ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478655.1| Oryza sativa (japonica cultivar-group), mRNA 105 9e-20
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
3dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 105 9e-20
4ref|XM_478666.1| Oryza sativa (japonica cultivar-group), mRNA 66 8e-08
5ref|XM_478664.1| Oryza sativa (japonica cultivar-group), mRNA 66 8e-08
6gb|AF432503.1|AF432503 Oryza sativa cellulose synthase-like prot... 66 8e-08
7gb|AF432502.1|AF432502 Oryza sativa cellulose synthase-like prot... 66 8e-08
8gb|AF435651.1| Oryza sativa CSLF2 mRNA, partial cds 66 8e-08
9dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
10dbj|AK100523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
11dbj|AK066835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
12ref|XM_478669.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
13gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like prot... 64 3e-07
14gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like prot... 64 3e-07
15ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative... 52 0.001
16gb|AY022882.1| Oryza sativa microsatellite MRG5207 containing (C... 52 0.001
17gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
18tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-li... 52 0.001
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
20dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
22ref|XM_478656.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
23dbj|AK067424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
24emb|Z75955.1|CER07B7 Caenorhabditis elegans Cosmid R07B7, comple... 44 0.29
25emb|BX059064.1|CNS09HQK Single read from an extremity of a full-... 42 1.1
26emb|BX059063.1|CNS09HQJ Single read from an extremity of a full-... 42 1.1
27emb|BX043157.1|CNS095GP Single read from an extremity of a full-... 42 1.1
28emb|BX043156.1|CNS095GO Single read from an extremity of a full-... 42 1.1
29gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 42 1.1
30gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, com... 42 1.1
31ref|XM_311307.2| Anopheles gambiae str. PEST ENSANGP00000017454 ... 42 1.1
32emb|AL031711.30|HS333E1 Human DNA sequence from clone LA16-333E1... 42 1.1
33gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 4.5
34gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
35gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, com... 40 4.5
36gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence 40 4.5
37emb|CR719692.2|CNS0GI9E Tetraodon nigroviridis full-length cDNA 40 4.5
38emb|CR714995.2|CNS0GEN3 Tetraodon nigroviridis full-length cDNA 40 4.5
39emb|CR705981.2|CNS0G7OP Tetraodon nigroviridis full-length cDNA 40 4.5
40emb|AL390716.27| Human DNA sequence from clone RP11-314P12 on ch... 40 4.5
41gb|AC183622.3| Pan troglodytes BAC clone CH251-66G8 from chromos... 40 4.5
42gb|AC115285.2| Homo sapiens chromosome 1 clone RP4-580O19, compl... 40 4.5
43emb|BX569798.16| Zebrafish DNA sequence from clone DKEY-26I13 in... 40 4.5
44gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, c... 40 4.5
45gb|AC087463.5| Homo sapiens chromosome 15, clone RP11-682C24, co... 40 4.5
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
47gb|AC093777.4| Homo sapiens BAC clone RP11-166N24 from 4, comple... 40 4.5
48dbj|AB017563.2| Homo sapiens IGSF4 gene, complete cds 40 4.5
49gb|AC092159.4| Homo sapiens BAC clone RP11-455F15 from 2, comple... 40 4.5
50gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, com... 40 4.5
51gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, c... 40 4.5
52emb|BX571799.4| Zebrafish DNA sequence from clone DKEY-281A24, c... 40 4.5
53gb|AF066865.1|AF066865 Bacteriophage TPW22 holin, lysin, integra... 40 4.5
54gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, com... 40 4.5
55dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.5 
>ref|XM_478655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2655

 Score =  105 bits (53), Expect = 9e-20
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                        
Query: 199  ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 258
            ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 2486 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 2427

                                                                        
Query: 259  cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 318
            ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 2426 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 2367

                                 
Query: 319  acgatcgccttgcccgccgcc 339
            |||| |||||| |||||||||
Sbjct: 2366 acgaccgccttccccgccgcc 2346
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 9e-20
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 199      ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 258
                ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 21848233 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 21848292

                                                                            
Query: 259      cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 318
                ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 21848293 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 21848352

                                     
Query: 319      acgatcgccttgcccgccgcc 339
                |||| |||||| |||||||||
Sbjct: 21848353 acgaccgccttccccgccgcc 21848373



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 225      cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
                ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 21938000 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 21937956



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 225      cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
                ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 21919428 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 21919384



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                        
Query: 214      tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
                |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 21952643 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 21952698



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 246      cagcagcagcatccacacgttgaaaacaagcccg 279
                ||||||||| |||||||||||||| || ||||||
Sbjct: 21857000 cagcagcaggatccacacgttgaataccagcccg 21857033
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score =  105 bits (53), Expect = 9e-20
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                         
Query: 199   ggcctcttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatc 258
             ||||||||||||||   |||||| |||||||||||||||||||||||||||| ||| | |
Sbjct: 61909 ggcctcttgctccacctccccatgatcccgagcgcgaacgggtagagcagcaccaggacc 61968

                                                                         
Query: 259   cacacgttgaaaacaagcccgctcgccgcccccgcgacctgcgctgccgaccaccgccca 318
             ||||||||||| || |||||   || ||| || ||||||||||| | || ||||| ||| 
Sbjct: 61969 cacacgttgaacaccagccccgccgacgcgccggcgacctgcgccggcgtccaccccccg 62028

                                  
Query: 319   acgatcgccttgcccgccgcc 339
             |||| |||||| |||||||||
Sbjct: 62029 acgaccgccttccccgccgcc 62049



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 225    cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
              ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 133104 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 133060



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 246   cagcagcagcatccacacgttgaaaacaagcccg 279
             ||||||||| |||||||||||||| || ||||||
Sbjct: 70676 cagcagcaggatccacacgttgaataccagcccg 70709
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>ref|XM_478666.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2583

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2406 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2362
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>ref|XM_478664.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2930

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2557 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2513
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>gb|AF432503.1|AF432503 Oryza sativa cellulose synthase-like protein OsCslF2 gene, complete
            cds
          Length = 3468

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2843 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2799
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>gb|AF432502.1|AF432502 Oryza sativa cellulose synthase-like protein OsCslF1 gene, complete
            cds
          Length = 3454

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2850 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2806
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>gb|AF435651.1| Oryza sativa CSLF2 mRNA, partial cds
          Length = 1567

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1199 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 1155
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>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0013G11
          Length = 151405

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 225   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
             ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 30044 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 30000



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 225   cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
             ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 11472 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 11428



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 214   tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 44687 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 44742
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>dbj|AK100523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100P04, full
            insert sequence
          Length = 2929

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2556 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2512
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>dbj|AK066835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087I16, full
            insert sequence
          Length = 2430

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 225  cccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 2076 cccgagcgcgaacgggtagaggagcaccaggatccacacgttgaa 2032
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>ref|XM_478669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2694

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 214  tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
            |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 2534 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 2479
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>gb|AF432505.1|AF432505 Oryza sativa cellulose synthase-like protein OsCslF4 gene, complete cds
          Length = 13642

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 214   tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 13067 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 13012
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>gb|AF432504.1|AF432504 Oryza sativa cellulose synthase-like protein OsCslF3 gene, complete cds
          Length = 13642

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 214   tgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacacgttgaa 269
             |||||||| ||||| ||||||||||||||||| |||  ||| ||||||||||||||
Sbjct: 13067 tgccccatgatccccagcgcgaacgggtagaggagcgccaggatccacacgttgaa 13012
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>ref|NM_195879.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase
            D-like protein (OSJNBb0052C09.2), mRNA
          Length = 2493

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 204  cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 2403 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 2344

                  
Query: 264  gttgaa 269
            ||||||
Sbjct: 2343 gttgaa 2338
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>gb|AY022882.1| Oryza sativa microsatellite MRG5207 containing (CGG)X8, closest to
           marker C148, genomic sequence
          Length = 224

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 204 cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
           |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 204 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 145

                 
Query: 264 gttgaa 269
           ||||||
Sbjct: 144 gttgaa 139
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>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 204   cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
             |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 17944 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 18003

                   
Query: 264   gttgaa 269
             ||||||
Sbjct: 18004 gttgaa 18009
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>tpg|BK000091.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like F7 gene, complete
            cds
          Length = 11160

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 204  cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 8217 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 8158

                  
Query: 264  gttgaa 269
            ||||||
Sbjct: 8157 gttgaa 8152
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                           
Query: 204     cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
               |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 9665419 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 9665478

                     
Query: 264     gttgaa 269
               ||||||
Sbjct: 9665479 gttgaa 9665484
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>dbj|AK110467.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G08, full
            insert sequence
          Length = 2729

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 204  cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
            |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 2441 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 2382

                  
Query: 264  gttgaa 269
            ||||||
Sbjct: 2381 gttgaa 2376
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                           
Query: 204     cttgctccagtgccccattatcccgagcgcgaacgggtagagcagcagcagcatccacac 263
               |||||||| | | ||||| | |||||||||||||||||||||  ||| || || ||||||
Sbjct: 9671458 cttgctccggcgacccatcagcccgagcgcgaacgggtagagatgcaccaccacccacac 9671517

                     
Query: 264     gttgaa 269
               ||||||
Sbjct: 9671518 gttgaa 9671523
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>ref|XM_478656.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2985

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 246  cagcagcagcatccacacgttgaaaacaagcccg 279
            ||||||||| |||||||||||||| || ||||||
Sbjct: 2632 cagcagcaggatccacacgttgaataccagcccg 2599
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>dbj|AK067424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107C16, full
            insert sequence
          Length = 2986

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 246  cagcagcagcatccacacgttgaaaacaagcccg 279
            ||||||||| |||||||||||||| || ||||||
Sbjct: 2632 cagcagcaggatccacacgttgaataccagcccg 2599
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>emb|Z75955.1|CER07B7 Caenorhabditis elegans Cosmid R07B7, complete sequence
          Length = 43469

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3     tcatcaaggtaaactttattat 24
             ||||||||||||||||||||||
Sbjct: 39526 tcatcaaggtaaactttattat 39505
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>emb|BX059064.1|CNS09HQK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC39DA03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 975

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 226 ccgagcgcgaacgggtagagc 246
           |||||||||||||||||||||
Sbjct: 785 ccgagcgcgaacgggtagagc 805
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>emb|BX059063.1|CNS09HQJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC39DA03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 987

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 ccgagcgcgaacgggtagagc 246
           |||||||||||||||||||||
Sbjct: 154 ccgagcgcgaacgggtagagc 134
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>emb|BX043157.1|CNS095GP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC15CC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 990

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 226 ccgagcgcgaacgggtagagc 246
           |||||||||||||||||||||
Sbjct: 804 ccgagcgcgaacgggtagagc 824
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>emb|BX043156.1|CNS095GO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC15CC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 ccgagcgcgaacgggtagagc 246
           |||||||||||||||||||||
Sbjct: 162 ccgagcgcgaacgggtagagc 142
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>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8
          Length = 265786

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 267    gaaaacaagcccgctcgccgccccc 291
              |||||||||||||||||||| ||||
Sbjct: 245860 gaaaacaagcccgctcgccggcccc 245836
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>gb|AC120498.2| Homo sapiens chromosome 16 clone RP11-616M22, complete sequence
          Length = 195680

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 267    gaaaacaagcccgctcgccgccccc 291
              |||||||||||||||||||| ||||
Sbjct: 189159 gaaaacaagcccgctcgccggcccc 189135
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>ref|XM_311307.2| Anopheles gambiae str. PEST ENSANGP00000017454
           (ENSANGG00000014965), partial mRNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 226 ccgagcgcgaacgggtagagc 246
           |||||||||||||||||||||
Sbjct: 566 ccgagcgcgaacgggtagagc 546
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>emb|AL031711.30|HS333E1 Human DNA sequence from clone LA16-333E1 on chromosome 16, complete
             sequence
          Length = 39943

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 267   gaaaacaagcccgctcgccgccccc 291
             |||||||||||||||||||| ||||
Sbjct: 38778 gaaaacaagcccgctcgccggcccc 38754
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gttttgtttcacagctttta 61
              ||||||||||||||||||||
Sbjct: 833746 gttttgtttcacagctttta 833765
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   agcagcagcagcatccacac 263
             ||||||||||||||||||||
Sbjct: 48088 agcagcagcagcatccacac 48069
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>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence
          Length = 275200

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   agcagcagcagcatccacac 263
             ||||||||||||||||||||
Sbjct: 20343 agcagcagcagcatccacac 20324
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>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence
          Length = 191669

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   agcagcagcagcatccacac 263
             ||||||||||||||||||||
Sbjct: 75325 agcagcagcagcatccacac 75344
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>emb|CR719692.2|CNS0GI9E Tetraodon nigroviridis full-length cDNA
          Length = 1055

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   gctgcaattaaagctgtttt 46
            ||||||||||||||||||||
Sbjct: 1027 gctgcaattaaagctgtttt 1046
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>emb|CR714995.2|CNS0GEN3 Tetraodon nigroviridis full-length cDNA
          Length = 807

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  gctgcaattaaagctgtttt 46
           ||||||||||||||||||||
Sbjct: 779 gctgcaattaaagctgtttt 798
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>emb|CR705981.2|CNS0G7OP Tetraodon nigroviridis full-length cDNA
          Length = 807

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  gctgcaattaaagctgtttt 46
           ||||||||||||||||||||
Sbjct: 779 gctgcaattaaagctgtttt 798
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>emb|AL390716.27| Human DNA sequence from clone RP11-314P12 on chromosome 10 Contains the
             PPYR1 gene for Pancreatic polypeptide receptor 1, a novel
             gene, part of a novel gene  and a heterogeneous nuclear
             ribonucleoprotein A1 (HNRPA1) pseudogene, complete
             sequence
          Length = 75031

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caattaaagctgttttgttt 50
             ||||||||||||||||||||
Sbjct: 11071 caattaaagctgttttgttt 11090
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>gb|AC183622.3| Pan troglodytes BAC clone CH251-66G8 from chromosome 15, complete
              sequence
          Length = 206618

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     acttgacaaaaattaaacta 97
              ||||||||||||||||||||
Sbjct: 118754 acttgacaaaaattaaacta 118735



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    acttgacaaaaattaaacta 97
             ||||||||||||||||||||
Sbjct: 30946 acttgacaaaaattaaacta 30927
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>gb|AC115285.2| Homo sapiens chromosome 1 clone RP4-580O19, complete sequence
          Length = 124786

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    attaaagctgttttgtttca 52
             ||||||||||||||||||||
Sbjct: 20220 attaaagctgttttgtttca 20239
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>emb|BX569798.16| Zebrafish DNA sequence from clone DKEY-26I13 in linkage group 1, complete
              sequence
          Length = 215607

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     aaaaattaaactagttttat 104
              ||||||||||||||||||||
Sbjct: 140297 aaaaattaaactagttttat 140278
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>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence
          Length = 110907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    acaaaaattaaactagtttt 102
             ||||||||||||||||||||
Sbjct: 54180 acaaaaattaaactagtttt 54199
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>gb|AC087463.5| Homo sapiens chromosome 15, clone RP11-682C24, complete sequence
          Length = 196918

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     acttgacaaaaattaaacta 97
              ||||||||||||||||||||
Sbjct: 122534 acttgacaaaaattaaacta 122515
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 244     agcagcagcagcatccacac 263
               ||||||||||||||||||||
Sbjct: 1386426 agcagcagcagcatccacac 1386407
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>gb|AC093777.4| Homo sapiens BAC clone RP11-166N24 from 4, complete sequence
          Length = 116938

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   attacttgacaaaaattaaa 94
            ||||||||||||||||||||
Sbjct: 5718 attacttgacaaaaattaaa 5737
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>dbj|AB017563.2| Homo sapiens IGSF4 gene, complete cds
          Length = 12595

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ctgttttgtttcacagcttt 59
            ||||||||||||||||||||
Sbjct: 2927 ctgttttgtttcacagcttt 2946
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>gb|AC092159.4| Homo sapiens BAC clone RP11-455F15 from 2, complete sequence
          Length = 82115

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caattaaagctgttttgttt 50
             ||||||||||||||||||||
Sbjct: 37437 caattaaagctgttttgttt 37456
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>gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, complete sequence
          Length = 195033

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    acttgacaaaaattaaacta 97
             ||||||||||||||||||||
Sbjct: 75871 acttgacaaaaattaaacta 75852
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>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     acaaaaattaaactagtttt 102
              ||||||||||||||||||||
Sbjct: 155172 acaaaaattaaactagtttt 155191
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>emb|BX571799.4| Zebrafish DNA sequence from clone DKEY-281A24, complete sequence
          Length = 159106

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     gctgcaattaaagctgtttt 46
              ||||||||||||||||||||
Sbjct: 134383 gctgcaattaaagctgtttt 134364
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>gb|AF066865.1|AF066865 Bacteriophage TPW22 holin, lysin, integrase (int), and repressor
            protein (rap) genes, complete cds; attP site; and unknown
            genes
          Length = 8219

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   taaactttattatatgctgc 31
            ||||||||||||||||||||
Sbjct: 4029 taaactttattatatgctgc 4048
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>gb|AC115907.7| Mus musculus chromosome 3, clone RP24-476B18, complete sequence
          Length = 165131

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    agcagcagcagcatccacac 263
              ||||||||||||||||||||
Sbjct: 112814 agcagcagcagcatccacac 112833
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>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete
             sequences
          Length = 57000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctgttttgtttcacagcttt 59
             ||||||||||||||||||||
Sbjct: 13864 ctgttttgtttcacagcttt 13845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,527,362
Number of Sequences: 3902068
Number of extensions: 3527362
Number of successful extensions: 87734
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87508
Number of HSP's gapped (non-prelim): 226
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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