>gb|AC092965.4| Homo sapiens 3 BAC RP11-440K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187033

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 294    catcaacctatcagaaaaaattt 316
              |||||||||||||||||||||||
Sbjct: 144317 catcaacctatcagaaaaaattt 144295

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     cacactagtactagcaagaaa 156
               |||||||||||||||||||||
Sbjct: 3208930 cacactagtactagcaagaaa 3208950



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 264      ctcctcctcctcgaccatct 283
                ||||||||||||||||||||
Sbjct: 19669480 ctcctcctcctcgaccatct 19669499

>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    atttaatcaacttctctcttg 60
             |||||||||||||||||||||
Sbjct: 21711 atttaatcaacttctctcttg 21691

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     cacactagtactagcaagaaa 156
               |||||||||||||||||||||
Sbjct: 3208875 cacactagtactagcaagaaa 3208895



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 264      ctcctcctcctcgaccatct 283
                ||||||||||||||||||||
Sbjct: 19595694 ctcctcctcctcgaccatct 19595713

>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 90756

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 136  cacactagtactagcaagaaa 156
            |||||||||||||||||||||
Sbjct: 8734 cacactagtactagcaagaaa 8714

>dbj|AP004529.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01K12, TM0058a,
             complete sequence
          Length = 78249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   acccaacaagcacctcctcct 271
             |||||||||||||||||||||
Sbjct: 36026 acccaacaagcacctcctcct 36006

>gb|AC166056.2| Mus musculus BAC clone RP23-462A15 from chromosome 13, complete sequence
          Length = 198814

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 113    acaaatttatacactcacagagacacac 140
              |||||| ||||||| |||||||||||||
Sbjct: 116384 acaaatatatacacacacagagacacac 116357

>gb|AC154375.2| Mus musculus BAC clone RP23-69H21 from chromosome 12, complete sequence
          Length = 169125

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atacactcacagagacacac 140
              ||||||||||||||||||||
Sbjct: 112987 atacactcacagagacacac 113006

>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence
          Length = 226254

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   atacactcacagagacacac 140
             ||||||||||||||||||||
Sbjct: 84681 atacactcacagagacacac 84662

>gb|BC068798.1| Xenopus laevis hypothetical protein MGC81371, mRNA (cDNA clone
            MGC:81371 IMAGE:6634340), complete cds
          Length = 3623

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  gcacctcctcctcctcgacc 279
            ||||||||||||||||||||
Sbjct: 2623 gcacctcctcctcctcgacc 2604

>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence
          Length = 184079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atacactcacagagacacac 140
              ||||||||||||||||||||
Sbjct: 130434 atacactcacagagacacac 130453

>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence
          Length = 203321

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atacactcacagagacacac 140
              ||||||||||||||||||||
Sbjct: 191815 atacactcacagagacacac 191796

>gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3p, complete sequence
          Length = 185895

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     attcactgtcacatttaatc 47
              ||||||||||||||||||||
Sbjct: 180236 attcactgtcacatttaatc 180217

>emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on chromosome 1 Contains the
             5' end of the COPA gene for coatomer protein complex
             subunit alpha, the gene for nicastrin (KIAA0253), the
             NHLH1 gene for nescient helix loop helix 1, the VANGL2
             gene for vang-like 2 (van gogh, Drosophila) and a CpG
             island, complete sequence
          Length = 102345

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   cacccaacaagcacctcctc 269
             ||||||||||||||||||||
Sbjct: 82239 cacccaacaagcacctcctc 82220

>ref|XM_782466.1| PREDICTED: Strongylocentrotus purpuratus similar to HLA-B
           associated transcript 2 (LOC582519), partial mRNA
          Length = 1763

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 caagcacctcctcctcctcg 276
           ||||||||||||||||||||
Sbjct: 489 caagcacctcctcctcctcg 508

>emb|X88851.1|SCESTGENE S.cerevisiae DNA for hypotetical proteins and esterase genes
          Length = 39594

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aagttagttcaaacaacaac 99
             ||||||||||||||||||||
Sbjct: 16919 aagttagttcaaacaacaac 16900

>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete
              sequence
          Length = 215657

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    atacactcacagagacacac 140
              ||||||||||||||||||||
Sbjct: 202478 atacactcacagagacacac 202459

>emb|BX530064.8| Zebrafish DNA sequence from clone CH211-232M19 in linkage group 16,
             complete sequence
          Length = 153572

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    caactattcactgtcacatt 42
             ||||||||||||||||||||
Sbjct: 97714 caactattcactgtcacatt 97733

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 130      cagagacacactagtactag 149
                ||||||||||||||||||||
Sbjct: 14735265 cagagacacactagtactag 14735246

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 309      aaaaatttatctagaacaagaaga 332
                ||||||||||||||||| ||||||
Sbjct: 14617867 aaaaatttatctagaactagaaga 14617890

>gb|AY078399.1| Apis mellifera major royal jelly protein MRJP2 (MRJP2) gene, 5'
           flanking region and partial cds
          Length = 969

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 aaaatttatctagaacaaga 329
           ||||||||||||||||||||
Sbjct: 595 aaaatttatctagaacaaga 614

>gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, complete sequence
          Length = 164879

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    actgactgtcatcataagtt 84
             ||||||||||||||||||||
Sbjct: 61054 actgactgtcatcataagtt 61035

>gb|AC027045.21| Homo sapiens chromosome 17, clone RP11-477N12, complete sequence
          Length = 188646

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    atacactcacagagacacac 140
              ||||||||||||||||||||
Sbjct: 103384 atacactcacagagacacac 103403

>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 309   aaaaatttatctagaacaagaaga 332
             ||||||||||||||||| ||||||
Sbjct: 99244 aaaaatttatctagaactagaaga 99267

>dbj|AP004804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0680B05
          Length = 138741

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    cagagacacactagtactag 149
              ||||||||||||||||||||
Sbjct: 121132 cagagacacactagtactag 121113

>dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0640D01
          Length = 164996

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   cagagacacactagtactag 149
             ||||||||||||||||||||
Sbjct: 46349 cagagacacactagtactag 46330

>dbj|AK109778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B10, full
           insert sequence
          Length = 1432

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 cagagacacactagtactag 149
           ||||||||||||||||||||
Sbjct: 288 cagagacacactagtactag 269

>emb|Z49351.1|SCYJL076W S.cerevisiae chromosome X reading frame ORF YJL076w
          Length = 4095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aagttagttcaaacaacaac 99
            ||||||||||||||||||||
Sbjct: 1895 aagttagttcaaacaacaac 1914

>gb|AC079134.24| Mus musculus chromosome 1, clone RP23-395H12, complete sequence
          Length = 204915

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tatacactcacagagacaca 139
              ||||||||||||||||||||
Sbjct: 134669 tatacactcacagagacaca 134650

>gb|BC090159.1| Xenopus laevis cDNA clone MGC:99228 IMAGE:7209403, complete cds
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  taccatcatcaacctatcag 307
            ||||||||||||||||||||
Sbjct: 2234 taccatcatcaacctatcag 2215

>gb|DQ331818.1| Synthetic construct Saccharomyces cerevisiae clone FLH202864.01X NET1
            gene, complete sequence
          Length = 3570

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   aagttagttcaaacaacaac 99
            ||||||||||||||||||||
Sbjct: 1712 aagttagttcaaacaacaac 1731

>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133659

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ctcctcctcctcgaccatct 283
             ||||||||||||||||||||
Sbjct: 57513 ctcctcctcctcgaccatct 57494

>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence
          Length = 176888

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atacactcacagagacacac 140
             ||||||||||||||||||||
Sbjct: 95232 atacactcacagagacacac 95251

>emb|AL953890.7| Mouse DNA sequence from clone RP23-321B3 on chromosome 2, complete
             sequence
          Length = 157722

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gggtgcactctttcaactat 29
             ||||||||||||||||||||
Sbjct: 92101 gggtgcactctttcaactat 92120

>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete
             sequence
          Length = 180189

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atacactcacagagacacac 140
             ||||||||||||||||||||
Sbjct: 63567 atacactcacagagacacac 63586

>emb|AL589652.13| Mouse DNA sequence from clone RP23-369L6 on chromosome X, complete
             sequence
          Length = 199294

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   atacactcacagagacacac 140
             ||||||||||||||||||||
Sbjct: 98935 atacactcacagagacacac 98954


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,791,198
Number of Sequences: 3902068
Number of extensions: 4791198
Number of successful extensions: 106372
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106021
Number of HSP's gapped (non-prelim): 351
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)