ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IBP_BUCAI (P57640) Small heat shock protein ibp 29 3.5
2UXAA_ECOLI (P42604) Altronate hydrolase (EC 4.2.1.7) (Altronic a... 28 7.8

>IBP_BUCAI (P57640) Small heat shock protein ibp|
          Length = 157

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 58  LNFSLNYKAKKKRNELD*RLLPASTKLGLPAVERP 162
           LNF+L++K K K+ EL   LL    +  +P  E+P
Sbjct: 106 LNFNLDHKIKVKKAELSLGLLKLDFECNIPEEEKP 140



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>UXAA_ECOLI (P42604) Altronate hydrolase (EC 4.2.1.7) (Altronic acid hydratase)|
          Length = 495

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 107 TEGCYLHLPNWGCQQLSGHEVEPRTRNINFSMHLF*HAGNELTVGI 244
           T+G +L    +GC QL    +  RT   N   H   +AG  L +G+
Sbjct: 154 TDGVFLFSHTYGCSQLGDDHINTRTMLQNMVRHP--NAGAVLVIGL 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,404,679
Number of Sequences: 219361
Number of extensions: 508820
Number of successful extensions: 1144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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