128.1| PREDICTED: Mus musculus RIKEN cDNA B230339M05 gene, transcript
            variant 1 (B230339M05Rik), mRNA
          Length = 3868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcaaacaaagctgttacaa 118
            ||||||||||||||||||||
Sbjct: 3078 agcaaacaaagctgttacaa 3059
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>ref|XM_921698.2| PREDICTED: Mus musculus RIKEN cDNA B230339M05 gene, transcript
            variant 10 (B230339M05Rik), mRNA
          Length = 3868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcaaacaaagctgttacaa 118
            ||||||||||||||||||||
Sbjct: 3078 agcaaacaaagctgttacaa 3059
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>ref|XM_902776.2| PREDICTED: Mus musculus RIKEN cDNA B230339M05 gene, transcript
            variant 4 (B230339M05Rik), mRNA
          Length = 3868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcaaacaaagctgttacaa 118
            ||||||||||||||||||||
Sbjct: 3078 agcaaacaaagctgttacaa 3059
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>emb|Z30215.2|CEF40F12 Caenorhabditis elegans Cosmid F40F12, complete sequence
          Length = 32881

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   tgaatgaaattgaataaaaa 180
             ||||||||||||||||||||
Sbjct: 23813 tgaatgaaattgaataaaaa 23794
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>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8,
             complete sequence
          Length = 207282

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    aactacaaacgaagcaaacaaagc 110
             ||||||||| ||||||||||||||
Sbjct: 93207 aactacaaaagaagcaaacaaagc 93184
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>gb|AC004537.1| Homo sapiens PAC clone RP5-872F7 from 7, complete sequence
          Length = 88872

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   actaaatgaatgaaattgaataaa 178
             ||||||||||||||| ||||||||
Sbjct: 77279 actaaatgaatgaaaatgaataaa 77256
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>gb|AC018464.9| Homo sapiens BAC clone RP11-328M22 from 7, complete sequence
          Length = 155862

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     accaagagtaacaatacagaaata 25
             ||||||||||| ||||||||||||
Sbjct: 22571 accaagagtaataatacagaaata 22594
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>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence
          Length = 206979

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 359    cttaccccaggagtgagcttcact 382
              |||||||||||||||||| |||||
Sbjct: 162745 cttaccccaggagtgagcctcact 162768
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>emb|CR450782.5| Zebrafish DNA sequence from clone CH211-245B21 in linkage group 3,
             complete sequence
          Length = 99702

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ttgtgctcctacttcccaac 292
             ||||||||||||||||||||
Sbjct: 79751 ttgtgctcctacttcccaac 79732
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>emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in linkage group 8,
             complete sequence
          Length = 203472

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   aatgaatgaaattgaataaa 178
             ||||||||||||||||||||
Sbjct: 34732 aatgaatgaaattgaataaa 34713
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>emb|AL161772.17| Human DNA sequence from clone RP11-172H24 on chromosome 13 Contains the
             3' end of the gene for polycystic kidney disease,
             autosomal recessive (Probe hTg737) (TG737), a novel
             pseudogene (FLJ124251 and FLJ14793), the 5' end of the
             IL17D gene for interleukin 17D and a CpG island, complete
             sequence
          Length = 125579

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 150   ttccaactaaatgaatgaaattga 173
             |||||||||||||||||| |||||
Sbjct: 68347 ttccaactaaatgaatgacattga 68370
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>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238669

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aaaatgtaacaaacattttt 142
              ||||||||||||||||||||
Sbjct: 100632 aaaatgtaacaaacattttt 100651
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>emb|BX927315.10| Zebrafish DNA sequence from clone CH211-215B16 in linkage group 2,
             complete sequence
          Length = 172122

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   atgaatgaaattgaataaaa 179
             ||||||||||||||||||||
Sbjct: 38552 atgaatgaaattgaataaaa 38571
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>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7,
              complete sequence
          Length = 163069

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    aacaaaatgtaacaaacatt 139
              ||||||||||||||||||||
Sbjct: 159661 aacaaaatgtaacaaacatt 159642
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>gb|AC113267.14| Papio anubis clone rp41-174i6, complete sequence
          Length = 154605

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  tcatgcaactgcaaccaagc 221
            ||||||||||||||||||||
Sbjct: 2280 tcatgcaactgcaaccaagc 2299
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>gb|AC108682.2| Homo sapiens Xp BAC RP11-325L9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 74143

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     agagtaacaatacagaaata 25
             ||||||||||||||||||||
Sbjct: 18700 agagtaacaatacagaaata 18719
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>gb|AC096631.2| Homo sapiens chromosome 1 clone RP11-16L9, complete sequence
          Length = 159322

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   atgtaacaaacatttttcaa 145
             ||||||||||||||||||||
Sbjct: 38989 atgtaacaaacatttttcaa 38970
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>dbj|AK136970.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430022D21 product:mitochondrial ribosomal protein
            S10, full insert sequence
          Length = 3883

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 359  cttaccccaggagtgagcttcact 382
            |||||||||||||||||| |||||
Sbjct: 1865 cttaccccaggagtgagcctcact 1888
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>gb|AC022878.8| Homo sapiens chromosome 11, clone RP11-413N13, complete sequence
          Length = 179652

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    actaaatgaatgaaattgaataaa 178
              ||||||| ||||||||||||||||
Sbjct: 130041 actaaatcaatgaaattgaataaa 130064
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>dbj|AK046067.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230339M05 product:hypothetical
            protein, full insert sequence
          Length = 3845

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agcaaacaaagctgttacaa 118
            ||||||||||||||||||||
Sbjct: 3055 agcaaacaaagctgttacaa 3036
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>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence
          Length = 194212

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    caacaaaatgtaacaaacattttt 142
              ||||||||||||||||||| ||||
Sbjct: 105582 caacaaaatgtaacaaacagtttt 105559
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>gb|AC154476.2| Mus musculus BAC clone RP24-133E16 from 17, complete sequence
          Length = 131820

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 359    cttaccccaggagtgagcttcact 382
              |||||||||||||||||| |||||
Sbjct: 110023 cttaccccaggagtgagcctcact 110000
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>emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in linkage group 7,
             complete sequence
          Length = 190715

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aacaaaatgtaacaaacatt 139
             ||||||||||||||||||||
Sbjct: 26708 aacaaaatgtaacaaacatt 26727
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>gb|AC121135.9| Mus musculus chromosome 18, clone RP23-328A22, complete sequence
          Length = 189515

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    acaacaacaaaatgtaacaa 134
              ||||||||||||||||||||
Sbjct: 168678 acaacaacaaaatgtaacaa 168659
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>emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderophore biosynthesis and
             transport gene cluster
          Length = 35691

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   taaaaacagtgccggtgttt 194
             ||||||||||||||||||||
Sbjct: 32201 taaaaacagtgccggtgttt 32182
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>dbj|AK114562.1| Ciona intestinalis cDNA, clone:cieg006m07, full insert sequence
          Length = 1470

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  aactaaatgaatgaaattga 173
            ||||||||||||||||||||
Sbjct: 1359 aactaaatgaatgaaattga 1340
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>gb|U53686.1|CCJAK1S02 Cyprinus carpio JAK1 kinase (JAK1) gene, exon 2
          Length = 840

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 156 ctaaatgaatgaaattgaataaaa 179
           |||||||||||||| |||||||||
Sbjct: 448 ctaaatgaatgaaaatgaataaaa 471
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>emb|AL645491.15| Mouse DNA sequence from clone RP23-10H1 on chromosome X, complete
             sequence
          Length = 127402

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   acaacaacaaaatgtaacaaacat 138
             |||||||||||| |||||||||||
Sbjct: 53247 acaacaacaaaaagtaacaaacat 53224
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>emb|AL627408.13| Mouse DNA sequence from clone RP23-279G21 on chromosome X, complete
             sequence
          Length = 98324

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   acaacaacaaaatgtaacaaacat 138
             |||||||||||| |||||||||||
Sbjct: 17471 acaacaacaaaaagtaacaaacat 17494
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>emb|AL844513.8| Mouse DNA sequence from clone RP23-132A3 on chromosome 2, complete
             sequence
          Length = 131184

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agcaaacaaagctgttacaa 118
             ||||||||||||||||||||
Sbjct: 81380 agcaaacaaagctgttacaa 81361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,732,873
Number of Sequences: 3902068
Number of extensions: 4732873
Number of successful extensions: 100956
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100866
Number of HSP's gapped (non-prelim): 90
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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