ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2302_MYCBO (P65713) Putative phosphate permease Mb2302 28 4.5
2Y2281_MYCTU (P65712) Putative phosphate permease Rv2281/MT2339 28 4.5
3CN039_MOUSE (Q9CTN5) Protein C14orf39 homolog 28 4.5

>Y2302_MYCBO (P65713) Putative phosphate permease Mb2302|
          Length = 552

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -2

Query: 288 IVEMVLFK-----HLGFVICNGLHLIVLVGAGLIWLA 193
           IV M+LFK     HLG    N   +I +VGA  +W+A
Sbjct: 337 IVAMLLFKGFKHMHLGLTTMNNYFIIAMVGAA-VWMA 372



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>Y2281_MYCTU (P65712) Putative phosphate permease Rv2281/MT2339|
          Length = 552

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -2

Query: 288 IVEMVLFK-----HLGFVICNGLHLIVLVGAGLIWLA 193
           IV M+LFK     HLG    N   +I +VGA  +W+A
Sbjct: 337 IVAMLLFKGFKHMHLGLTTMNNYFIIAMVGAA-VWMA 372



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>CN039_MOUSE (Q9CTN5) Protein C14orf39 homolog|
          Length = 574

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 99  YFATLSELHLEYAAT---IKYASEIKEHEAILTALLTISAQLQL 221
           Y   L +  L+Y+ T    KY  + KEHE I   +L  + QLQL
Sbjct: 118 YEDVLKQYQLKYSETRFSCKYYEKKKEHEEIKNRVLACTEQLQL 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,442,868
Number of Sequences: 219361
Number of extensions: 640711
Number of successful extensions: 1432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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