Clone Information

BLAST Search Result

Clone Name	rbastl15f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NPD_BORPE (Q7VX46) NAD-dependent deacetylase (EC 3.5.1.-) (Regul...	31	0.68
2	NPD_BORBR (Q7WLE5) NAD-dependent deacetylase (EC 3.5.1.-) (Regul...	31	0.68
3	CP1A1_CAVPO (Q06367) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)	31	0.89
4	VMSA_HBVYW (P03138) Major surface antigen precursor	30	1.2
5	VMSA_HBVIA (P24025) Major surface antigen precursor	30	1.2
6	VMSA_HBVAY (P03139) Major surface antigen precursor	30	1.2
7	ATP4B_RABIT (P18597) Potassium-transporting ATPase beta chain (P...	30	2.0
8	VMSA_HBVIL (P12911) Major surface antigen precursor	30	2.0
9	ATP4B_RAT (P18598) Potassium-transporting ATPase beta chain (Pro...	30	2.0
10	VMSA_HBVDN (P30019) Major surface antigen	29	2.6
11	VMSA_HBVAD (P31868) Major surface antigen	29	2.6
12	ATP4B_PIG (P18434) Potassium-transporting ATPase beta chain (Pro...	29	2.6
13	CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)	29	2.6
14	ATP4B_MOUSE (P50992) Potassium-transporting ATPase beta chain (P...	29	2.6
15	VMSA_HBVDR (P03140) Major surface antigen precursor	29	2.6
16	VMSA_HBVA4 (Q05496) Major surface antigen precursor	29	2.6
17	VMSA_HBVAR (P31869) Major surface antigen	29	3.4
18	TBC10_HUMAN (Q9BXI6) TBC1 domain family member 10A (EBP50-PDX in...	29	3.4
19	PYRG_VIBVY (Q7MHQ0) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	29	3.4
20	PYRG_VIBVU (Q8DC63) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	29	3.4
21	ATP4B_HUMAN (P51164) Potassium-transporting ATPase beta chain (P...	29	3.4
22	PYRG_VIBPA (Q87LP9) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	29	3.4
23	KUP_ERWCT (Q6DB92) Low affinity potassium transport system prote...	29	3.4
24	PYRG_VIBCH (Q9KPC4) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	29	3.4
25	VLLY_VIBVU (O06695) Hemolysin vllY	29	3.4
26	PYRG_YERPE (Q8ZBN1) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	28	4.4
27	ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1	28	5.8
28	VMSA_HPBGS (P03144) Major surface antigen precursor	28	5.8
29	VMSA_HBVWO (P17399) Major surface antigen precursor	28	5.8
30	VMSA_HBVWJ (P17398) Major surface antigen precursor	28	5.8
31	VMSA_HBVWI (P17397) Major surface antigen precursor	28	5.8
32	VMSA_HBVAW (P03142) Major surface antigen precursor	28	5.8
33	ATP4B_CANFA (P33704) Potassium-transporting ATPase beta chain (P...	28	5.8
34	VMSA_HBVWP (Q02317) Major surface antigen precursor	28	5.8
35	VMSA_HBVW9 (P17101) Major surface antigen precursor	28	5.8
36	VMSA_HBVW2 (P03141) Major surface antigen precursor	28	5.8
37	DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)	28	7.5
38	PYRG_HAEIN (P44341) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	28	7.5
39	VMSA_WHVW6 (P11293) Major surface antigen precursor	28	7.5
40	VMSA_HBV (P31873) Major surface antigen	28	7.5
41	VMSA_WHV8 (P17400) Major surface antigen precursor	28	7.5
42	VMSA_WHV7 (P12909) Major surface antigen precursor	28	7.5
43	VMSA_WHV59 (P12910) Major surface antigen precursor	28	7.5
44	SPTA3_HUMAN (Q8NHX4) Spermatogenesis-associated protein 3 (Testi...	28	7.5
45	VMSA_WHV1 (P03143) Major surface antigen precursor	28	7.5
46	STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (F...	28	7.5
47	PYRG_PASMU (Q9CJW9) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...	28	7.5
48	PSRA_WOLSU (P31075) Polysulfide reductase chain A precursor (Sul...	27	9.8
49	ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)	27	9.8
50	Y096_NPVOP (Q83951) Hypothetical 19.4 kDa protein (ORF97) (ORF 96)	27	9.8

>NPD_BORPE (Q7VX46) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 274

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 266 PRGPGQ*TLEISGRQWSSCGNGVAP 192
           PRGP Q TLE++  QW++   G AP
Sbjct: 138 PRGPWQHTLELANPQWAALQAGAAP 162

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>NPD_BORBR (Q7WLE5) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 274

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 266 PRGPGQ*TLEISGRQWSSCGNGVAP 192
           PRGP Q TLE++  QW++   G AP
Sbjct: 138 PRGPWQHTLELANPQWAALQAGAAP 162

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>CP1A1_CAVPO (Q06367) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 516

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -1

Query: 155 GFYASMSCCIHVAKW----DQRLSGSKIV*SGELFGSPE 51
           GFY    CCI V +W    DQ+L G   V   E F SP+
Sbjct: 394 GFYIPKGCCIFVNQWQINHDQKLWGDPSVFRPERFLSPD 432

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>VMSA_HBVYW (P03138) Major surface antigen precursor|
          Length = 388

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA  +FLWEW+SA + +L L+
Sbjct: 305 SDGNCTCIPIPSSWAFGKFLWEWASARFSWLSLL 338

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>VMSA_HBVIA (P24025) Major surface antigen precursor|
          Length = 388

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA  +FLWEW+SA + +L L+
Sbjct: 305 SDGNCTCIPIPSSWAFGKFLWEWASARFSWLSLL 338

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>VMSA_HBVAY (P03139) Major surface antigen precursor|
          Length = 388

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA  +FLWEW+SA + +L L+
Sbjct: 305 SDGNCTCIPIPSSWAFGKFLWEWASARFSWLSLL 338

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>ATP4B_RABIT (P18597) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit)
          Length = 291

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y+  ++V    + LCI+VL+
Sbjct: 22  WNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGLFALCIYVLM 63

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>VMSA_HBVIL (P12911) Major surface antigen precursor|
          Length = 388

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA  +FLWEW+S  + +L L+
Sbjct: 305 SDGNCTCIPIPSSWAFAKFLWEWASVRFSWLSLL 338

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>ATP4B_RAT (P18598) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit)
          Length = 294

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y   ++V    + LCI+VL+
Sbjct: 22  WNPDTGQMLGRTPARWVWISLYYAAFYVVMTGLFALCIYVLM 63

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>VMSA_HBVDN (P30019) Major surface antigen|
          Length = 226

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA   FLWEW+S  + +L L+
Sbjct: 143 SDGNCTCIPIPSSWAFARFLWEWASVRFSWLSLL 176

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>VMSA_HBVAD (P31868) Major surface antigen|
          Length = 226

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA   FLWEW+S  + +L L+
Sbjct: 143 SDGNCTCIPIPSSWAFANFLWEWASVRFSWLSLL 176

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>ATP4B_PIG (P18434) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit) (gp60-90)
          Length = 290

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y+  ++V    + LCI+VL+
Sbjct: 22  WNPDTGQMLGRTLSRWVWISLYYVAFYVVMSGIFALCIYVLM 63

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>CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)|
          Length = 911

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = -3

Query: 294 AALLIIKGLSKGS----WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLLH 127
           AA LI +GL   S    WT+ +G +  ++ F  +W+++T  YL  V +P W++   +L H
Sbjct: 178 AATLICRGLDYFSSLWIWTLVVG-YVLTVSF--KWNASTERYLRAVSIPVWII---LLFH 231

Query: 126 PCREVGS 106
                GS
Sbjct: 232 LASLAGS 238

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>ATP4B_MOUSE (P50992) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit)
          Length = 294

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y   ++V    + LCI+VL+
Sbjct: 22  WNPDTGQMLGRTPARWVWISLYYAGFYVVMTGLFALCIYVLM 63

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>VMSA_HBVDR (P03140) Major surface antigen precursor|
          Length = 399

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA   FLWEW+S  + +L L+
Sbjct: 316 SDGNCTCIPIPSSWAFARFLWEWASVRFSWLSLL 349

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>VMSA_HBVA4 (Q05496) Major surface antigen precursor|
          Length = 399

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 267 SKGSWT-VDLGDFWASMEFLWEWSSATYLYLFLV 169
           S G+ T + +   WA  ++LWEW+SA + +L L+
Sbjct: 316 SDGNCTCIPIPSSWALGKYLWEWASARFSWLSLL 349

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>VMSA_HBVAR (P31869) Major surface antigen|
          Length = 226

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA   FLWEW+S  + +L L+
Sbjct: 156 WAFARFLWEWASVRFSWLSLL 176

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>TBC10_HUMAN (Q9BXI6) TBC1 domain family member 10A (EBP50-PDX interactor of 64|
           kDa) (EPI64 protein)
          Length = 508

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
 Frame = +2

Query: 146 HKSQQGRWTRNR----YRYVALLHSHKNSIDAQKSPRSTVQD------PLDSPFIINNAA 295
           H  Q  RW   R     R    LH  K  +DA+  PR  +Q       PLD+P   + A 
Sbjct: 365 HLIQLRRWQETRGELQCRSPPRLHGAKAILDAEPGPRPALQPSPSIRLPLDAPLPGSKAK 424

Query: 296 GGKPKMAR 319
              PK A+
Sbjct: 425 PKPPKQAQ 432

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>PYRG_VIBVY (Q7MHQ0) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 545

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + EDG ETD D   Y    RT +T RN
Sbjct: 52  MSPTQHGEVFVT-EDGAETDLDLGHYERFIRTKMTKRN 88

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>PYRG_VIBVU (Q8DC63) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 545

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + EDG ETD D   Y    RT +T RN
Sbjct: 52  MSPTQHGEVFVT-EDGAETDLDLGHYERFIRTKMTKRN 88

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>ATP4B_HUMAN (P51164) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit)
          Length = 291

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y+  ++V    + LC++VL+
Sbjct: 22  WNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGLFALCLYVLM 63

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>PYRG_VIBPA (Q87LP9) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 546

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + EDG ETD D   Y    RT +T RN
Sbjct: 52  MSPTQHGEVFVT-EDGAETDLDLGHYERFIRTKMTKRN 88

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>KUP_ERWCT (Q6DB92) Low affinity potassium transport system protein kup (Kup|
           system potassium uptake protein)
          Length = 622

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
 Frame = +2

Query: 167 WTRNRYRYVALLHSHKNSIDA-----QKSPRSTV 253
           W   R+R +  LH H NS+DA     +KSP + V
Sbjct: 440 WKSERFRLLRRLHEHGNSLDAMIASLEKSPPTRV 473

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>PYRG_VIBCH (Q9KPC4) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 544

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + EDG ETD D   Y    RT +T RN
Sbjct: 51  MSPTQHGEVFVT-EDGAETDLDLGHYERFIRTKMTKRN 87

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>VLLY_VIBVU (O06695) Hemolysin vllY|
          Length = 357

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 44  YTVLDYQTIRQIKQSYSRLTFDPTSRHGCSKTWMHK 151
           YT  D   I Q+K  +S L F   ++H   + W+++
Sbjct: 18  YTAADNTGIEQLKHLFSSLGFAEVAKHRSKEAWLYR 53

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>PYRG_YERPE (Q8ZBN1) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 544

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + EDG ETD D   Y    RT +T RN
Sbjct: 51  MSPTQHGEVFVT-EDGAETDLDLGHYERFIRTKMTRRN 87

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>ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1|
          Length = 4167

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 92   SRLTFDPTSRHGCSKTWMHKSQQGRWTRNRYRYVALLHSHKNSIDAQKS 238
            S  T D +      K W  + QQ    + + R+ +L  SHKN+ + +KS
Sbjct: 3646 SESTHDDSRGERSVKEWSGRQQQRNKLQKKKRFKSLEKSHKNTGELKKS 3694

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>VMSA_HPBGS (P03144) Major surface antigen precursor|
          Length = 428

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFL----------VHLPCWLLCIHVL 133
           WA   +LWEW+ A + +L L          + L  WLL I ++
Sbjct: 358 WALGSYLWEWALARFSWLSLLVPLLQWLGGISLTVWLLLIWMI 400

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>VMSA_HBVWO (P17399) Major surface antigen precursor|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 318 WAFAKYLWEWASVRFSWLSLL 338

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>VMSA_HBVWJ (P17398) Major surface antigen precursor|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 318 WAFAKYLWEWASVRFSWLSLL 338

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>VMSA_HBVWI (P17397) Major surface antigen precursor|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 318 WAFAKYLWEWASVRFSWLSLL 338

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>VMSA_HBVAW (P03142) Major surface antigen precursor|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 318 WAFAKYLWEWASVRFSWLSLL 338

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>ATP4B_CANFA (P33704) Potassium-transporting ATPase beta chain (Proton pump beta|
           chain) (Gastric H+/K+ ATPase beta subunit)
          Length = 290

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 255 WTVDLGDFWASMEFLWEWSSATYLYLFLVHLPCWLLCIHVLL 130
           W  D G         W W S  Y+  ++V    + LCI+ L+
Sbjct: 22  WNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGIFALCIYTLM 63

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>VMSA_HBVWP (Q02317) Major surface antigen precursor|
          Length = 399

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 329 WAFAKYLWEWASVRFSWLSLL 349

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>VMSA_HBVW9 (P17101) Major surface antigen precursor|
          Length = 399

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 329 WAFAKYLWEWASVRFSWLSLL 349

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>VMSA_HBVW2 (P03141) Major surface antigen precursor|
          Length = 399

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW+S  + +L L+
Sbjct: 329 WAFAKYLWEWASVRFSWLSLL 349

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>DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)|
          Length = 623

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
 Frame = +2

Query: 50  VLDYQTIRQIKQSYSRLT------FDPTSRHGCSKTWMHKSQQGRWT 172
           V+D QT+ Q +Q    +       F+P+S  G    W  ++  G WT
Sbjct: 72  VIDLQTMHQYRQDTGTIRPVRRNFFEPSSAPGKGIVWEWENDAGSWT 118

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>PYRG_HAEIN (P44341) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 545

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + +DG ETD D   Y    RT +T RN
Sbjct: 52  MSPTQHGEVFVT-QDGAETDLDLGHYERFIRTKMTKRN 88

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>VMSA_WHVW6 (P11293) Major surface antigen precursor|
          Length = 282

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYL-FLVHLPCWL 151
           WA   +LWEW+ A + +L  LV L  WL
Sbjct: 212 WALGNYLWEWALARFSWLNLLVPLLQWL 239

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>VMSA_HBV (P31873) Major surface antigen|
          Length = 226

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYLFLV 169
           WA  ++LWEW S  + +L L+
Sbjct: 156 WAFAKYLWEWGSVRFSWLSLL 176

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>VMSA_WHV8 (P17400) Major surface antigen precursor|
          Length = 431

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYL-FLVHLPCWL 151
           WA   +LWEW+ A + +L  LV L  WL
Sbjct: 361 WALGNYLWEWALARFSWLNLLVPLLQWL 388

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>VMSA_WHV7 (P12909) Major surface antigen precursor|
          Length = 431

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYL-FLVHLPCWL 151
           WA   +LWEW+ A + +L  LV L  WL
Sbjct: 361 WALGNYLWEWALARFSWLNLLVPLLQWL 388

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>VMSA_WHV59 (P12910) Major surface antigen precursor|
          Length = 431

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYL-FLVHLPCWL 151
           WA   +LWEW+ A + +L  LV L  WL
Sbjct: 361 WALGNYLWEWALARFSWLNLLVPLLQWL 388

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>SPTA3_HUMAN (Q8NHX4) Spermatogenesis-associated protein 3 (Testis spermatocyte|
           apoptosis-related protein 1) (Testis and spermatogenesis
           cell-related protein 1)
          Length = 183

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 143 MHKSQQGRWTRNRYRYVALLHSHKNSIDAQKSPRSTVQDP 262
           M K ++ R    R+R     H+  NS   Q SP ST Q P
Sbjct: 1   MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQP 40

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>VMSA_WHV1 (P03143) Major surface antigen precursor|
          Length = 426

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 231 WASMEFLWEWSSATYLYL-FLVHLPCWL 151
           WA   +LWEW+ A + +L  LV L  WL
Sbjct: 356 WALGNYLWEWALARFSWLNLLVPLLQWL 383

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>STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)|
          Length = 138

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 149 KSQQGRWTRNRYRYVALLHSHKNSIDAQKSPRSTVQDPLDSP 274
           +SQ+G W++N  +  A   SH N   A  S     Q P DSP
Sbjct: 44  QSQRGSWSQNSSQSPA---SHHNPTGAHSSSGHQSQSPNDSP 82

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>PYRG_PASMU (Q9CJW9) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 542

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 MDAARHGCIKASREDGQETDTDTWRYSIPTRTPLTPRN 236
           M   +HG +  + +DG ETD D   Y    RT +T RN
Sbjct: 52  MSPTQHGEVFVT-QDGAETDLDLGHYERFIRTKMTKRN 88

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>PSRA_WOLSU (P31075) Polysulfide reductase chain A precursor (Sulfur reductase|
           chain A)
          Length = 763

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = +2

Query: 74  QIKQSYSRLTFDPTSRHGCSKTWMHKSQQGRWTRNRYRYVALLHSHKNSIDAQKSPRSTV 253
           +IKQ +   T   T+R G +KTW H   Q   + N + + +      N         S  
Sbjct: 135 EIKQKHGAHTVAFTARSGWNKTWFHHLAQAYGSPNIFGHESTCPLAYNMAGRDVFGGSMN 194

Query: 254 QDPLDSPFIIN 286
           +D   + +IIN
Sbjct: 195 RDFAKAKYIIN 205

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>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 156 SREDGQETDTDTWRYSIPTRTPLTPR 233
           + E G +T TD W  S P R P+T R
Sbjct: 102 ANERGHQTHTDFWGPSRPPRLPMTRR 127

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>Y096_NPVOP (Q83951) Hypothetical 19.4 kDa protein (ORF97) (ORF 96)|
          Length = 172

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 31  LTPLLHCSGLPNNSPDQTILL 93
           LT + H  GL NNSPD T++L
Sbjct: 124 LTLIEHFVGLKNNSPDHTLVL 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,438,652
Number of Sequences: 219361
Number of extensions: 1113055
Number of successful extensions: 3108
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3106
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result