ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 33 0.23
2SUVH7_ARATH (Q9C5P1) Histone-lysine N-methyltransferase, H3 lysi... 30 1.1
3EF2_SULAC (P23112) Elongation factor 2 (EF-2) 29 2.5
4NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 29 3.3
5WHITE_LUCCU (Q05360) Protein white 28 4.3
6C12A2_MUSDO (O18635) Cytochrome P450 CYP12A2 (EC 1.14.-.-) (CYPX... 28 5.7
7UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (E... 28 5.7
8UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (E... 28 7.4
9UROK_HUMAN (P00749) Urokinase-type plasminogen activator precurs... 27 9.7
10ANR_EISFO (Q75W84) Annetocin receptor 27 9.7
11EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelop... 27 9.7
12WDTC1_MOUSE (Q80ZK9) WD and tetratricopeptide repeats protein 1 27 9.7
13WDTC1_HUMAN (Q8N5D0) WD and tetratricopeptide repeats protein 1 27 9.7
14SYV_BUCBP (Q89AG3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 27 9.7
15SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10) (Beta-D... 27 9.7

>PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 447

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 337 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGL 233
           I DR       H+HV G+QEAEKG + +    KG+
Sbjct: 123 ISDRAHLVFDFHQHVDGMQEAEKGGKSLGTTKKGI 157



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>SUVH7_ARATH (Q9C5P1) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH7 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 7)
           (H3-K9-HMTase 7) (Suppressor of variegation 3-9 homolog
           protein 7) (Su(var)3-9 homolog protein 7) (Protein SET
           DOMAIN GR
          Length = 693

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
 Frame = +3

Query: 75  FMQNHQGCSNC----ILHRNCNCVTRNYD 149
           F +   GC NC     +H+NC CV RN D
Sbjct: 451 FDRQSLGCQNCRHQPCMHQNCTCVQRNGD 479



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>EF2_SULAC (P23112) Elongation factor 2 (EF-2)|
          Length = 736

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 337 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGLVV 227
           +E+RV P + I+K  + I+E +   QEI+KR   L++
Sbjct: 135 LEERVRPILFINKVDRLIKELKLSSQEIQKRLIDLII 171



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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 25  LTLRFLEQRKEKSAMKDLCKIIKDVAI--VSCTETATVSQE 141
           L LR  E RKE+  +K L KI+K   I  +  TET T   E
Sbjct: 557 LHLRTFELRKEQQRLKGLIKIVKPAEIPELKKTETQTTGAE 597



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>WHITE_LUCCU (Q05360) Protein white|
          Length = 677

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +1

Query: 1   SREHITVALTLRFLEQRKEKSAMKDLCKIIKDVAIVSCTET 123
           +REH+    T+R      +K  ++ + ++I+D++++ C  T
Sbjct: 179 AREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNT 219



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>C12A2_MUSDO (O18635) Cytochrome P450 CYP12A2 (EC 1.14.-.-) (CYPXIIA2)|
          Length = 537

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +1

Query: 55  EKSAMKDLCKIIKDVAIVSCTETATVSQETTINRYSGATTELGDTFYRSCGKNPQNARQL 234
           EKS ++ L KI K +A+V   +      +TT + ++G    L         KNP+  ++L
Sbjct: 308 EKSVLEKLVKIDKQIAMVMAMDMLMAGVDTTSSTFTGLLLCL--------AKNPEKQKKL 359



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>UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 22)
           (Ubiquitin-specific-processing protease 22)
           (Deubiquitinating enzyme 22)
          Length = 525

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 240 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 97
           RA   C +W  T  A +   + C      I+ + L HSC +C  + C+
Sbjct: 39  RAIYQCFVWSGTAEARKRKAKSCVCHVCGIHLNRL-HSCLYCVFFGCF 85



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>UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 22)
           (Ubiquitin-specific-processing protease 22)
           (Deubiquitinating enzyme 22)
          Length = 525

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 240 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 97
           RA   C +W  T  A +   + C      ++ + L HSC +C  + C+
Sbjct: 39  RAIYQCFVWSGTAEARKRKAKSCICHVCGVHLNRL-HSCLYCVFFGCF 85



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>UROK_HUMAN (P00749) Urokinase-type plasminogen activator precursor (EC|
           3.4.21.73) (uPA) (U-plasminogen activator) [Contains:
           Urokinase-type plasminogen activator long chain A;
           Urokinase-type plasminogen activator short chain A;
           Urokinase-type plasminogen
          Length = 431

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 87  HQGCSNCILHRNCNCVTRNYDKSIQWC 167
           HQ  SNC       CV+  Y  +I WC
Sbjct: 25  HQVPSNCDCLNGGTCVSNKYFSNIHWC 51



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>ANR_EISFO (Q75W84) Annetocin receptor|
          Length = 420

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 76  LCKIIKDVAIVSCTETATVSQETTINRYS 162
           LCK++K V +V+   +A V   T ++RY+
Sbjct: 121 LCKLVKYVQVVAMYASAYVLMSTAVDRYT 149



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>EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelope precursor|
            protein)
          Length = 2035

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +1

Query: 40   LEQR----KEKSAMKDLCKIIKDVAIVSCTETATVSQETTINRYSGA 168
            LEQ+    KEK  +K++ K+ KD+ +V   +T  +  E    R  GA
Sbjct: 1064 LEQKEMNVKEKVVVKEVVKVEKDLEMVKAAQTLRLQIEEDAARRKGA 1110



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>WDTC1_MOUSE (Q80ZK9) WD and tetratricopeptide repeats protein 1|
          Length = 677

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 54  RKVGYERFMQNHQGCSNCI 110
           R++G E  +Q H GC NC+
Sbjct: 35  RRLGLEAELQGHSGCVNCL 53



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>WDTC1_HUMAN (Q8N5D0) WD and tetratricopeptide repeats protein 1|
          Length = 677

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 54  RKVGYERFMQNHQGCSNCI 110
           R++G E  +Q H GC NC+
Sbjct: 35  RRLGLEAELQGHSGCVNCL 53



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>SYV_BUCBP (Q89AG3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 956

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 101 QLYLAQKLQLCHKKL 145
           Q+Y+  K QLCHKKL
Sbjct: 937 QIYIEHKTQLCHKKL 951



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>SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10)|
           (Beta-D-fructofuranosyl transferase) (Sucrose
           6-fructosyl transferase)
          Length = 795

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 82  KIIKDVAIVSCTETATVSQETTINRYSGATTELGDT 189
           K+I D A V    + T  Q  T+ + S +T E+G T
Sbjct: 94  KVITDNAAVESKASKTKDQAATVTKTSASTPEVGQT 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,868,469
Number of Sequences: 219361
Number of extensions: 820998
Number of successful extensions: 2334
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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