ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl15c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds Length = 1450 Score = 791 bits (399), Expect = 0.0 Identities = 399/399 (100%) Strand = Plus / Minus Query: 5 gtttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatc 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1447 gtttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatc 1388 Query: 65 ccacggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaaggg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 ccacggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaaggg 1328 Query: 125 gaacatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 gaacatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcc 1268 Query: 185 tcctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1267 tcctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatc 1208 Query: 245 ctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1207 ctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaa 1148 Query: 305 gtcatcatcgtcctcaccggccttggaagcatcctcctcttccttcttcttttcagcctc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 gtcatcatcgtcctcaccggccttggaagcatcctcctcttccttcttcttttcagcctc 1088 Query: 365 gtcaaaagcagccttctcagcatccttgtgcttggccca 403 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 gtcaaaagcagccttctcagcatccttgtgcttggccca 1049
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds Length = 1472 Score = 791 bits (399), Expect = 0.0 Identities = 399/399 (100%) Strand = Plus / Minus Query: 5 gtttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatc 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1439 gtttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatc 1380 Query: 65 ccacggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaaggg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 ccacggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaaggg 1320 Query: 125 gaacatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 gaacatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcc 1260 Query: 185 tcctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 tcctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatc 1200 Query: 245 ctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaa 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaa 1140 Query: 305 gtcatcatcgtcctcaccggccttggaagcatcctcctcttccttcttcttttcagcctc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 gtcatcatcgtcctcaccggccttggaagcatcctcctcttccttcttcttttcagcctc 1080 Query: 365 gtcaaaagcagccttctcagcatccttgtgcttggccca 403 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 gtcaaaagcagccttctcagcatccttgtgcttggccca 1041
>dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, complete cds Length = 1558 Score = 248 bits (125), Expect = 1e-62 Identities = 184/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1304 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1245 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1244 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1185 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1184 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1125 Query: 381 tcagcatccttgtgcttggccca 403 ||||||||||||||||||||||| Sbjct: 1124 tcagcatccttgtgcttggccca 1102 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1410 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1372
>ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1143 tcagcatccttgtgcttgcccca 1121 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1429 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1391
>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1557 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1325 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1266 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1265 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1206 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1205 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1146 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1145 tcagcatccttgtgcttgcccca 1123 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1431 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1393
>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1585 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1171 tcagcatccttgtgcttgcccca 1149 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1457 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1419
>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full insert sequence Length = 1539 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1143 tcagcatccttgtgcttgcccca 1121 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaac 128 |||||||||||||||||||| |||| |||||| Sbjct: 1429 cttgtcaagtttctgatcacgaaaaagggaac 1398
>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full insert sequence Length = 1556 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1324 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1265 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1264 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1205 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1204 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1145 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1144 tcagcatccttgtgcttgcccca 1122 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1430 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1392
>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full insert sequence Length = 1586 Score = 240 bits (121), Expect = 3e-60 Identities = 183/203 (90%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 204 tagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcc 263 ||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292 Query: 264 ttgtcgtc---cttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctca 320 || || || |||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232 Query: 321 ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttc 380 |||||||||| ||| ||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172 Query: 381 tcagcatccttgtgcttggccca 403 |||||||||||||||||| |||| Sbjct: 1171 tcagcatccttgtgcttgcccca 1149 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1457 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1419
>ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1646 Score = 224 bits (113), Expect = 2e-55 Identities = 172/191 (90%), Gaps = 3/191 (1%) Strand = Plus / Minus Query: 216 tgcttctcatcatcagaatccttgtcatcctcagcatcagacccagccttgtcgtc---c 272 |||||||||||||||||||||||| ||||||| |||||||| ||||||| || || | Sbjct: 1304 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 1245 Query: 273 ttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctcaccggccttggaa 332 ||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||| | Sbjct: 1244 ttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggca 1185 Query: 333 gcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttg 392 || ||||||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 1184 gcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttg 1125 Query: 393 tgcttggccca 403 |||||| |||| Sbjct: 1124 tgcttgcccca 1114 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1520 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1482
>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full insert sequence Length = 1675 Score = 224 bits (113), Expect = 2e-55 Identities = 172/191 (90%), Gaps = 3/191 (1%) Strand = Plus / Minus Query: 216 tgcttctcatcatcagaatccttgtcatcctcagcatcagacccagccttgtcgtc---c 272 |||||||||||||||||||||||| ||||||| |||||||| ||||||| || || | Sbjct: 1333 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 1274 Query: 273 ttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctcaccggccttggaa 332 ||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||| | Sbjct: 1273 ttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggca 1214 Query: 333 gcatcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttg 392 || ||||||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 1213 gcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttg 1154 Query: 393 tgcttggccca 403 |||||| |||| Sbjct: 1153 tgcttgcccca 1143 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 1549 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1511
>gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA, complete cds Length = 1248 Score = 220 bits (111), Expect = 3e-54 Identities = 144/155 (92%) Strand = Plus / Minus Query: 249 gcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtca 308 |||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||| Sbjct: 1214 gcatcagacccagccttgtcatccttgtcctcgtcatcggcttcctcatcatccaagtca 1155 Query: 309 tcatcgtcctcaccggccttggaagcatcctcctcttccttcttcttttcagcctcgtca 368 ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1154 tcatcgtcctcactagccttggaagcatcctcctcttccttcttcttttcagcagcgtcg 1095 Query: 369 aaagcagccttctcagcatccttgtgcttggccca 403 ||||||||||||||||| ||||| ||||||||||| Sbjct: 1094 aaagcagccttctcagcttccttatgcttggccca 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 203 ctagagctcatcgtgcttctcatcatcaga 232 ||||||||||||||||||||| |||||||| Sbjct: 1248 ctagagctcatcgtgcttctcgtcatcaga 1219
>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds Length = 1545 Score = 113 bits (57), Expect = 4e-22 Identities = 170/207 (82%), Gaps = 3/207 (1%) Strand = Plus / Minus Query: 200 catctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagaccc 259 |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 1343 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcagagtc 1284 Query: 260 agccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctc 319 |||||||| || | ||| || ||| | |||||||| || | ||||||||| || || Sbjct: 1283 ggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatc 1224 Query: 320 a---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagc 376 | || |||||| |||||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1223 atccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagcagc 1164 Query: 377 cttctcagcatccttgtgcttggccca 403 ||| || || |||||||||||| |||| Sbjct: 1163 cttttctgcctccttgtgcttgcccca 1137
>emb|X78057.1|ZMCRHR Z.mays CRH mRNA Length = 1183 Score = 105 bits (53), Expect = 1e-19 Identities = 169/207 (81%), Gaps = 3/207 (1%) Strand = Plus / Minus Query: 200 catctagagctcatcgtgcttctcatcatcagaatccttgtcatcctcagcatcagaccc 259 |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 969 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcagagtc 910 Query: 260 agccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtcctc 319 |||||||| || | ||| || ||| | |||||||| || | ||||||||| || || Sbjct: 909 ggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctcatc 850 Query: 320 a---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagcagc 376 | || |||||| |||||||| |||||||| || || || ||||| ||||||||||| Sbjct: 849 atccccacccttggcggcatcctcttcttccttttttttctcggcctcatcaaaagcagc 790 Query: 377 cttctcagcatccttgtgcttggccca 403 ||| || || |||||||||||| |||| Sbjct: 789 cttttctgcctccttgtgcttgcccca 763
>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein Length = 1342 Score = 83.8 bits (42), Expect = 4e-13 Identities = 169/210 (80%), Gaps = 6/210 (2%) Strand = Plus / Minus Query: 200 catctagagctcatcgtgct---tctcatcatcagaatccttgtcatcctcagcatcaga 256 |||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 1327 catctagagctcgtcgtgctgcttctcatcatcagaatccttgctatcctcggcatcaga 1268 Query: 257 cccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtc 316 | |||||||| || | ||| || ||| | |||||||| || | ||||||||| || Sbjct: 1267 gtcggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctc 1208 Query: 317 ctca---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagc 373 ||| || |||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1207 atcatccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagc 1148 Query: 374 agccttctcagcatccttgtgcttggccca 403 |||||| || || |||||||||||| |||| Sbjct: 1147 agccttttctgcctccttgtgcttgcccca 1118
>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor Length = 1614 Score = 83.8 bits (42), Expect = 4e-13 Identities = 169/210 (80%), Gaps = 6/210 (2%) Strand = Plus / Minus Query: 200 catctagagctcatcgtgct---tctcatcatcagaatccttgtcatcctcagcatcaga 256 |||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 1344 catctagagctcgtcgtgctgcttctcatcatcagaatccttgctatcctcggcatcaga 1285 Query: 257 cccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtc 316 | |||||||| || | ||| || ||| | |||||||| || | ||||||||| || Sbjct: 1284 gtcggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctc 1225 Query: 317 ctca---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagc 373 ||| || |||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1224 atcatccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagc 1165 Query: 374 agccttctcagcatccttgtgcttggccca 403 |||||| || || |||||||||||| |||| Sbjct: 1164 agccttttctgcctccttgtgcttgcccca 1135
>gb|AY103855.1| Zea mays PCO074428 mRNA sequence Length = 1787 Score = 83.8 bits (42), Expect = 4e-13 Identities = 169/210 (80%), Gaps = 6/210 (2%) Strand = Plus / Minus Query: 200 catctagagctcatcgtgct---tctcatcatcagaatccttgtcatcctcagcatcaga 256 |||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 1401 catctagagctcgtcgtgctgcttctcatcatcagaatccttgctatcctcggcatcaga 1342 Query: 257 cccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagtcatcatcgtc 316 | |||||||| || | ||| || ||| | |||||||| || | ||||||||| || Sbjct: 1341 gtcggccttgtcctcgtctgccttctcatcgtcttcctcatcctctaggtcatcatcctc 1282 Query: 317 ctca---ccggccttggaagcatcctcctcttccttcttcttttcagcctcgtcaaaagc 373 ||| || |||||| |||||||| ||||||||||| || || ||||| |||||||| Sbjct: 1281 atcatccccacccttggcggcatcctcttcttccttctttttctcggcctcatcaaaagc 1222 Query: 374 agccttctcagcatccttgtgcttggccca 403 |||||| || || |||||||||||| |||| Sbjct: 1221 agccttttctgcctccttgtgcttgcccca 1192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 4e-10 Identities = 72/83 (86%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 216 tgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcctt---gtcgtcc 272 |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| || Sbjct: 8172867 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 8172808 Query: 273 ttgtcctcatcgtcggcatcctc 295 ||||||||||| || |||||||| Sbjct: 8172807 ttgtcctcatcctcagcatcctc 8172785 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 |||||||||||||||| || || |||||||||||||||||||||||||| Sbjct: 8172292 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 8172244 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 298 catccaagtcatcatcgtcctcaccggccttggaagcatcct 339 ||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 8172697 catccaaatcatcatcgtcctcaccggccttggcagcttcct 8172656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 8173083 cttgtcaagtttctgatcacgaaaaagggaacttcataa 8173045
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 73.8 bits (37), Expect = 4e-10 Identities = 72/83 (86%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 216 tgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcctt---gtcgtcc 272 |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| || Sbjct: 55890 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 55831 Query: 273 ttgtcctcatcgtcggcatcctc 295 ||||||||||| || |||||||| Sbjct: 55830 ttgtcctcatcctcagcatcctc 55808 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 |||||||||||||||| || || |||||||||||||||||||||||||| Sbjct: 55315 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 55267 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 298 catccaagtcatcatcgtcctcaccggccttggaagcatcct 339 ||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 55720 catccaaatcatcatcgtcctcaccggccttggcagcttcct 55679 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 56106 cttgtcaagtttctgatcacgaaaaagggaacttcataa 56068
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 73.8 bits (37), Expect = 4e-10 Identities = 72/83 (86%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 216 tgcttctcatcatcagaatccttgtcatcctcagcatcagacccagcctt---gtcgtcc 272 |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| || Sbjct: 106639 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 106580 Query: 273 ttgtcctcatcgtcggcatcctc 295 ||||||||||| || |||||||| Sbjct: 106579 ttgtcctcatcctcagcatcctc 106557 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 |||||||||||||||| || || |||||||||||||||||||||||||| Sbjct: 106064 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 106016 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 298 catccaagtcatcatcgtcctcaccggccttggaagcatcct 339 ||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 106469 catccaaatcatcatcgtcctcaccggccttggcagcttcct 106428 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 97 cttgtcaagtttctgatcacaaaaaggggaacatcataa 135 |||||||||||||||||||| |||| |||||| |||||| Sbjct: 106855 cttgtcaagtttctgatcacgaaaaagggaacttcataa 106817
>gb|AF325720.1|AF325720 Pennisetum ciliare calreticulin-like protein mRNA, partial cds Length = 851 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 357 tcagcctcgtcaaaagcagccttctcagcatccttgtgcttggccca 403 |||||||||||||| ||||| ||||||||||| ||||||||| |||| Sbjct: 362 tcagcctcgtcaaaggcagctttctcagcatctttgtgcttgcccca 316
>gb|AF052040.1|AF052040 Berberis stolonifera calreticulin mRNA, complete cds Length = 1547 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgt 393 ||||||||||| ||||| || || ||||| |||||||| |||||||| |||||||||| Sbjct: 1138 tcctcctcttctttctttttctctgcctcatcaaaagctgccttctcggcatccttgt 1081
>gb|U74630.1|RCU74630 Ricinus communis calreticulin mRNA, complete cds Length = 1514 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgt 393 ||||||||||| |||||||| || ||||| ||||| || |||||||||||||| |||| Sbjct: 1118 tcctcctcttctttcttcttctctgcctcttcaaatgctgccttctcagcatctttgt 1061
>gb|BT013428.1| Lycopersicon esculentum clone 132068F, mRNA sequence Length = 1600 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgc 395 |||||||| || |||||||||| || || |||||||||||||| |||||||| || ||| Sbjct: 1162 tcctcctcctctctcttcttttctgcttcctcaaaagcagccttttcagcatctttctgc 1103 Query: 396 tt 397 || Sbjct: 1102 tt 1101
>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin Length = 1564 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgc 395 |||||||| || ||||||| ||| ||| |||||||||||||| ||||||||||| ||| Sbjct: 1146 tcctcctcctctctcttcttctcaagctcctcaaaagcagccttttcagcatccttttgc 1087 Query: 396 tt 397 || Sbjct: 1086 tt 1085
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA, complete cds Length = 1444 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1132 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1084
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA, complete cds Length = 1492 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1132 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1084
>emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 on chromosome 3, complete sequence Length = 119364 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 |||||||||| |||||||| | |||||| ||||| || ||||||||||| Sbjct: 35403 cctcctcttctttcttcttcttagcctcttcaaatgctgccttctcagc 35451
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA Length = 1251 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1108 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1060
>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence Length = 129008 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 ||||||| || |||||||| |||||||| ||||| || ||||||||||| Sbjct: 43013 cctcctcctctttcttcttctcagcctcttcaaatgctgccttctcagc 43061
>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence Length = 96907 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 ||||||| || |||||||| |||||||| ||||| || ||||||||||| Sbjct: 28027 cctcctcctctttcttcttctcagcctcttcaaatgctgccttctcagc 27979
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds Length = 1278 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1105 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1057
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA, complete cds Length = 1440 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1132 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1084
>dbj|AK221956.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-51-K18 Length = 510 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 159 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 111
>emb|BX818380.1|CNS0ACP5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 465 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 114 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 66
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds Length = 1463 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 397 ||||||| ||||| |||||||| || || ||||| |||||||||||||| Sbjct: 1108 tcttcttctcagcttcgtcaaatgctgctttctccgcatccttgtgctt 1060
>gb|U74631.1|RCU74631 Ricinus communis calreticulin gene, complete cds Length = 4975 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagc 385 |||||||||| |||||||| || ||||| ||||| || ||||||||||| Sbjct: 4293 cctcctcttctttcttcttctctgcctcttcaaatgctgccttctcagc 4245
>gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, complete cds Length = 1593 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgc 395 ||||||||||| ||||| || || ||||| ||||| || |||| || ||||||||||| Sbjct: 1138 tcctcctcttctttctttttctctgcctcatcaaaggcttccttttcggcatccttgtgt 1079 Query: 396 ttggccca 403 |||||||| Sbjct: 1078 ttggccca 1071
>emb|AL808136.9| Mouse DNA sequence from clone RP23-75D13 on chromosome X, complete sequence Length = 183746 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttca 359 |||||||||||||||||||||||| Sbjct: 159046 tcctcctcttccttcttcttttca 159069
>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence Length = 198559 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 atcctcctcttccttcttctttt 357 ||||||||||||||||||||||| Sbjct: 58299 atcctcctcttccttcttctttt 58277
>gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, complete sequence Length = 201376 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 100850 tcctcctcttccttcttcttttc 100872 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 100753 tcctcctcttccttcttcttttc 100775
>ref|XM_470161.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 46.1 bits (23), Expect = 0.087 Identities = 47/55 (85%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgcttggccca 403 ||||||| ||||| || ||||| || || ||||||||||| || ||||||||||| Sbjct: 1114 tcttcttctcagcttcatcaaaggcggctttctcagcatctttatgcttggccca 1060
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 338 ctcctcttccttcttcttttcagcctc 364 |||||||||||||||||||||| |||| Sbjct: 100250 ctcctcttccttcttcttttcatcctc 100276 Score = 46.1 bits (23), Expect = 0.087 Identities = 26/27 (96%) Strand = Plus / Plus Query: 338 ctcctcttccttcttcttttcagcctc 364 |||||||||||||||||||||| |||| Sbjct: 100176 ctcctcttccttcttcttttcatcctc 100202 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctcctcttccttcttcttttc 358 ||||||||||||||||||||| Sbjct: 101674 ctcctcttccttcttcttttc 101694
>emb|X85382.1|NTRNATCAL N.tabacum mRNA for calreticulin Length = 1170 Score = 46.1 bits (23), Expect = 0.087 Identities = 38/43 (88%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatcctt 391 |||||||||| || || |||||||||||||| || |||||||| Sbjct: 1039 tcttcttttctgcttcctcaaaagcagccttttccgcatcctt 997
>gb|AC115885.29| Mus musculus chromosome 3, clone RP24-396D16, complete sequence Length = 186636 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 97004 tcctcctcttccttcttcttttc 96982
>gb|AC182767.3| Pan troglodytes BAC clone CH251-283B24 from chromosome 7, complete sequence Length = 155153 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 88936 tcctcctcttccttcttcttttc 88958
>gb|AC160998.4| Mus musculus BAC clone RP23-78N12 from chromosome 6, complete sequence Length = 279848 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 199224 tcctcctcttccttcttcttttc 199202
>gb|AC161052.2| Mus musculus BAC clone RP23-393J15 from chromosome 12, complete sequence Length = 201284 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 24038 tcctcctcttccttcttcttttc 24060
>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence Length = 177509 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 335 atcctcctcttccttcttctttt 357 ||||||||||||||||||||||| Sbjct: 169388 atcctcctcttccttcttctttt 169410
>emb|BX678775.3| Mouse DNA sequence from clone RP24-82E8 on chromosome 11, complete sequence Length = 65735 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 46005 tcctcctcttccttcttcttttc 46027
>gb|AC005067.2|AC005067 Homo sapiens BAC clone CTB-122E10 from 7q11.23-q21.1, complete sequence Length = 89448 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttc 358 ||||||||||||||||||||||| Sbjct: 46673 tcctcctcttccttcttcttttc 46695
>dbj|AK070712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060M04, full insert sequence Length = 1780 Score = 46.1 bits (23), Expect = 0.087 Identities = 47/55 (85%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgcttggccca 403 ||||||| ||||| || ||||| || || ||||||||||| || ||||||||||| Sbjct: 1219 tcttcttctcagcttcatcaaaggcggctttctcagcatctttatgcttggccca 1165
>gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome 13, complete sequence Length = 237111 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 85761 tcctcctcttccttcttctttt 85740
>gb|AC102220.8| Mus musculus chromosome 7, clone RP24-117E17, complete sequence Length = 182996 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 119729 tcctcctcttccttcttctttt 119708
>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence Length = 218847 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 64166 tcctcctcttccttcttctttt 64187
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 137337 tcctcctcttccttcttctttt 137358
>gb|AC084163.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-287D23, complete sequence Length = 214292 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 19146 tcctcctcttccttcttctttt 19125
>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence Length = 219870 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 203280 tcctcctcttccttcttctttt 203301
>gb|AC101542.19| Mus musculus chromosome 19, clone RP23-456B17, complete sequence Length = 165781 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 3602 tcctcctcttccttcttctttt 3581
>ref|XM_823622.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.4270) partial mRNA Length = 4365 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 276 tcctcatcgtcggcatcctcatcatccaagtcatcatc 313 ||||| || ||| ||||||||||||||| ||||||||| Sbjct: 3782 tcctcttcctcgtcatcctcatcatccatgtcatcatc 3745
>gb|AC130715.3| Mus musculus BAC clone RP23-460L16 from chromosome 2, complete sequence Length = 168935 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 112966 tcctcctcttccttcttctttt 112987
>gb|AC131705.4| Mus musculus BAC clone RP24-130N16 from chromosome 18, complete sequence Length = 122446 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 33688 tcctcctcttccttcttctttt 33667
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 206557 tcctcctcttccttcttctttt 206536
>gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207829 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 175130 tcctcctcttccttcttctttt 175151
>gb|AC004536.1| Homo sapiens PAC clone RP5-852D15 from 7, complete sequence Length = 44560 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 15732 tcctcctcttccttcttctttt 15753
>ref|XM_660420.1| Cryptosporidium hominis TU502 acidic ribosomal protein P2 (Chro.20020) partial mRNA Length = 339 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagc 361 ||||| |||||||||||||||||||| Sbjct: 299 tcctcttcttccttcttcttttcagc 274
>emb|Z71395.1|NPCAL1MNR N.plumbaginifolia mRNA for calreticulin Length = 1558 Score = 44.1 bits (22), Expect = 0.35 Identities = 52/62 (83%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgc 395 |||||||| || ||||||| || || || |||||||||||||| || |||||||| ||| Sbjct: 1155 tcctcctcctctctcttcttctctgcttcctcaaaagcagccttttccgcatccttctgc 1096 Query: 396 tt 397 || Sbjct: 1095 tt 1094
>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence Length = 201842 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 122200 tcctcctcttccttcttctttt 122179
>emb|AL663107.13| Mouse DNA sequence from clone RP23-465K20 on chromosome 11 Contains a novel gene (2210415F13Rik), an NADH dehydrogenase (ubiquinone) Fe-S protein 3 (Ndufs3) pseudogene, a novel pseudogene, a novel gene (1810065E05Rik), a novel gene similar to rat solute carrier family 11 member 1 (Slc11a1), a novel gene, the Olfr30 gene for olfactory receptor 30, an olfactory receptor (MOR284-1P) pseudogene, the gene for olfactory receptor MOR284-2 (LOC216774), a novel gene similar to MOR275 (LOC193140), a ribosomal protein L24 (Rpl24) pseudogene, the gene for olfactory receptor MOR275-1, a DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5) pseudogene, an olfactory receptor (MOR275-3) pseudogene and a CpG island, complete sequence Length = 191700 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 55538 tcctcctcttccttcttctttt 55559
>emb|AL604029.12| Mouse DNA sequence from clone RP23-155J3 on chromosome 11 Contains an H3 histone family 3A (H3f3a) pseudogene, the Zfp179 gene for zinc finger protein 179, the gene for the possible ortholog of H. sapiens microfibrillar-associated protein 4 (MFAP4) (1110007F23Rik), the Mapk7 gene for mitogen-activated kinase 7, a novel gene (3110043A19Rik), the Eppb9 gene for endothelial precursor protein B9, the Epn2 gene for epsin 2, a novel gene and three CpG islands, complete sequence Length = 204653 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 163081 tcctcctcttccttcttctttt 163102
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 338 ctcctcttccttcttcttttcagcct 363 |||||||||||||| ||||||||||| Sbjct: 65412 ctcctcttccttctccttttcagcct 65387
>gb|AC134836.6| Mus musculus BAC clone RP24-323I5 from chromosome 6, complete sequence Length = 150705 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 29055 tcctcctcttccttcttctttt 29076
>ref|XM_625382.1| Cryptosporidium parvum Iowa II 60S acidic ribosomal protein LP2 (cgd2_130), partial mRNA Length = 339 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagc 361 ||||| |||||||||||||||||||| Sbjct: 299 tcctcttcttccttcttcttttcagc 274
>gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203847 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 141211 tcctcctcttccttcttctttt 141232
>gb|AC009997.7| Homo sapiens chromosome 15 clone RP11-291H24 map 15q21.3, complete sequence Length = 200340 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 75502 tcctcctcttccttcttctttt 75481
>gb|AC096770.3| Homo sapiens BAC clone RP11-755P13 from 2, complete sequence Length = 197605 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 cctcctcttccttcttcttttc 358 |||||||||||||||||||||| Sbjct: 105036 cctcctcttccttcttcttttc 105057
>gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194397 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 131881 tcctcctcttccttcttctttt 131902
>gb|AY144884.1| Saccharomyces bayanus clone Contig2890 MNN4 gene, partial cds Length = 1130 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 886 tcctcctcttccttcttctttt 865
>emb|AL929149.8| Mouse DNA sequence from clone RP23-93B24 on chromosome 2, complete sequence Length = 153962 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 1335 tcctcctcttccttcttctttt 1356
>gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, complete sequence Length = 220813 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 214396 tcctcctcttccttcttctttt 214417
>emb|X80756.1|CAPCRTC C.annuum PCRTC mRNA Length = 1543 Score = 44.1 bits (22), Expect = 0.35 Identities = 52/62 (83%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgc 395 |||||||| || |||||||||| || || | |||||||||||| || |||||||| ||| Sbjct: 1097 tcctcctcctctctcttcttttctgcttcttgaaaagcagccttttccgcatccttctgc 1038 Query: 396 tt 397 || Sbjct: 1037 tt 1036
>gb|AF099744.1|AF099744 Cryptosporidium parvum acidic ribosomal protein P2 (ARP2) mRNA, complete cds Length = 336 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagc 361 ||||| |||||||||||||||||||| Sbjct: 296 tcctcttcttccttcttcttttcagc 271
>gb|AC121300.11| Mus musculus chromosome 6, clone RP23-408I12, complete sequence Length = 212218 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 134188 tcctcctcttccttcttctttt 134209
>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete sequence Length = 212028 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 211363 tcctcctcttccttcttctttt 211384
>gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome 13, complete sequence Length = 221491 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 16988 tcctcctcttccttcttctttt 17009
>gb|AC108825.15| Mus musculus chromosome 19, clone RP23-103N22, complete sequence Length = 202768 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 164041 tcctcctcttccttcttctttt 164062
>gb|AC131698.4| Mus musculus BAC clone RP23-428E12 from 3, complete sequence Length = 191438 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 180092 tcctcctcttccttcttctttt 180071
>dbj|AP004977.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT12A10, TM0160, complete sequence Length = 74313 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 39298 tcctcctcttccttcttctttt 39277
>emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chromosome 2, complete sequence Length = 122538 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctttt 357 |||||||||||||||||||||| Sbjct: 73177 tcctcctcttccttcttctttt 73198
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 148993 tcctcctcttccttcttcttt 148973
>gb|AC101763.8| Mus musculus chromosome 1, clone RP24-468E2, complete sequence Length = 143657 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 129953 tcctcctcttccttcttcttt 129973
>ref|XM_636892.1| Dictyostelium discoideum hypothetical protein (DDB0206214), partial mRNA Length = 3138 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cctcctcttccttcttctttt 357 ||||||||||||||||||||| Sbjct: 1231 cctcctcttccttcttctttt 1211
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 16666 tcctcctcttccttcttcttt 16646
>gb|DQ213908.1| Taeniopygia guttata clone 0061P0002B01 mRNA sequence Length = 752 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 catcctcctcttccttcttct 354 ||||||||||||||||||||| Sbjct: 529 catcctcctcttccttcttct 509
>gb|AC160028.9| Mus musculus 10 BAC RP24-570M12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 223055 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 204131 tcctcctcttccttcttcttt 204111
>gb|BT016475.1| Zea mays clone Contig308 mRNA sequence Length = 891 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 270 tccttgtcctcatcgtcggcatcctcatcatcc 302 |||||||| ||||| ||| |||||||||||||| Sbjct: 206 tccttgtcatcatcatcgtcatcctcatcatcc 174
>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence Length = 199109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 190654 tcctcctcttccttcttcttt 190634
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland Research Institute) complete sequence Length = 220401 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 tcctcttccttcttcttttca 359 ||||||||||||||||||||| Sbjct: 100310 tcctcttccttcttcttttca 100290
>ref|XM_957840.1| Neurospora crassa OR74A hypothetical protein (NCU06217.1) partial mRNA Length = 2319 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 tcgtccttgtcctcatcgtcggcatcctc 295 |||||||||||||||||||| ||||||| Sbjct: 941 tcgtccttgtcctcatcgtcttcatcctc 913
>ref|XM_326071.1| Neurospora crassa OR74A hypothetical protein (NCU06217.1) partial mRNA Length = 2319 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 tcgtccttgtcctcatcgtcggcatcctc 295 |||||||||||||||||||| ||||||| Sbjct: 941 tcgtccttgtcctcatcgtcttcatcctc 913
>gb|AC116787.10| Mus musculus chromosome 6, clone RP24-296D21, complete sequence Length = 189538 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cctcctcttccttcttctttt 357 ||||||||||||||||||||| Sbjct: 108626 cctcctcttccttcttctttt 108606
>gb|AC102445.11| Mus musculus chromosome 14, clone RP24-196M4, complete sequence Length = 157416 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 119405 tcctcctcttccttcttcttt 119385
>gb|AC159964.5| Mus musculus chromosome 1, clone RP24-321N12, complete sequence Length = 179413 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 54003 tcctcctcttccttcttcttt 53983
>gb|AC153504.6| Mus musculus 10 BAC RP23-324E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 18658 tcctcctcttccttcttcttt 18638
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 cctcctcttccttcttctttt 357 ||||||||||||||||||||| Sbjct: 41270 cctcctcttccttcttctttt 41250
>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 181157 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 tcctcttccttcttcttttca 359 ||||||||||||||||||||| Sbjct: 7979 tcctcttccttcttcttttca 7999
>ref|XM_757196.1| Ustilago maydis 521 hypothetical protein (UM06142.1) partial mRNA Length = 4362 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gtcgtccttgtcctcatcgtc 286 ||||||||||||||||||||| Sbjct: 2889 gtcgtccttgtcctcatcgtc 2869
>gb|AC140788.4| Mus musculus BAC clone RP23-452K24 from chromosome 2, complete sequence Length = 181527 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 55583 tcctcctcttccttcttcttt 55603
>gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome 3, complete sequence Length = 200490 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 11165 tcctcctcttccttcttcttt 11145
>gb|AC124370.3| Mus musculus BAC clone RP24-554F1 from chromosome 3, complete sequence Length = 181208 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 129808 tcctcctcttccttcttcttt 129788
>gb|AC125080.3| Mus musculus BAC clone RP24-68P23 from chromosome 16, complete sequence Length = 181087 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 27241 tcctcctcttccttcttcttt 27221
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 105790 tcctcctcttccttcttcttt 105810
>gb|AC125488.3| Mus musculus BAC clone RP23-75M24 from 12, complete sequence Length = 183202 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttcagcctc 364 |||||||| |||| ||||||||||||||| Sbjct: 84059 tcctcctcctcctccttcttttcagcctc 84031
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 13503 tcctcctcttccttcttcttt 13483
>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence Length = 235509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 166057 tcctcctcttccttcttcttt 166077 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 166026 tcctcctcttccttcttcttt 166046
>emb|Z98880.1|HS179P9 Human DNA sequence from clone RP1-179P9 on chromosome 6q22 Contains the 3' part of the ROS1 gene for v-ros UR2 sarcoma virus oncogene homolog 1 (avian), a novel gene and two CpG islands, complete sequence Length = 108260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 cctcctcttccttcttctttt 357 ||||||||||||||||||||| Sbjct: 51364 cctcctcttccttcttctttt 51384
>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel gene, complete sequence Length = 197322 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 tcctcttccttcttcttttcagcct 363 |||||||||| |||||||||||||| Sbjct: 3166 tcctcttcctccttcttttcagcct 3142
>emb|AL603902.4| Human DNA sequence from clone RP11-167I10 on chromosome 6 Contains the 3' end of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 158024 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctcctcttccttcttcttttc 358 ||||||||||||||||||||| Sbjct: 141051 ctcctcttccttcttcttttc 141071
>ref|XM_500868.1| Yarrowia lipolytica CLIB122, YALI0B14102g predicted mRNA Length = 2514 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 gtcctcatcgtcggcatcctcatca 299 ||||||||||||| ||||||||||| Sbjct: 1764 gtcctcatcgtcgtcatcctcatca 1740
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 4545 tcctcctcttccttcttcttt 4565 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 4514 tcctcctcttccttcttcttt 4534
>ref|XM_777937.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock protein 90-alpha (LOC577725), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 catcctcctcttccttcttct 354 ||||||||||||||||||||| Sbjct: 842 catcctcctcttccttcttct 822
>gb|AC163019.5| Mus musculus chromosome 19, clone RP24-290E5, complete sequence Length = 152969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 58734 tcctcctcttccttcttcttt 58754
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 58492 tcctcctcttccttcttcttt 58512
>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 238147 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ctcctcttccttcttcttttc 358 ||||||||||||||||||||| Sbjct: 195178 ctcctcttccttcttcttttc 195198
>gb|AC024295.7| Homo sapiens chromosome 11, clone RP11-108L12, complete sequence Length = 157094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 120426 tcctcctcttccttcttcttt 120406
>gb|AC109810.7| Homo sapiens chromosome 11, clone CTD-2537L20, complete sequence Length = 196235 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 47908 tcctcctcttccttcttcttt 47928
>gb|AC013558.10| Homo sapiens chromosome 18, clone RP11-41O4, complete sequence Length = 133557 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 gcagcctcctctcttccttgt 199 ||||||||||||||||||||| Sbjct: 50748 gcagcctcctctcttccttgt 50768
>gb|AY965681.1| Eptatretus stoutii nonfunctional variable lymphocyte receptor B (VLRB) gene, complete sequence Length = 76730 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 tgtcctcatcgtcggcatcctcatc 298 |||||||||||||| |||||||||| Sbjct: 20280 tgtcctcatcgtcgtcatcctcatc 20256
>gb|AC079772.6| Homo sapiens BAC clone RP11-256F13 from 4, complete sequence Length = 130743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 63523 tcctcctcttccttcttcttt 63543
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 gcatcctcctcttccttcttctttt 357 ||||||||||||| ||||||||||| Sbjct: 1019417 gcatcctcctctttcttcttctttt 1019441
>gb|DQ060428.1| Cryptosporidium parvum strain sucp heat shock protein 70-like gene, partial sequence Length = 1917 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaa 369 ||||||||||||||||||||| Sbjct: 1665 tcttcttttcagcctcgtcaa 1645
>gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211515 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 39333 tcctcctcttccttcttcttt 39313
>gb|AF332860.1|AF332860S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 3 and 4 Length = 147968 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 56789 tcctcctcttccttcttcttt 56809
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 149513 tcctcctcttccttcttcttt 149533
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gcatcctcctcttccttcttc 353 ||||||||||||||||||||| Sbjct: 24789035 gcatcctcctcttccttcttc 24789055
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 152386 tcctcctcttccttcttcttt 152406
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence Length = 201971 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 172698 tcctcctcttccttcttcttt 172678
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 88408 tcctcctcttccttcttcttt 88428
>gb|AY120918.1| Cryptosporidium sp. 1040 70 kDa heat shock protein gene, partial cds Length = 1916 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaa 369 ||||||||||||||||||||| Sbjct: 1675 tcttcttttcagcctcgtcaa 1655
>ref|XM_342793.2| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ22490 (predicted) (LOC362472), mRNA Length = 2394 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 1184 tcctcctcttccttcttcttt 1164
>gb|AC117440.5| Homo sapiens 3 BAC RP11-575C1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 199386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 88641 tcctcctcttccttcttcttt 88621
>gb|AF221533.1|AF221533 Cryptosporidium parvum isolate 499 heat shock protein 70 (HSP70) gene, partial cds Length = 1911 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 tcttcttttcagcctcgtcaa 369 ||||||||||||||||||||| Sbjct: 1657 tcttcttttcagcctcgtcaa 1637
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 gcatcctcctcttccttcttc 353 ||||||||||||||||||||| Sbjct: 89836 gcatcctcctcttccttcttc 89856
>emb|AL929262.22| Mouse DNA sequence from clone RP23-452K24 on chromosome 2, complete sequence Length = 145652 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 19773 tcctcctcttccttcttcttt 19793
>ref|XM_316060.2| Anopheles gambiae str. PEST ENSANGP00000012551 (ENSANGG00000010062), partial mRNA Length = 1653 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 tccttgtcctcatcgtcggca 290 ||||||||||||||||||||| Sbjct: 455 tccttgtcctcatcgtcggca 435
>dbj|AK063130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F06, full insert sequence Length = 632 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gcatcctcctcttccttcttc 353 ||||||||||||||||||||| Sbjct: 131 gcatcctcctcttccttcttc 111
>emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on chromosome 9, complete sequence Length = 193973 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 147886 tcctcctcttccttcttcttt 147906
>emb|CR760390.1| Xenopus tropicalis finished cDNA, clone TNeu053e21 Length = 982 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 atcctcatcatccaagtcatc 310 ||||||||||||||||||||| Sbjct: 588 atcctcatcatccaagtcatc 568
>gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, complete sequence Length = 191894 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 160319 tcctcctcttccttcttcttt 160299
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 285 tcggcatcctcatcatccaagtcatcatcgtcc 317 ||||||||||||||||| | |||||||||||| Sbjct: 4687072 tcggcatcctcatcatcaacttcatcatcgtcc 4687104
>gb|AC004167.1|AC004167 Homo sapiens chromosome 17, clone HRPC1096F1, complete sequence Length = 124876 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 77261 tcctcctcttccttcttcttt 77281
>emb|CT025535.14| Mouse DNA sequence from clone RP23-359O5 on chromosome 14, complete sequence Length = 193236 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 77417 tcctcctcttccttcttcttt 77437
>gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, complete sequence Length = 197405 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 17618 tcctcctcttccttcttcttt 17598
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence Length = 219234 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 85255 tcctcctcttccttcttcttt 85235
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 gtcctcatcgtcggcatcctcatca 299 ||||||||||||| ||||||||||| Sbjct: 1888807 gtcctcatcgtcgtcatcctcatca 1888783
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tggtttaacgactataagttc 23 ||||||||||||||||||||| Sbjct: 52511 tggtttaacgactataagttc 52531
>gb|AC161053.5| Mus musculus BAC clone RP23-381G13 from chromosome 3, complete sequence Length = 205395 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 138816 tcctcctcttccttcttcttt 138796
>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete sequence Length = 175689 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 tctcttccttgtcatctagag 208 ||||||||||||||||||||| Sbjct: 86671 tctcttccttgtcatctagag 86691
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 1940 tcctcctcttccttcttcttt 1920
>gb|J05138.1|RABCBP Rabbit calcium binding protein (calreticulin) mRNA, complete cds Length = 1865 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 ccttgtcgtccttgtcctcatcgtc 286 ||||||||||||||||||| ||||| Sbjct: 1237 ccttgtcgtccttgtcctcctcgtc 1213
>emb|AL713877.6| Mouse DNA sequence from clone RP23-248M8 on chromosome 4, complete sequence Length = 3994 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttt 356 ||||||||||||||||||||| Sbjct: 61 tcctcctcttccttcttcttt 81
>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence Length = 177661 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 24248 tcctcctcttccttcttctt 24267
>ref|NM_123497.1| Arabidopsis thaliana unknown protein AT5G41320 mRNA, complete cds Length = 1548 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 521 tcctcctcttccttcttctt 502
>ref|NM_121356.1| Arabidopsis thaliana ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ ubiquitin-protein lig> AT5G13530 mRNA, complete cds Length = 2505 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 tcatcgtcggcatcctcatcatcc 302 ||||||||| |||||||||||||| Sbjct: 299 tcatcgtcgtcatcctcatcatcc 276
>gb|AC146980.9| Mus musculus chromosome 3, clone RP24-97N14, complete sequence Length = 161054 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 74203 tcctcctcttccttcttctt 74184
>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence Length = 204098 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 159193 tcctcctcttccttcttctt 159212
>gb|AC164597.11| Mus musculus chromosome 15, clone RP23-108H23, complete sequence Length = 190235 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttt 356 |||||||||||||||||||| Sbjct: 8522 cctcctcttccttcttcttt 8503
>gb|AC168214.7| Mus musculus chromosome 15, clone RP24-373K19, complete sequence Length = 166835 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 41494 tcctcctcttccttcttctt 41513
>gb|AC141630.3| Mus musculus BAC clone RP24-243P7 from chromosome 14, complete sequence Length = 184075 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcatcctcctcttccttcttctt 355 |||||||||||| ||||||||||| Sbjct: 39172 agcatcctcctcctccttcttctt 39149
>gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, complete sequence Length = 207768 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 40665 tcctcctcttccttcttctt 40684
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 catcctcctcttccttcttc 353 |||||||||||||||||||| Sbjct: 218385 catcctcctcttccttcttc 218404 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 218176 tcctcctcttccttcttctt 218195
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 106134 tcctcctcttccttcttctt 106153
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 108206 tcctcctcttccttcttctt 108225
>ref|XM_629673.1| Dictyostelium discoideum hypothetical protein (DDB0184302), partial mRNA Length = 3726 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 tcatcatccaagtcatcatc 313 |||||||||||||||||||| Sbjct: 3260 tcatcatccaagtcatcatc 3241
>gb|AC166053.4| Mus musculus BAC clone RP24-122P17 from chromosome 14, complete sequence Length = 205155 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcatcctcctcttccttcttctt 355 |||||||||||| ||||||||||| Sbjct: 50176 agcatcctcctcctccttcttctt 50153
>gb|AC161870.4| Mus musculus BAC clone RP24-70M22 from chromosome 14, complete sequence Length = 240578 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcatcctcctcttccttcttctt 355 |||||||||||| ||||||||||| Sbjct: 169990 agcatcctcctcctccttcttctt 169967
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttca 359 |||||||||||||||||| ||||| Sbjct: 34295 tcctcctcttccttcttcatttca 34272
>ref|XM_450031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4040 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 23 tcctcctcttccttcttctt 42
>gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome 12, complete sequence Length = 163008 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 131991 tcctcctcttccttcttctt 132010
>gb|AC168156.2| Mus musculus chromosome 18, clone wi1-1130L14, complete sequence Length = 38265 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 23191 tcctcctcttccttcttctt 23172
>gb|AC159425.1| Trypanosoma brucei chromosome 3 clone RPCI93-27F10, complete sequence Length = 135196 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 atcctcatcatccaagtcatcatc 313 ||||||||||||| |||||||||| Sbjct: 126838 atcctcatcatccgagtcatcatc 126815
>gb|AC158121.12| Mus musculus chromosome 5, clone RP23-440H19, complete sequence Length = 202895 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 15230 tcctcctcttccttcttctt 15249
>ref|NM_153061.1| Mus musculus TGF-beta1-induced anti-apoptotic factor 2 (Tiaf2), mRNA Length = 1897 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 1092 tcctcctcttccttcttctt 1111
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttca 359 ||||||||||||| |||||||||| Sbjct: 51445 tcctcctcttcctccttcttttca 51468
>ref|NM_173037.1| Mus musculus expressed sequence AW413431 (AW413431), mRNA Length = 4409 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 4157 tcctcctcttccttcttctt 4138
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tcttccttcttcttttcagc 361 |||||||||||||||||||| Sbjct: 2093705 tcttccttcttcttttcagc 2093686
>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to 501670 (section 2 of 5) of the Complete Nucleotide Sequence Length = 251199 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 155568 tcctcctcttccttcttctt 155587
>gb|AY023682.1| Oryza sativa microsatellite MRG6007 containing (AAAG)X6, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 175 tcctcctcttccttcttctt 194
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 atcctcatcatccaagtcatcatc 313 ||||||||||||| |||||||||| Sbjct: 158039 atcctcatcatccgagtcatcatc 158062
>gb|AC166331.5| Mus musculus chromosome 3, clone RP23-277D9, complete sequence Length = 187537 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 67678 tcctcctcttccttcttctt 67659
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 115920 tcctcctcttccttcttctt 115901
>gb|AC158358.5| Mus musculus BAC clone RP23-429K3 from chromosome 14, complete sequence Length = 198706 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcatcctcctcttccttcttctt 355 |||||||||||| ||||||||||| Sbjct: 174103 agcatcctcctcctccttcttctt 174080
>gb|AC151968.3| Mus musculus BAC clone RP24-247B20 from chromosome 9, complete sequence Length = 191668 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 42254 tcctcctcttccttcttctt 42273
>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence Length = 196806 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 179985 tcctcctcttccttcttctt 179966
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 48112 tcctcctcttccttcttctt 48093
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 153264 tcctcctcttccttcttctt 153245
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 149098 tcctcctcttccttcttctt 149117
>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence Length = 140039 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttca 359 |||||||||||||||||| ||||| Sbjct: 98192 tcctcctcttccttcttcatttca 98169
>gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, complete sequence Length = 168009 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 8486 tcctcctcttccttcttctt 8467
>gb|AC130279.5| Mus musculus chromosome 1, clone RP24-394G12, complete sequence Length = 207735 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cctcctcttccttcttcttt 356 |||||||||||||||||||| Sbjct: 64290 cctcctcttccttcttcttt 64271
>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence Length = 196560 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 75555 tcctcctcttccttcttctt 75574
>gb|AC111109.6| Mus musculus chromosome 1, clone RP23-199D23, complete sequence Length = 208792 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttca 359 ||||||||||||||||||| |||| Sbjct: 88643 tcctcctcttccttcttctcttca 88620
>gb|BC065113.1| Mus musculus cut-like 2 (Drosophila), mRNA (cDNA clone MGC:85995 IMAGE:30532644), complete cds Length = 5133 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 cctcaccggccttggaagcatcctcctc 343 ||||| |||||||||||||| ||||||| Sbjct: 979 cctcatcggccttggaagcagcctcctc 952
>gb|AC112938.11| Mus musculus chromosome 5, clone RP24-72E12, complete sequence Length = 235924 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 115013 tcctcctcttccttcttctt 115032
>gb|AC165233.6| Mus musculus chromosome 8, clone RP23-307O2, complete sequence Length = 158925 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 catcctcctcttccttcttc 353 |||||||||||||||||||| Sbjct: 15089 catcctcctcttccttcttc 15108 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 14880 tcctcctcttccttcttctt 14899
>gb|AC134442.4| Mus musculus BAC clone RP24-104I4 from chromosome 8, complete sequence Length = 153086 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 14937 tcctcctcttccttcttctt 14956
>gb|AC107763.25| Mus musculus chromosome 5, clone RP23-180F3, complete sequence Length = 219488 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 43449 tcctcctcttccttcttctt 43430
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 134177 tcctcctcttccttcttctt 134196
>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence Length = 179465 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 146952 tcctcctcttccttcttctt 146933
>gb|AC129023.4| Mus musculus BAC clone RP23-430E12 from chromosome 18, complete sequence Length = 185832 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 135033 tcctcctcttccttcttctt 135014
>gb|AC144621.3| Mus musculus BAC clone RP24-335I14 from chromosome 17, complete sequence Length = 207330 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 60480 tcctcctcttccttcttctt 60461
>gb|AC122487.3| Mus musculus BAC clone RP24-381E21 from chromosome 17, complete sequence Length = 149666 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 116670 tcctcctcttccttcttctt 116689
>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence Length = 198403 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 65730 tcctcctcttccttcttctt 65749
>gb|AC147233.3| Mus musculus BAC clone RP23-350J18 from chromosome 8, complete sequence Length = 185319 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 27632 tcctcctcttccttcttctt 27613
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tcctcttccttcttcttttc 358 |||||||||||||||||||| Sbjct: 78474 tcctcttccttcttcttttc 78493
>ref|XM_653780.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1268.2), mRNA Length = 5535 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 1472 tcctcctcttccttcttctt 1453
>ref|XM_455812.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F16258g predicted mRNA Length = 1950 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 tcatcgtcggcatcctcatcatccaagt 306 ||||||||| |||| ||||||||||||| Sbjct: 1808 tcatcgtcgtcatcatcatcatccaagt 1781
>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence Length = 224985 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 206420 tcctcctcttccttcttctt 206439
>gb|AC161213.3| Mus musculus chromosome 3, clone RP23-77D22, complete sequence Length = 196596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 50542 tcctcctcttccttcttctt 50561
>gb|AC159879.2| Mus musculus BAC clone RP24-497H22 from chromosome 12, complete sequence Length = 201836 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 128732 tcctcctcttccttcttctt 128713
>gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, complete sequence Length = 197426 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 70608 tcctcctcttccttcttctt 70627
>gb|AC160864.9| Mus musculus 10 BAC RP23-425N2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190336 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 65656 tcctcctcttccttcttctt 65637
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 49383 tcctcctcttccttcttctt 49364
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 28571 tcctcctcttccttcttctt 28552
>gb|AC162887.5| Mus musculus chromosome 19, clone RP23-414O6, complete sequence Length = 190704 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 40039 tcctcctcttccttcttctt 40058
>gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, complete sequence Length = 182793 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 96864 tcctcctcttccttcttctt 96845
>gb|AC164618.3| Mus musculus BAC clone RP23-304L22 from chromosome 14, complete sequence Length = 208291 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 agcatcctcctcttccttcttctt 355 |||||||||||| ||||||||||| Sbjct: 183698 agcatcctcctcctccttcttctt 183675
>gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence Length = 199690 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 33754 tcctcctcttccttcttctt 33735
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 151142 tcctcctcttccttcttctt 151123
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 47746 tcctcctcttccttcttctt 47727
>gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, complete sequence Length = 167938 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttca 359 |||||||||| ||||||||||||| Sbjct: 100040 tcctcctctttcttcttcttttca 100017
>ref|XM_857631.1| PREDICTED: Canis familiaris hypothetical protein LOC608731 (LOC608731), mRNA Length = 603 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 197 tcctcctcttccttcttctt 178
>gb|AC139759.4| Mus musculus BAC clone RP23-385E10 from chromosome 18, complete sequence Length = 200426 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 69703 tcctcctcttccttcttctt 69684
>gb|AC024028.10| Homo sapiens BAC clone RP11-151M24 from 7, complete sequence Length = 176278 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 80840 tcctcctcttccttcttctt 80859
>gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, complete sequence Length = 171788 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tcctcttccttcttcttttc 358 |||||||||||||||||||| Sbjct: 17031 tcctcttccttcttcttttc 17050
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 139901 tcctcctcttccttcttctt 139882
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 90656 tcctcctcttccttcttctt 90637
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 150487 tcctcctcttccttcttctt 150468 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 150326 tcctcctcttccttcttctt 150307
>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence Length = 173527 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcctcttccttcttcttttc 358 |||||||||||||||||||| Sbjct: 105 tcctcttccttcttcttttc 86
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 207869 tcctcctcttccttcttctt 207888
>ref|XM_819049.1| Trypanosoma brucei TREU927 clone RPCI93-27F10 ATP-dependent DEAD/H RNA helicase (Tb927.3.620) partial mRNA Length = 2427 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 atcctcatcatccaagtcatcatc 313 ||||||||||||| |||||||||| Sbjct: 1443 atcctcatcatccgagtcatcatc 1420
>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete sequence Length = 174216 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 87712 tcctcctcttccttcttctt 87693
>emb|CR974455.5| Mouse DNA sequence from clone RP24-65D22 on chromosome 2, complete sequence Length = 193651 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttcttttca 359 |||||||| ||||||||||||||| Sbjct: 47656 tcctcctcctccttcttcttttca 47679
>ref|XM_749952.1| Aspergillus fumigatus Af293 RSC complex subunit RSC1 (Afu3g05560) partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 289 catcctcatcatccaagtcatcatcgtcctca 320 ||||||| |||||| |||||||||||||||| Sbjct: 640 catcctcgtcatcctcgtcatcatcgtcctca 609
>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence Length = 253013 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttcttttca 359 |||||||| ||||||||||||||| Sbjct: 150609 tcctcctcctccttcttcttttca 150586
>gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosome 18, complete sequence Length = 187634 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 165254 tcctcctcttccttcttctt 165273
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 106348 tcctcctcttccttcttctt 106329
>gb|AC129018.4| Mus musculus BAC clone RP24-463L19 from chromosome 10, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 69642 tcctcctcttccttcttctt 69661
>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence Length = 187545 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 47069 tcctcctcttccttcttctt 47050
>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence Length = 180794 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcctcctcttccttcttctt 355 |||||||||||||||||||| Sbjct: 164710 tcctcctcttccttcttctt 164691 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,698,085 Number of Sequences: 3902068 Number of extensions: 4698085 Number of successful extensions: 153430 Number of sequences better than 10.0: 552 Number of HSP's better than 10.0 without gapping: 552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151249 Number of HSP's gapped (non-prelim): 2154 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
