Clone Name | rbastl15f04 |
---|---|
Clone Library Name | barley_pub |
>SYA_PROMP (Q7V3N0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 886 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 193 NHLSRIRA*ANHSRTDLLKSRTVLTSNDSAAER 291 N L+R +A ANH+ T LL+S + N+S ++ Sbjct: 553 NDLARAKAAANHTATHLLQSALKVVVNESVGQK 585
>PRPC2_CORGL (Q8NSL1) 2-methylcitrate synthase 2 (EC 2.3.3.5) (Methylcitrate| synthase 2) (Citrate synthase 2) Length = 383 Score = 28.1 bits (61), Expect = 5.7 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 164 AWLNNKIDHQTT*VGFGH 217 AW+NN +D++ +GFGH Sbjct: 252 AWINNALDNKNVVMGFGH 269
>CCPR2_GIBZE (Q4HWQ2) Putative heme-binding peroxidase (EC 1.11.1.-)| Length = 331 Score = 27.7 bits (60), Expect = 7.4 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = -2 Query: 289 VQRPNRYLSVPYEILISQSWNDSLMPES 206 V P R+ + + +L+S++W + +PES Sbjct: 191 VNNPTRFSNQYFRLLLSETWTEKTIPES 218
>NIR_ARATH (Q39161) Ferredoxin--nitrite reductase, chloroplast precursor (EC| 1.7.7.1) (NiR) Length = 586 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +1 Query: 85 NQFLTYNSQNSS*LMDNKTLPRKTNHCMVKQQD 183 +QF+T NSQ + D LPRK N C+V D Sbjct: 228 SQFITANSQGNP---DFTNLPRKWNVCVVGTHD 257
>CYSH_MYCTU (P65668) Probable phosphoadenosine phosphosulfate reductase (EC| 1.8.4.8) (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) Length = 254 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 227 IPGLTY*NLVRY*QVTIRPLNGEGYVVSGHQGW 325 + G T +++R+ T + G G VSGH+GW Sbjct: 24 LDGATATDMLRWTDETFGDIGGAGGGVSGHRGW 56
>CYSH_MYCBO (P65669) Probable phosphoadenosine phosphosulfate reductase (EC| 1.8.4.8) (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) Length = 254 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 227 IPGLTY*NLVRY*QVTIRPLNGEGYVVSGHQGW 325 + G T +++R+ T + G G VSGH+GW Sbjct: 24 LDGATATDMLRWTDETFGDIGGAGGGVSGHRGW 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,296,035 Number of Sequences: 219361 Number of extensions: 882589 Number of successful extensions: 1507 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1507 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)