Clone Name | rbastl15e04 |
---|---|
Clone Library Name | barley_pub |
>PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 447 Score = 32.7 bits (73), Expect = 0.23 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -1 Query: 337 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGL 233 I DR H+HV G+QEAEKG + + KG+ Sbjct: 123 ISDRAHLVFDFHQHVDGMQEAEKGGKSLGTTKKGI 157
>SUVH7_ARATH (Q9C5P1) Histone-lysine N-methyltransferase, H3 lysine-9 specific| SUVH7 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 7) (H3-K9-HMTase 7) (Suppressor of variegation 3-9 homolog protein 7) (Su(var)3-9 homolog protein 7) (Protein SET DOMAIN GR Length = 693 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%) Frame = +3 Query: 75 FMQNHQGCSNC----ILHRNCNCVTRNYD 149 F + GC NC +H+NC CV RN D Sbjct: 451 FDRQSLGCQNCRHQPCMHQNCTCVQRNGD 479
>EF2_SULAC (P23112) Elongation factor 2 (EF-2)| Length = 736 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -1 Query: 337 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGLVV 227 +E+RV P + I+K + I+E + QEI+KR L++ Sbjct: 135 LEERVRPILFINKVDRLIKELKLSSQEIQKRLIDLII 171
>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)| (Solute carrier family 4 anion exchanger member 1 adapter protein) (Lung cancer oncogene 3 protein) Length = 796 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 25 LTLRFLEQRKEKSAMKDLCKIIKDVAI--VSCTETATVSQE 141 L LR E RKE+ +K L KI+K I + TET T E Sbjct: 557 LHLRTFELRKEQQRLKGLIKIVKPAEIPELKKTETQTTGAE 597
>WHITE_LUCCU (Q05360) Protein white| Length = 677 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/41 (24%), Positives = 24/41 (58%) Frame = +1 Query: 1 SREHITVALTLRFLEQRKEKSAMKDLCKIIKDVAIVSCTET 123 +REH+ T+R +K ++ + ++I+D++++ C T Sbjct: 179 AREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNT 219
>C12A2_MUSDO (O18635) Cytochrome P450 CYP12A2 (EC 1.14.-.-) (CYPXIIA2)| Length = 537 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = +1 Query: 55 EKSAMKDLCKIIKDVAIVSCTETATVSQETTINRYSGATTELGDTFYRSCGKNPQNARQL 234 EKS ++ L KI K +A+V + +TT + ++G L KNP+ ++L Sbjct: 308 EKSVLEKLVKIDKQIAMVMAMDMLMAGVDTTSSTFTGLLLCL--------AKNPEKQKKL 359
>UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)| (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22) Length = 525 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -2 Query: 240 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 97 RA C +W T A + + C I+ + L HSC +C + C+ Sbjct: 39 RAIYQCFVWSGTAEARKRKAKSCVCHVCGIHLNRL-HSCLYCVFFGCF 85
>UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)| (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22) Length = 525 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = -2 Query: 240 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 97 RA C +W T A + + C ++ + L HSC +C + C+ Sbjct: 39 RAIYQCFVWSGTAEARKRKAKSCICHVCGVHLNRL-HSCLYCVFFGCF 85
>UROK_HUMAN (P00749) Urokinase-type plasminogen activator precursor (EC| 3.4.21.73) (uPA) (U-plasminogen activator) [Contains: Urokinase-type plasminogen activator long chain A; Urokinase-type plasminogen activator short chain A; Urokinase-type plasminogen Length = 431 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +3 Query: 87 HQGCSNCILHRNCNCVTRNYDKSIQWC 167 HQ SNC CV+ Y +I WC Sbjct: 25 HQVPSNCDCLNGGTCVSNKYFSNIHWC 51
>ANR_EISFO (Q75W84) Annetocin receptor| Length = 420 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 76 LCKIIKDVAIVSCTETATVSQETTINRYS 162 LCK++K V +V+ +A V T ++RY+ Sbjct: 121 LCKLVKYVQVVAMYASAYVLMSTAVDRYT 149
>EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelope precursor| protein) Length = 2035 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +1 Query: 40 LEQR----KEKSAMKDLCKIIKDVAIVSCTETATVSQETTINRYSGA 168 LEQ+ KEK +K++ K+ KD+ +V +T + E R GA Sbjct: 1064 LEQKEMNVKEKVVVKEVVKVEKDLEMVKAAQTLRLQIEEDAARRKGA 1110
>WDTC1_MOUSE (Q80ZK9) WD and tetratricopeptide repeats protein 1| Length = 677 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 54 RKVGYERFMQNHQGCSNCI 110 R++G E +Q H GC NC+ Sbjct: 35 RRLGLEAELQGHSGCVNCL 53
>WDTC1_HUMAN (Q8N5D0) WD and tetratricopeptide repeats protein 1| Length = 677 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 54 RKVGYERFMQNHQGCSNCI 110 R++G E +Q H GC NC+ Sbjct: 35 RRLGLEAELQGHSGCVNCL 53
>SYV_BUCBP (Q89AG3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 956 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 Query: 101 QLYLAQKLQLCHKKL 145 Q+Y+ K QLCHKKL Sbjct: 937 QIYIEHKTQLCHKKL 951
>SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10)| (Beta-D-fructofuranosyl transferase) (Sucrose 6-fructosyl transferase) Length = 795 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 82 KIIKDVAIVSCTETATVSQETTINRYSGATTELGDT 189 K+I D A V + T Q T+ + S +T E+G T Sbjct: 94 KVITDNAAVESKASKTKDQAATVTKTSASTPEVGQT 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,868,469 Number of Sequences: 219361 Number of extensions: 820998 Number of successful extensions: 2334 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2332 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)