>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  303 bits (153), Expect = 2e-79
 Identities = 254/286 (88%), Gaps = 10/286 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    agttgtgaacgcatcatgcaaca--------gatgatgttgtgcgt-gtcttgtgaatcg 51
            |||||||||||||||||||||||        ||||||||||||| | |||| |||||| |
Sbjct: 3683 agttgtgaacgcatcatgcaacaattatcaagatgatgttgtgcctagtctcgtgaatag 3624

                                                                        
Query: 52   tgatgtctggtaacaactccagatcagcccccaatgatccaatcgacatcgagatggtag 111
            | ||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 3623 ttatgtctggtaacaacccgagatcagcccccaatgatccgatcgacatcaagatggtag 3564

                                                                        
Query: 112  aaaggaaaa-tcagtcagtaatgtggcttaagcccccattcagcttacagtcactaatgc 170
            ||||||||| ||||||  |||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 3563 aaaggaaaaatcagtcgataatgtggcttaagcccccactcagcttacaatcactaatgc 3504

                                                                        
Query: 171  aactcatgacttgtcagtcgatcaggcatgaccaaccacaagatcatgtgaacacagatg 230
             ||||||||| ||||||||||||  |||||||||||||||||||||||| ||| |||| |
Sbjct: 3503 gactcatgacatgtcagtcgatccagcatgaccaaccacaagatcatgtaaacgcagaag 3444

                                                          
Query: 231  aagcgcttcttcagcggaagtagacagacacaagcgggatgtcgac 276
             |||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 3443 gagcgcttcttcagcggaagtagaccgacacaagtgggatgtcgac 3398

>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  159 bits (80), Expect = 6e-36
 Identities = 118/128 (92%), Gaps = 2/128 (1%)
 Strand = Plus / Minus

                                                                        
Query: 23   agatgatgttgtgcgt-gtcttgtgaatcgtgatgtctggtaacaactccagatcagccc 81
            |||||||||||||| | |||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3534 agatgatgttgtgcctagtctcgtgaatcatgatgtctggtaacaacccgagatcagccc 3475

                                                                        
Query: 82   ccaatgatccaatcgacatc-gagatggtagaaaggaaaatcagtcagtaatgtggctta 140
            |||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||
Sbjct: 3474 ccaatgatccgatcgacatcaaagatggtagaaaggaaaatcagtcggtaatgtggctta 3415

                    
Query: 141  agccccca 148
            ||||||||
Sbjct: 3414 agccccca 3407



 Score =  113 bits (57), Expect = 3e-22
 Identities = 84/93 (90%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcagtcgatcaggcatgaccaaccacaagatcatgtgaacacagatgaagcgcttcttca 243
            ||||| ||||| |||||||||||||||||||||| | ||| |||| | ||||||||||||
Sbjct: 3395 tcagtagatcaagcatgaccaaccacaagatcatttaaacgcagaaggagcgcttcttca 3336

                                             
Query: 244  gcggaagtagacagacacaagcgggatgtcgac 276
            |||||||||||| |||||||| |||||||||||
Sbjct: 3335 gcggaagtagaccgacacaagtgggatgtcgac 3303

>gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence
          Length = 836

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 245 cggaagtagacagacacaagcgggatgtcgac 276
           |||||||| | |||||||||||||||||||||
Sbjct: 779 cggaagtaaatagacacaagcgggatgtcgac 748

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      cttgtgaatcgtgatgtctg 60
               ||||||||||||||||||||
Sbjct: 2258336 cttgtgaatcgtgatgtctg 2258355

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      cttgtgaatcgtgatgtctg 60
               ||||||||||||||||||||
Sbjct: 2109514 cttgtgaatcgtgatgtctg 2109533

>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     tgaagcgcttcttcagcgga 248
               ||||||||||||||||||||
Sbjct: 1983686 tgaagcgcttcttcagcgga 1983705

>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 189286

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gagatggtagaaaggaaaat 121
              ||||||||||||||||||||
Sbjct: 153914 gagatggtagaaaggaaaat 153933

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    tcagtaatgtggcttaagccccca 148
              ||||||||||||||||| ||||||
Sbjct: 312039 tcagtaatgtggcttaaaccccca 312062

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    tcagtaatgtggcttaagccccca 148
              ||||||||||||||||| ||||||
Sbjct: 294937 tcagtaatgtggcttaaaccccca 294960

>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
            insert sequence
          Length = 3724

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 125  tcagtaatgtggcttaagccccca 148
            ||||||||||||||||| ||||||
Sbjct: 3580 tcagtaatgtggcttaaaccccca 3557

>dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I12, full
            insert sequence
          Length = 1533

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 125  tcagtaatgtggcttaagccccca 148
            ||||||||||||||||| ||||||
Sbjct: 1473 tcagtaatgtggcttaaaccccca 1450

>dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C03, full
            insert sequence
          Length = 1510

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 125  tcagtaatgtggcttaagccccca 148
            ||||||||||||||||| ||||||
Sbjct: 1364 tcagtaatgtggcttaaaccccca 1341

>emb|Z65094.1|HS19B9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 19b9, forward
           read cpg19b9.ft1a
          Length = 264

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 gaaaggaaaatcagtcagta 130
           ||||||||||||||||||||
Sbjct: 169 gaaaggaaaatcagtcagta 188

>emb|AM236324.1| Escherichia coli genome fragment containing the yersiniabactin, cob and
             pdu gene clusters, strain A0 34/86
          Length = 84189

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    cttgtgaatcgtgatgtctg 60
             ||||||||||||||||||||
Sbjct: 54791 cttgtgaatcgtgatgtctg 54810

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    tcagtaatgtggcttaagccccca 148
              ||||||||||||||||| ||||||
Sbjct: 294937 tcagtaatgtggcttaaaccccca 294960

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    tcagtaatgtggcttaagccccca 148
              ||||||||||||||||| ||||||
Sbjct: 312039 tcagtaatgtggcttaaaccccca 312062

>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 125   tcagtaatgtggcttaagccccca 148
             ||||||||||||||||| ||||||
Sbjct: 10056 tcagtaatgtggcttaaaccccca 10033

>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   tcagtaatgtggcttaagccccca 148
             ||||||||||||||||| ||||||
Sbjct: 45090 tcagtaatgtggcttaaaccccca 45113

>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 125  tcagtaatgtggcttaagccccca 148
            ||||||||||||||||| ||||||
Sbjct: 2255 tcagtaatgtggcttaaaccccca 2278


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,979,440
Number of Sequences: 3902068
Number of extensions: 1979440
Number of successful extensions: 34429
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34345
Number of HSP's gapped (non-prelim): 80
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)