>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0|
          Length = 318

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/52 (40%), Positives = 23/52 (44%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 171
           IKEYLKDPSKFAV                            SDG++G SLFD
Sbjct: 267 IKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318

>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0|
          Length = 318

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 24/53 (45%), Positives = 24/53 (45%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 168
           IKEYLKDPSKFAV                            SD EMGFSLFDD
Sbjct: 267 IKEYLKDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318

>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0|
          Length = 320

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 171
           +KEYLKDPSKFAV                             SD +MGFSLFD
Sbjct: 268 VKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320

>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0|
          Length = 322

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XXXSDGEMGFSLFDD 168
           +KEYLKDPSKFA                               SD EMGF LFD+
Sbjct: 268 VKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322

>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 171
           IKEY+KDPSKFA                               D +MGF LFD
Sbjct: 265 IKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317

>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A|
          Length = 317

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLF 174
           +KE+LKDP+KFAV                            SDG+MGF LF
Sbjct: 268 VKEFLKDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316

>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B|
          Length = 320

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 168
           +KEYLKDPSKFAV                             D    F LFD+
Sbjct: 267 VKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319

>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)|
          Length = 317

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -3

Query: 326 IKEYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 171
           IKE++KDPSKF A                              D +MGF LFD
Sbjct: 265 IKEFIKDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317

>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)|
          Length = 319

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/52 (30%), Positives = 19/52 (36%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 171
           +K YL DP+ FAV                            SD +MGF LFD
Sbjct: 268 VKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319

>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C|
          Length = 323

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = -3

Query: 326 IKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 168
           +KE+LKDPSKF V                            SD    E GF LFD+
Sbjct: 267 VKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322

>MLH3_HUMAN (Q9UHC1) DNA mismatch repair protein Mlh3 (MutL protein homolog 3)|
          Length = 1453

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 211 RRNQMARWDSVCLTTKLCSVLHKAVSSRQFCLVFNTK 101
           R N++   DS    +KLCSVL     ++ FC++FN K
Sbjct: 895 RFNELPNSDSSRKDSKLCSVL-----TQDFCMLFNNK 926

>OR8BC_HUMAN (Q8NGG6) Olfactory receptor 8B12 (Olfactory receptor OR11-317)|
          Length = 310

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = -2

Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHALIF 4
           ++SF+    + SF  C T  FF  ++ + +  + L    Y   + +C+ L++
Sbjct: 81  LMSFVSRKNIISFTGCMTQLFFFCFFVVSESFI-LSAMAYDRYVAICNPLLY 131

>O10A7_HUMAN (Q8NGE5) Olfactory receptor 10A7|
          Length = 316

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -2

Query: 159 VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCHAL 10
           ++  + P  + SFV C T  +F  +++   E  +L +  Y   + +C+ L
Sbjct: 82  LVDLVSPRKIISFVGCGTQMYF-FFFFGSSECFLLSMMAYDRFVAICNPL 130

>R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7071

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -2

Query: 159  VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCH 16
            ++S ++  PV++ V      FF S+YY+ +  V +     S+  M+C+
Sbjct: 2343 IISIVQMAPVSAMV--RMYIFFASFYYIWKSYVHIMDGCTSSTCMMCY 2388

>R1AB_CVHSA (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:|
            Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains:
            Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
            (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC
            3.4.22.-) (3CL-PRO) (3
          Length = 7073

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -2

Query: 159  VLSFIKPCPVASFV*CSTLKFFKSYYYLEQELVMLFVSVYSNMLMLCH 16
            ++S ++  PV++ V      FF S+YY+ +  V +     S+  M+C+
Sbjct: 2345 IISIVQMAPVSAMV--RMYIFFASFYYIWKSYVHIMDGCTSSTCMMCY 2390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,680,381
Number of Sequences: 219361
Number of extensions: 379919
Number of successful extensions: 633
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)