>TTC5_MOUSE (Q99LG4) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = -2

Query: 252 MFWKGSVLTSSNI*FSGVPSH*RYRLFPQNPESLIELLILRKEESIFPQTLSSE---RYK 82
           ++WK   +TS++  FSG  +H + ++  QN   ++  L          QT S +   R+ 
Sbjct: 112 VYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQL----------QTDSGDEHSRHV 161

Query: 81  WRCVEEDHIV*KVSMLFGRKWVTIGN 4
              V +  +  ++ +L GR W  +GN
Sbjct: 162 MDSVRQAKLAVQMDVLDGRSWYILGN 187

>CP27A_RAT (P17178) Cytochrome P450 27, mitochondrial precursor (EC|
           1.14.13.15) (Cytochrome P-450C27/25) (Sterol
           26-hydroxylase) (Sterol 27-hydroxylase) (Vitamin D(3)
           25-hydroxylase)
           (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
           27-hydroxylase)
          Length = 533

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -2

Query: 177 LFPQNPESLIELLILRKEESIFPQTLSSERYKWRCVEED 61
           LFP+N + ++   ++ ++ S+FP+  S + ++W    ED
Sbjct: 420 LFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWLRKRED 458

>MYO1B_MOUSE (P46735) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MIH-L)|
          Length = 1107

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -2

Query: 282 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 121
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQR 703

Query: 120 SIFPQTLSSERYK-WRC 73
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720

>MYO1B_RAT (Q05096) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (Myosin|
           heavy chain myr 1)
          Length = 1136

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -2

Query: 282 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 121
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFQLEDLRKQR 703

Query: 120 SIFPQTLSSERYK-WRC 73
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720

>MYO1B_HUMAN (O43795) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MYH-1c)|
          Length = 1136

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -2

Query: 282 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 121
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLEDLRKQR 703

Query: 120 SIFPQTLSSERYK-WRC 73
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720

>TTC5_HUMAN (Q8N0Z6) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/83 (24%), Positives = 36/83 (43%)
 Frame = -2

Query: 252 MFWKGSVLTSSNI*FSGVPSH*RYRLFPQNPESLIELLILRKEESIFPQTLSSERYKWRC 73
           ++WK   + +++  FSG  +H R ++  QN   ++  L    E+      + S R     
Sbjct: 112 VYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLA 171

Query: 72  VEEDHIV*KVSMLFGRKWVTIGN 4
           V+ D       +  GR W  +GN
Sbjct: 172 VQMD-------VHDGRSWYILGN 187

>TTC5_RAT (Q5BK48) Tetratricopeptide repeat protein 5 (TPR repeat protein 5)|
          Length = 440

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -2

Query: 252 MFWKGSVLTSSNI*FSGVPSH*RYRLFPQNPESLIELLILRKEESIFPQTLSSE---RYK 82
           ++WK   + +++  FSG  +H + ++  QN   ++  L          QT S +   R+ 
Sbjct: 112 VYWKKGDVAAAHTCFSGALTHCKNKVSLQNLSMVLRQL----------QTDSGDEHSRHV 161

Query: 81  WRCVEEDHIV*KVSMLFGRKWVTIGN 4
              V +  +  ++ +L GR W  +GN
Sbjct: 162 MDSVRQAKLAVQMDVLDGRSWYILGN 187

>CP27A_MOUSE (Q9DBG1) Cytochrome P450 27, mitochondrial precursor (EC|
           1.14.13.15) (Cytochrome P-450C27/25) (Sterol
           26-hydroxylase) (Sterol 27-hydroxylase) (Vitamin D(3)
           25-hydroxylase)
           (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
           27-hydroxylase)
          Length = 533

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = -2

Query: 177 LFPQNPESLIELLILRKEESIFPQTLSSERYKW 79
           LFP+N + ++   ++ ++ S+FP+  S + ++W
Sbjct: 420 LFPKNTQFVLCHYVVSRDPSVFPEPNSFQPHRW 452


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,694,993
Number of Sequences: 219361
Number of extensions: 947400
Number of successful extensions: 1733
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)