Clone Name	rbastl15e08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in l...	40	0.50
2	ref|NM_207096.1| Danio rerio wingless-type MMTV integration site...	40	0.50
3	gb|BC066432.1| Danio rerio wingless-type MMTV integration site f...	40	0.50
4	gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, co...	38	2.0
5	gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, com...	38	2.0
6	gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosom...	38	2.0
7	gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, com...	38	2.0
8	ref|XM_949099.1| Theileria annulata strain Ankara calcium/calmod...	38	2.0
9	gb|AC110552.14| Mus musculus chromosome 17, clone RP23-247L7, co...	38	2.0
10	emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C2...	38	2.0
11	gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, comp...	38	2.0
12	gb|AC093861.3| Homo sapiens BAC clone RP11-542I3 from 4, complet...	38	2.0
13	tpg|BK001605.1| TPA: TPA_exp: Mus musculus neuropsin (Opn5) gene...	38	2.0
14	gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, com...	36	7.7
15	gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Canc...	36	7.7
16	ref|XM_633941.1| Dictyostelium discoideum WD-40 repeat-containin...	36	7.7
17	gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJN...	36	7.7
18	gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, com...	36	7.7
19	ref|NG_003469.1| Rattus norvegicus olfactory receptor pseudogene...	36	7.7
20	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	36	7.7
21	gb|AC182697.2| Populus trichocarpa clone Pop1-6M9, complete sequ...	36	7.7
22	emb|BX927195.18| Zebrafish DNA sequence from clone CH211-124E6 i...	36	7.7
23	gb|AC134099.2| Homo sapiens 3 BAC RP11-221B6 (Roswell Park Cance...	36	7.7
24	gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complet...	36	7.7
25	ref|XM_647468.1| Entamoeba histolytica HM-1:IMSS conserved hypot...	36	7.7
26	gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, com...	36	7.7
27	ref|XM_722211.1| Plasmodium yoelii yoelii str. 17XNL hypothetica...	36	7.7
28	gb|CP000302.1| Shewanella denitrificans OS217, complete genome	36	7.7
29	emb|AL365207.17| Human DNA sequence from clone RP11-420O24 on ch...	36	7.7
30	gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome	36	7.7
31	gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome...	36	7.7
32	gb|AC113404.3| Homo sapiens chromosome 5 clone RP11-466P24, comp...	36	7.7
33	gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete s...	36	7.7
34	gb|AC093521.3| Homo sapiens chromosome 5 clone RP11-152P24, comp...	36	7.7
35	gb|AC087465.5| Homo sapiens chromosome 15, clone RP11-94P14, com...	36	7.7
36	gb|AC139995.7| Mus musculus chromosome 1, clone RP23-427L3, comp...	36	7.7
37	gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, comp...	36	7.7
38	gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A...	36	7.7
39	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	36	7.7
40	emb|BX822461.1|CNS0A7F1 Arabidopsis thaliana Full-length cDNA Co...	36	7.7
41	gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome	36	7.7
42	emb|BX005245.26| Zebrafish DNA sequence from clone DKEY-56M15 in...	36	7.7
43	emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in ...	36	7.7
44	emb|AL772156.18| Mouse DNA sequence from clone RP23-406P12 on ch...	36	7.7
45	gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome	36	7.7
46	dbj|AB040052.1| Oryza sativa (japonica cultivar-group) mEF-G gen...	36	7.7

---

>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4, complete
              sequence
          Length = 150030

 Score = 40.1 bits (20), Expect = 0.50
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gatatttcatcaacatgctt 35
              ||||||||||||||||||||
Sbjct: 139743 gatatttcatcaacatgctt 139762

---

>ref|NM_207096.1| Danio rerio wingless-type MMTV integration site family, member 16
            (wnt16), mRNA
          Length = 2005

 Score = 40.1 bits (20), Expect = 0.50
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatatttcatcaacatgctt 35
            ||||||||||||||||||||
Sbjct: 1314 gatatttcatcaacatgctt 1295

---

>gb|BC066432.1| Danio rerio wingless-type MMTV integration site family, member 16,
            mRNA (cDNA clone MGC:77293 IMAGE:6965366), complete cds
          Length = 2005

 Score = 40.1 bits (20), Expect = 0.50
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   gatatttcatcaacatgctt 35
            ||||||||||||||||||||
Sbjct: 1314 gatatttcatcaacatgctt 1295

---

>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence
          Length = 179369

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    caaaacctggcaagttatg 55
             |||||||||||||||||||
Sbjct: 12603 caaaacctggcaagttatg 12621

---

>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence
          Length = 154918

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    caaaacctggcaagttatg 55
             |||||||||||||||||||
Sbjct: 88695 caaaacctggcaagttatg 88677

---

>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete sequence
          Length = 206191

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     acatgcttccaaaacctgg 46
              |||||||||||||||||||
Sbjct: 116577 acatgcttccaaaacctgg 116595

---

>gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, complete sequence
          Length = 174474

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     acatgcttccaaaacctgg 46
              |||||||||||||||||||
Sbjct: 145054 acatgcttccaaaacctgg 145072

---

>ref|XM_949099.1| Theileria annulata strain Ankara calcium/calmodulin-dependent
           protein kinase subunit (TA20165) partial mRNA
          Length = 1548

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 11  aacaagatatttcatcaac 29
           |||||||||||||||||||
Sbjct: 844 aacaagatatttcatcaac 826

---

>gb|AC110552.14| Mus musculus chromosome 17, clone RP23-247L7, complete sequence
          Length = 185205

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     aagatatttcatcaacatg 32
              |||||||||||||||||||
Sbjct: 129599 aagatatttcatcaacatg 129581

---

>emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C21 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 143163

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    acaagatatttcatcaaca 30
             |||||||||||||||||||
Sbjct: 24812 acaagatatttcatcaaca 24830

---

>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence
          Length = 174520

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     acaagatatttcatcaaca 30
              |||||||||||||||||||
Sbjct: 169567 acaagatatttcatcaaca 169585

---

>gb|AC093861.3| Homo sapiens BAC clone RP11-542I3 from 4, complete sequence
          Length = 203720

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     ttcatcaacatgcttccaa 39
              |||||||||||||||||||
Sbjct: 122702 ttcatcaacatgcttccaa 122720

---

>tpg|BK001605.1| TPA: TPA_exp: Mus musculus neuropsin (Opn5) gene, complete cds
          Length = 54532

 Score = 38.2 bits (19), Expect = 2.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    aagatatttcatcaacatg 32
             |||||||||||||||||||
Sbjct: 42257 aagatatttcatcaacatg 42275

---

>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence
          Length = 187158

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 34     ttccaaaacctggcaagt 51
              ||||||||||||||||||
Sbjct: 186607 ttccaaaacctggcaagt 186590

---

>gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190780

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     ttcatcaacatgcttcca 38
              ||||||||||||||||||
Sbjct: 128044 ttcatcaacatgcttcca 128027

---

>ref|XM_633941.1| Dictyostelium discoideum WD-40 repeat-containing protein
           (DDB0229872), partial mRNA
          Length = 2757

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 14  aagatatttcatcaacat 31
           ||||||||||||||||||
Sbjct: 338 aagatatttcatcaacat 355

---

>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete
              sequence
          Length = 151269

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     caacatgcttccaaaacc 43
              ||||||||||||||||||
Sbjct: 142430 caacatgcttccaaaacc 142447

---

>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence
          Length = 209326

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 34     ttccaaaacctggcaagt 51
              ||||||||||||||||||
Sbjct: 119377 ttccaaaacctggcaagt 119360

---

>ref|NG_003469.1| Rattus norvegicus olfactory receptor pseudogene 1634 (Olr1634-ps)
          on chromosome 15
          Length = 1142

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 13 caagatatttcatcaaca 30
          ||||||||||||||||||
Sbjct: 39 caagatatttcatcaaca 56

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 26       caacatgcttccaaaacc 43
                ||||||||||||||||||
Sbjct: 20224344 caacatgcttccaaaacc 20224361

---

>gb|AC182697.2| Populus trichocarpa clone Pop1-6M9, complete sequence
          Length = 58709

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    aacaagatatttcatcaa 28
             ||||||||||||||||||
Sbjct: 50747 aacaagatatttcatcaa 50764

---

>emb|BX927195.18| Zebrafish DNA sequence from clone CH211-124E6 in linkage group 19,
             complete sequence
          Length = 148711

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     acacaacaagatatttca 24
             ||||||||||||||||||
Sbjct: 85204 acacaacaagatatttca 85187

---

>gb|AC134099.2| Homo sapiens 3 BAC RP11-221B6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153726

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    gatatttcatcaacatgc 33
             ||||||||||||||||||
Sbjct: 41878 gatatttcatcaacatgc 41895

---

>gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complete sequence
          Length = 139848

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 9      acaacaagatatttcatcaaca 30
              |||| |||||||||||||||||
Sbjct: 127074 acaaaaagatatttcatcaaca 127095

---

>ref|XM_647468.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (114.t00007) partial mRNA
          Length = 2028

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 5   ttacacaacaagatattt 22
           ||||||||||||||||||
Sbjct: 380 ttacacaacaagatattt 397

---

>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence
          Length = 224996

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 9      acaacaagatatttcatcaaca 30
              |||| |||||||||||||||||
Sbjct: 187519 acaaaaagatatttcatcaaca 187498

---

>ref|XM_722211.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06624)
            partial mRNA
          Length = 4889

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 11   aacaagatatttcatcaa 28
            ||||||||||||||||||
Sbjct: 4065 aacaagatatttcatcaa 4048

---

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     atttcatcaacatgcttc 36
              ||||||||||||||||||
Sbjct: 273267 atttcatcaacatgcttc 273250

---

>emb|AL365207.17| Human DNA sequence from clone RP11-420O24 on chromosome 1 Contains a
            CpG island, complete sequence
          Length = 182679

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 3    cattacacaacaagatatttcatcaa 28
            ||||||||| |||| |||||||||||
Sbjct: 5540 cattacacatcaaggtatttcatcaa 5515

---

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 11      aacaagatatttcatcaa 28
               ||||||||||||||||||
Sbjct: 3975848 aacaagatatttcatcaa 3975865

---

>gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome 14, complete sequence
          Length = 205109

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     caagatatttcatcaaca 30
              ||||||||||||||||||
Sbjct: 136504 caagatatttcatcaaca 136521



 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    caagatatttcatcaaca 30
             ||||||||||||||||||
Sbjct: 79411 caagatatttcatcaaca 79428

---

>gb|AC113404.3| Homo sapiens chromosome 5 clone RP11-466P24, complete sequence
          Length = 197591

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 23    catcaacatgcttccaaaacctggca 48
             ||||||| || |||||||||||||||
Sbjct: 83206 catcaacctgattccaaaacctggca 83231

---

>gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete sequence
          Length = 130801

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    ttccaaaacctggcaagt 51
             ||||||||||||||||||
Sbjct: 72481 ttccaaaacctggcaagt 72464

---

>gb|AC093521.3| Homo sapiens chromosome 5 clone RP11-152P24, complete sequence
          Length = 143970

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 31    tgcttccaaaacctggca 48
             ||||||||||||||||||
Sbjct: 58066 tgcttccaaaacctggca 58049

---

>gb|AC087465.5| Homo sapiens chromosome 15, clone RP11-94P14, complete sequence
          Length = 163320

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 34    ttccaaaacctggcaagt 51
             ||||||||||||||||||
Sbjct: 22717 ttccaaaacctggcaagt 22700

---

>gb|AC139995.7| Mus musculus chromosome 1, clone RP23-427L3, complete sequence
          Length = 165802

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     cacaacaagatatttcat 25
             ||||||||||||||||||
Sbjct: 91346 cacaacaagatatttcat 91363

---

>gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, complete sequence
          Length = 200232

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 23     catcaacatgcttccaaaacctggca 48
              ||||||| || |||||||||||||||
Sbjct: 112423 catcaacctgattccaaaacctggca 112448

---

>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete
             sequence
          Length = 156929

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    caacatgcttccaaaacc 43
             ||||||||||||||||||
Sbjct: 19651 caacatgcttccaaaacc 19668

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 26       caacatgcttccaaaacc 43
                ||||||||||||||||||
Sbjct: 20217373 caacatgcttccaaaacc 20217390

---

>emb|BX822461.1|CNS0A7F1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZC02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2158

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 7   acacaacaagatatttca 24
           ||||||||||||||||||
Sbjct: 839 acacaacaagatatttca 856

---

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 6      tacacaacaagatatttc 23
              ||||||||||||||||||
Sbjct: 678345 tacacaacaagatatttc 678362

---

>emb|BX005245.26| Zebrafish DNA sequence from clone DKEY-56M15 in linkage group 4,
             complete sequence
          Length = 227565

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     attacacaacaagatatt 21
             ||||||||||||||||||
Sbjct: 95558 attacacaacaagatatt 95575

---

>emb|BX284682.7| Zebrafish DNA sequence from clone DKEYP-74C5 in linkage group 22,
              complete sequence
          Length = 206289

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 5      ttacacaacaagatatttcatc 26
              ||||||| ||||||||||||||
Sbjct: 174421 ttacacagcaagatatttcatc 174442

---

>emb|AL772156.18| Mouse DNA sequence from clone RP23-406P12 on chromosome 4, complete
              sequence
          Length = 157019

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 8      cacaacaagatatttcat 25
              ||||||||||||||||||
Sbjct: 125048 cacaacaagatatttcat 125065

---

>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     atttcatcaacatgcttc 36
              ||||||||||||||||||
Sbjct: 487903 atttcatcaacatgcttc 487886

---

>dbj|AB040052.1| Oryza sativa (japonica cultivar-group) mEF-G gene for mitochondrial
             elongation factor G, complete cds
          Length = 16307

 Score = 36.2 bits (18), Expect = 7.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    caacatgcttccaaaacc 43
             ||||||||||||||||||
Sbjct: 15664 caacatgcttccaaaacc 15681


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 541,190
Number of Sequences: 3902068
Number of extensions: 541190
Number of successful extensions: 151865
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151474
Number of HSP's gapped (non-prelim): 391
length of query: 55
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 35
effective length of database: 17,155,003,908
effective search space: 600425136780
effective search space used: 600425136780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)

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