Clone Name | rbastl15h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC087731.2| Felis catus clone RP86-459O8, complete sequence | 44 | 0.25 | 2 | gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II sectio... | 42 | 0.97 | 3 | gb|AC110775.3| Homo sapiens BAC clone RP11-290O12 from 4, comple... | 40 | 3.8 | 4 | dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone... | 40 | 3.8 |
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>gb|AC087731.2| Felis catus clone RP86-459O8, complete sequence Length = 125661 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 aaactttgtttcagaagtgtaa 30 |||||||||||||||||||||| Sbjct: 57368 aaactttgtttcagaagtgtaa 57389
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete sequence. Sequence from clones T13E15, T14P1 Length = 87885 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 gataggcaactagtagtactttgtt 290 |||| |||||||||||||||||||| Sbjct: 86299 gataagcaactagtagtactttgtt 86275
>gb|AC110775.3| Homo sapiens BAC clone RP11-290O12 from 4, complete sequence Length = 210300 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 acatgaagataggcaactagtagt 282 ||||||||| |||||||||||||| Sbjct: 94212 acatgaagaaaggcaactagtagt 94235
>dbj|AP006077.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46B01, TM0116, complete sequence Length = 121207 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 taaatttctctctcaactat 78 |||||||||||||||||||| Sbjct: 101246 taaatttctctctcaactat 101227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,194,393 Number of Sequences: 3902068 Number of extensions: 2194393 Number of successful extensions: 37475 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37471 Number of HSP's gapped (non-prelim): 4 length of query: 294 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 272 effective length of database: 17,147,199,772 effective search space: 4664038337984 effective search space used: 4664038337984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)