>HRCA_HELPY (O24933) Heat-inducible transcription repressor hrcA homolog|
          Length = 266

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = -2

Query: 313 ILRNDGPLYHRKAGSKLFQT--TFCCCCKNAQRFEFLKS*HEFLKQGRKWNCKSLLISKP 140
           IL  +G LY   +      T   F    + + RFE LK   + LK   +      L+ KP
Sbjct: 56  ILSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFTLLKKP 115

Query: 139 GRNHLDRVILQDVNVLILRF-SLSCYPFHDMKL 44
               L+RVI  +   LIL F + SC   + +K+
Sbjct: 116 SLERLERVIECEKRFLILDFLAFSCALGYSVKM 148

>RNPA_RICPR (Q9ZCU8) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP|
           protein) (RNase P protein) (Protein C5)
          Length = 121

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = -2

Query: 280 KAGSKLFQTTFCCCCKNAQRFEFLKS*HEF---LKQGRKWNCKSLLISKPGRN--HLDRV 116
           K G K ++  F           FL+S +     +K  RK N K+++ +K  R   HL R+
Sbjct: 19  KLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVVRNKIKRRIRHLMRI 78

Query: 115 ILQDVNVLILRFSLSCYP 62
           I+ D N   ++F++   P
Sbjct: 79  IVNDSNFKAIKFAIIIIP 96

>G109B_HUMAN (P49019) Nicotinic acid receptor 2 (G-protein coupled receptor|
           109B) (G-protein coupled receptor HM74) (G-protein
           coupled receptor HM74B)
          Length = 387

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 132 FLPGFEISRDLQFHLRPCLRNSCQLFRNSNLWAFLQQQQKVVWNSLEPAFLWYSGPSF 305
           FLP   +   + + L      +C+++R+ +L  F+      + + L+P   ++S PSF
Sbjct: 244 FLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSF 301

>G109A_HUMAN (Q8TDS4) Nicotinic acid receptor 1 (G-protein coupled receptor|
           109A) (G-protein coupled receptor HM74A)
          Length = 363

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +3

Query: 132 FLPGFEISRDLQFHLRPCLRNSCQLFRNSNLWAFLQQQQKVVWNSLEPAFLWYSGPSF 305
           FLP   +   + + L      +C+++R+ +L  F+      + + L+P   ++S PSF
Sbjct: 244 FLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSF 301

>HRCA_HELPJ (Q9ZMW2) Heat-inducible transcription repressor hrcA homolog|
          Length = 266

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 223 RFEFLKS*HEFLKQGRKWNCKSLLISKPGRNHLDRVILQDVNVLILRF-SLSCYPFHDMK 47
           RFE LK   + LK   +      L+ KP    L+RVI  +   LIL F + SC   + +K
Sbjct: 88  RFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAVGYSVK 147

Query: 46  L 44
           +
Sbjct: 148 M 148


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,544,093
Number of Sequences: 219361
Number of extensions: 706187
Number of successful extensions: 1742
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)