ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 137 3e-29
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
3dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
4dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
5dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA... 137 3e-29
6gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence 123 5e-25
7gb|AY107087.1| Zea mays PCO119798 mRNA sequence 117 3e-23
8gb|AY108675.1| Zea mays PCO066290 mRNA sequence 96 1e-16
9emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene) 88 3e-14
10gb|AY110048.1| Zea mays CL1207_1 mRNA sequence 88 3e-14
11ref|XM_479975.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
13dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
14dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
15gb|AY555143.1| Zea may BAC clone c573L14, complete sequence 84 4e-13
16ref|XM_480435.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
17dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
18dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
19dbj|AK120496.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
20dbj|AB077993.1| Oryza sativa mRNA for Roc1, complete cds 82 2e-12
21ref|XM_473974.1| Oryza sativa (japonica cultivar-group), predic... 66 1e-07
22gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 66 1e-07
23gb|U34743.1|PSU34743 Phalaenopsis sp. 'hybrid SM9108' homeobox p... 50 0.006
24gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRN... 46 0.093
25emb|AL096754.1|HSCN2E9 Human DNA sequence from clone LL22NC03-2E... 44 0.37
26gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 gro... 44 0.37
27gb|AC153804.1| Homo sapiens chromosome 2 clone fa0647, complete ... 42 1.5
28gb|S66114.1| ANP1 [Saccharomyces cerevisiae, mRNA, 2001 nt] 42 1.5
29gb|S65964.1| ARC: TIF51A...UTR2 [Saccharomyces cerevisiae, Genom... 42 1.5
30emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 ... 42 1.5
31dbj|AB210733.1| Ciona intestinalis mRNA for transcription factor... 42 1.5
32gb|U18779.1|SCE8199 Saccharomyces cerevisiae chromosome V cosmid... 42 1.5
33gb|AC139850.1| Homo sapiens BAC clone RP13-25D5 from 2, complete... 42 1.5
34gb|DQ331946.1| Synthetic construct Saccharomyces cerevisiae clon... 42 1.5
35gb|L22173.1|YSCRAD23CY Saccharomyces cerevisiae aminonitrophenyl... 42 1.5
36gb|L22171.1|YSCANP1A Saccharomyces cerevisiae aminonitrophenyl p... 42 1.5
37gb|AY627356.1| Human herpesvirus 2 strain Burr syn3 mutant glyco... 40 5.7
38gb|AY630441.1| Human herpesvirus 2 strain Burr glycoprotein B pr... 40 5.7
39gb|AY630440.1| Human herpesvirus 2 strain Burr syn1 mutant glyco... 40 5.7
40gb|AY022690.1| Oryza sativa microsatellite MRG5015 containing (C... 40 5.7
41gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
42emb|BX255935.27| Zebrafish DNA sequence from clone DKEYP-46H4 in... 40 5.7
43emb|X14112.1|HE1CG Human herpesvirus 1 complete genome 40 5.7
44gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete se... 40 5.7
45emb|BX927287.17| Zebrafish DNA sequence from clone DKEY-31N13 in... 40 5.7
46gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 5.7
47emb|BX051962.1|CNS09C9A Single read from an extremity of a full-... 40 5.7
48emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.7
49emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 40 5.7
50emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, stra... 40 5.7
51emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, ... 40 5.7
52emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 i... 40 5.7
53emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in l... 40 5.7
54emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, c... 40 5.7
55emb|BX548067.34| Zebrafish DNA sequence from clone DKEY-261O4 in... 40 5.7
56emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in... 40 5.7
57emb|BX640461.7| Zebrafish DNA sequence from clone CH211-227E10 i... 40 5.7
58dbj|AB252863.1| Human herpesvirus 1 UL27 gene for virion glycopr... 40 5.7
59emb|BX571664.8| Zebrafish DNA sequence from clone DKEYP-82H4 in ... 40 5.7
60dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 5.7
61gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, compl... 40 5.7
62gb|S74390.1| gBpath/UL27=glycoprotein B [herpes simplex virus ty... 40 5.7
63gb|AF295528.1|AF295528 Human herpesvirus 2 glycoprotein B2 (gB2)... 40 5.7
64gb|S65444.1| UL27=glycoprotein B [herpes simplex virus type 1 HS... 40 5.7
65dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
66gb|AF311740.1|AF311740 Human herpesvirus 1 strain KOS glycoprote... 40 5.7
67emb|BX548173.6| Zebrafish DNA sequence from clone DKEY-47K16 in ... 40 5.7
68gb|AF021340.1|AF021340 Human herpesvirus 2 glycoprotein B precur... 40 5.7
69gb|AF259899.1|AF259899 Human herpesvirus 1 glycoprotein B (UL27)... 40 5.7
70gb|AF097023.1|AF097023 Human herpesvirus 1 strain HSZP glycoprot... 40 5.7
71gb|AE004972.1| Halobacterium sp. NRC-1 section 3 of 170 of the c... 40 5.7
72gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, compl... 40 5.7
73dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
74emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 5.7
75emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in l... 40 5.7
76dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
77emb|BX005245.26| Zebrafish DNA sequence from clone DKEY-56M15 in... 40 5.7
78emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in ... 40 5.7
79emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 i... 40 5.7
80emb|CR847960.14| Zebrafish DNA sequence from clone DKEY-30E1 in ... 40 5.7
81emb|AL845295.21| Zebrafish DNA sequence from clone DKEY-285E18 i... 40 5.7
82emb|AL844197.6| Zebrafish DNA sequence from clone DKEY-156L9 in ... 40 5.7
83emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, co... 40 5.7
84gb|U12175.1|HHU12175 Human herpesvirus 2 WTW1A glycoprotein B (U... 40 5.7
85gb|U12174.1|HHU12174 Human herpesvirus 2 MMA glycoprotein B (UL2... 40 5.7
86gb|U12173.1|HHU12173 Human herpesvirus 2 JDZ3 glycoprotein B (UL... 40 5.7
87gb|U12172.1|HHU12172 Human herpesvirus 2 CAM4B glycoprotein B (U... 40 5.7
88gb|U49121.1|HHU49121 Human herpesvirus 1 strain ANG path, glycop... 40 5.7
89gb|M14923.1|HS2GB HSV2 glycoprotein B gene, complete cds 40 5.7
90gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
91gb|M24771.1|HS2GB2A Herpes simplex virus type 2 glycoprotein B (... 40 5.7
92gb|M15118.1|HS2GB3 HSV-2 (333) glycoprotein B gene, complete cds 40 5.7
93gb|K03541.1|HS1GBP HSV-1 (Patton) glycoprotein B gene, complete cds 40 5.7
94gb|K02720.1|HS1GBM HSV1 (mutant strain tsB5), glycoprotein B (gB... 40 5.7
95gb|M14164.1|HS1GBICP HSV1 (strain F) gB and ICP18.5 genes encodi... 40 5.7
96gb|K01760.1|HS1GB HSV1 (KOS) glycoprotein B gene, complete cds 40 5.7
97gb|M21629.1|HS1GLYB Herpes simplex virus type 1 glycoprotein B g... 40 5.7 
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                          
Query: 222    tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaagg 281
              |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 107379 tatgggcaccacatggcaaggacagtctgaggtgcgttcttgacttcccactgatgaaag 107438

                                   
Query: 282    ctccaaaattttgctgctcct 302
              |||||||||||||||||||||
Sbjct: 107439 ctccaaaattttgctgctcct 107459



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                          
Query: 60     aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 119
              |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 107244 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 107303

                            
Query: 120    tgcgtaggggtgac 133
              ||||||| ||||||
Sbjct: 107304 tgcgtagtggtgac 107317



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 375    gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
              |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 107635 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 107679
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                            
Query: 222      tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaagg 281
                |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 31934513 tatgggcaccacatggcaaggacagtctgaggtgcgttcttgacttcccactgatgaaag 31934572

                                     
Query: 282      ctccaaaattttgctgctcct 302
                |||||||||||||||||||||
Sbjct: 31934573 ctccaaaattttgctgctcct 31934593



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 60       aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 119
                |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 31934378 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 31934437

                              
Query: 120      tgcgtaggggtgac 133
                ||||||| ||||||
Sbjct: 31934438 tgcgtagtggtgac 31934451



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 375      gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
                |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 31934769 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 31934813
to top
>dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E18, full
            insert sequence
          Length = 2264

 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                        
Query: 222  tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaagg 281
            |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 1888 tatgggcaccacatggcaaggacagtctgaggtgcgttcttgacttcccactgatgaaag 1829

                                 
Query: 282  ctccaaaattttgctgctcct 302
            |||||||||||||||||||||
Sbjct: 1828 ctccaaaattttgctgctcct 1808



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 60   aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 119
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2023 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 1964

                          
Query: 120  tgcgtaggggtgac 133
            ||||||| ||||||
Sbjct: 1963 tgcgtagtggtgac 1950



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 1739 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 1695
to top
>dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D01, full
            insert sequence
          Length = 2343

 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                        
Query: 222  tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaagg 281
            |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 2033 tatgggcaccacatggcaaggacagtctgaggtgcgttcttgacttcccactgatgaaag 1974

                                 
Query: 282  ctccaaaattttgctgctcct 302
            |||||||||||||||||||||
Sbjct: 1973 ctccaaaattttgctgctcct 1953



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 60   aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 119
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2168 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2109

                          
Query: 120  tgcgtaggggtgac 133
            ||||||| ||||||
Sbjct: 2108 tgcgtagtggtgac 2095



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 1884 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 1840
to top
>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type
            homeodomain protein, complete cds
          Length = 3063

 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                        
Query: 222  tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaagg 281
            |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 2736 tatgggcaccacatggcaaggacagtctgaggtgcgttcttgacttcccactgatgaaag 2677

                                 
Query: 282  ctccaaaattttgctgctcct 302
            |||||||||||||||||||||
Sbjct: 2676 ctccaaaattttgctgctcct 2656



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 60   aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 119
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2871 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2812

                          
Query: 120  tgcgtaggggtgac 133
            ||||||| ||||||
Sbjct: 2811 tgcgtagtggtgac 2798



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 2587 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 2543
to top
>gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence
          Length = 526

 Score =  123 bits (62), Expect = 5e-25
 Identities = 78/82 (95%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 221 ctatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaag 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 237 ctatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatgaaa 296

                                 
Query: 281 gctccaaaattttgctgctcct 302
           |||| ||||  |||||||||||
Sbjct: 297 gctctaaaa-cttgctgctcct 317



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 56  tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 115
           |||||||||||||||||||||||||| ||| | ||| |||||||||| |  |||||||  
Sbjct: 83  tcagaggtagcagcatccgagaggccaacatgtagaggaagtcaatatcttaaccaacaa 142

                             
Query: 116 cccttgcgtaggggtgac 133
           ||||||||||| ||||||
Sbjct: 143 cccttgcgtagtggtgac 160



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 384 cttgatgcgctccacggtgcaggcgatgaggctgttgacggt 425
           |||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 402 cttgatgcgctccacggtgcgggcgatgaggctgttcacggt 443
to top
>gb|AY107087.1| Zea mays PCO119798 mRNA sequence
          Length = 736

 Score =  117 bits (59), Expect = 3e-23
 Identities = 79/85 (92%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                       
Query: 221 ctatgagcaccacatggcaag---gagagtctgaggtgcgttcttgacttcccactgatg 277
           |||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |
Sbjct: 311 ctatgagcaccacatggcaagcaggagagtctgaggtgcgttcttgacttcccactgacg 252

                                    
Query: 278 aaggctccaaaattttgctgctcct 302
           || |||| |||||||||||||||||
Sbjct: 251 aaagctctaaaattttgctgctcct 227



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                       
Query: 56  tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 115
           ||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||  
Sbjct: 469 tcagaggaagcagcatccgagaggccaacatgaagaggaagtcaatacccgaaccaacta 410

                             
Query: 116 cccttgcgtaggggtgac 133
           ||||||||| | ||||||
Sbjct: 409 cccttgcgtcgtggtgac 392



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 384 cttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
           |||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 145 cttgatgcgctccacggtgcaggcgatgaggctgttcaccgtggc 101
to top
>gb|AY108675.1| Zea mays PCO066290 mRNA sequence
          Length = 654

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                               
Query: 225 gagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgat 276
           |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 gagcaccacatggcaaggagagtctgaggtgcgttcttgactccccactgat 197



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 385 ttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
           ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 93  ttgatgcgctccacggtgcaggcgatgaggctgttcaccgtggc 50



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 93  gaagtcaatacccgaaccaaccgcccttgcgtaggggtgac 133
           ||||||||||||||||||| || ||||||| ||| ||||||
Sbjct: 320 gaagtcaatacccgaaccatccccccttgcatagtggtgac 280
to top
>emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene)
          Length = 3010

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 222  tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccact 273
            ||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 2607 tatgagcaccacacggcaaggagagtctgaggtgcgttcttgactccccact 2556



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                  
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
            |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2463 gacggcggccttgatgcgctcgacggtgcaggcgatgaggctgttcacggtggc 2410



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 93   gaagtcaatacccgaaccaaccgcccttgcgtaggggtgac 133
            ||||||||||||||||||| || ||||||| ||| ||||||
Sbjct: 2667 gaagtcaatacccgaaccatccccccttgcatagtggtgac 2627
to top
>gb|AY110048.1| Zea mays CL1207_1 mRNA sequence
          Length = 2985

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 222  tatgagcaccacatggcaaggagagtctgaggtgcgttcttgacttcccact 273
            ||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 2607 tatgagcaccacacggcaaggagagtctgaggtgcgttcttgactccccact 2556



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                  
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
            |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2463 gacggcggccttgatgcgctcgacggtgcaggcgatgaggctgttcacggtggc 2410
to top
>ref|XM_479975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2487

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                               
Query: 378  ggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
            ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2445 ggcggccttgatgcgctcgacggtgcaggcgatgaggctgttgacggtggc 2395
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                  
Query: 378     ggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
               ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2028743 ggcggccttgatgcgctcgacggtgcaggcgatgaggctgttgacggtggc 2028793



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                           
Query: 227     gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
               ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 5110037 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 5109978

                                  
Query: 284     ccaaaattttgctgctcct 302
               |||||||||||||||||||
Sbjct: 5109977 ccaaaattttgctgctcct 5109959



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                            
Query: 375     gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
               |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 5109798 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 5109754



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 245     agtctgaggtgcgttcttgacttcccac 272
               |||||| ||||||||||||||| |||||
Sbjct: 2028313 agtctgcggtgcgttcttgactccccac 2028340



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      agtcaatacccgaaccaacc 114
               ||||||||||||||||||||
Sbjct: 2027850 agtcaatacccgaaccaacc 2027869
to top
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                
Query: 378   ggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
             ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22273 ggcggccttgatgcgctcgacggtgcaggcgatgaggctgttgacggtggc 22323



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 245   agtctgaggtgcgttcttgacttcccac 272
             |||||| ||||||||||||||| |||||
Sbjct: 21843 agtctgcggtgcgttcttgactccccac 21870



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    agtcaatacccgaaccaacc 114
             ||||||||||||||||||||
Sbjct: 21380 agtcaatacccgaaccaacc 21399
to top
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                 
Query: 378    ggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
              ||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 153941 ggcggccttgatgcgctcgacggtgcaggcgatgaggctgttgacggtggc 153991



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 245    agtctgaggtgcgttcttgacttcccac 272
              |||||| ||||||||||||||| |||||
Sbjct: 153511 agtctgcggtgcgttcttgactccccac 153538



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     agtcaatacccgaaccaacc 114
              ||||||||||||||||||||
Sbjct: 153048 agtcaatacccgaaccaacc 153067
to top
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence
          Length = 144792

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 375   gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
             |||||| | |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70648 gacggcagccttgatgcgctcgacggtgcaggcgatgaggctgttgacggtggc 70595
to top
>ref|XM_480435.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3294

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                        
Query: 227  gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
            ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 2897 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 2838

                               
Query: 284  ccaaaattttgctgctcct 302
            |||||||||||||||||||
Sbjct: 2837 ccaaaattttgctgctcct 2819



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 2752 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 2708
to top
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0547A06
          Length = 150922

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                          
Query: 227    gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
              ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 147594 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 147535

                                 
Query: 284    ccaaaattttgctgctcct 302
              |||||||||||||||||||
Sbjct: 147534 ccaaaattttgctgctcct 147516



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                           
Query: 375    gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
              |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 147355 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 147311
to top
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0020B10
          Length = 136175

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                         
Query: 227   gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
             ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 59801 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 59742

                                
Query: 284   ccaaaattttgctgctcct 302
             |||||||||||||||||||
Sbjct: 59741 ccaaaattttgctgctcct 59723



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                          
Query: 375   gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
             |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 59562 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 59518
to top
>dbj|AK120496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120I03, full
            insert sequence
          Length = 3280

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                        
Query: 227  gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
            ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 2883 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 2824

                               
Query: 284  ccaaaattttgctgctcct 302
            |||||||||||||||||||
Sbjct: 2823 ccaaaattttgctgctcct 2805



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 2738 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 2694
to top
>dbj|AB077993.1| Oryza sativa mRNA for Roc1, complete cds
          Length = 3196

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 70/79 (88%), Gaps = 3/79 (3%)
 Strand = Plus / Minus

                                                                        
Query: 227  gcaccacatggcaaggagagtctgaggtgcgttcttgacttcccactgatga---aggct 283
            ||||||||||||||||||||| |||||||||||||||||| || |||| |||   |  ||
Sbjct: 2793 gcaccacatggcaaggagagtttgaggtgcgttcttgactccctactgctgaatcaaact 2734

                               
Query: 284  ccaaaattttgctgctcct 302
            |||||||||||||||||||
Sbjct: 2733 ccaaaattttgctgctcct 2715



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 2648 gacggcggccttgatgcgctccaccgtgcaggcgatgaggctgtt 2604
to top
>ref|XM_473974.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2346

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 375  gacggcggtcttgatgcgctccacggtgcaggcgatgaggctgtt 419
            |||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 2322 gacggccgccttgatgcgctccaccgtgcaggcgatgaggctgtt 2278
to top
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative
             Cf-2, fertilization-independent endosperm proteins,
             hypothetical protein, putative non-LTR retroelement
             reverse transcriptase, OCL5 protein, tryptophan synthase
             beta-subunit, hypothetical proteins, putative AP
             endonuclease, putative RNA polymerase II complex component
             SRB7, putative beta-1,3-glucanase, hypothetical protein,
             TNP2-like protein, hypothetical protein, putative
             phosphate/phosphoenolpyruvate translocator, putative
             protein, hypothetical proteins, putative
             galactosyltransferase family, hypothetical protein,
             putative cytochrome P450 family, putative lipid transfer
             protein, putative photoreceptor-interacting protein, and
             hypothetical protein genes, complete cds; and hypothetical
             protein gene, partial cds
          Length = 202197

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 384   cttgatgcgctccacggtgcaggcgatgaggctgttgacggtggc 428
             |||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 62901 cttgatgcgctcgacggtgcaggcaatgaggctgttgacagtggc 62857
to top
>gb|U34743.1|PSU34743 Phalaenopsis sp. 'hybrid SM9108' homeobox protein mRNA, complete cds
          Length = 3060

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 230  ccacatggcaaggagagtctgaggtgcgttcttgact 266
            |||| |||||||||  |||||||||||||||||||||
Sbjct: 2719 ccacgtggcaaggattgtctgaggtgcgttcttgact 2683
to top
>gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRNA, complete cds
          Length = 2679

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 92   tgaagtcaatacccgaaccaaccgcccttgc 122
            |||||||||||||||||||| || |||||||
Sbjct: 2616 tgaagtcaatacccgaaccacccacccttgc 2586
to top
>emb|AL096754.1|HSCN2E9 Human DNA sequence from clone LL22NC03-2E9 on chromosome 22, complete
            sequence
          Length = 19350

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 37   agaaccctagaaaagaaactca 58
            ||||||||||||||||||||||
Sbjct: 6754 agaaccctagaaaagaaactca 6733
to top
>gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 group F-like (NR2F2)
           mRNA, partial sequence
          Length = 861

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  gaagtcaatacccgaaccaacc 114
           ||||||||||||||||||||||
Sbjct: 743 gaagtcaatacccgaaccaacc 764
to top
>gb|AC153804.1| Homo sapiens chromosome 2 clone fa0647, complete sequence
          Length = 42005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   tctgatacagaacataggaag 322
             |||||||||||||||||||||
Sbjct: 35363 tctgatacagaacataggaag 35343
to top
>gb|S66114.1| ANP1 [Saccharomyces cerevisiae, mRNA, 2001 nt]
          Length = 2001

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 gggtgaccgcatcttgttttg 147
           |||||||||||||||||||||
Sbjct: 489 gggtgaccgcatcttgttttg 509
to top
>gb|S65964.1| ARC: TIF51A...UTR2 [Saccharomyces cerevisiae, Genomic, 7 genes, 7529
            nt]
          Length = 7529

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 127  gggtgaccgcatcttgttttg 147
            |||||||||||||||||||||
Sbjct: 1488 gggtgaccgcatcttgttttg 1508
to top
>emb|BX294395.15| Zebrafish DNA sequence from clone CH211-220B11 in linkage group 5,
             complete sequence
          Length = 213232

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   ataggaagattgatgaattga 335
             |||||||||||||||||||||
Sbjct: 67222 ataggaagattgatgaattga 67202
to top
>dbj|AB210733.1| Ciona intestinalis mRNA for transcription factor protein, complete
            cds, clone: ciht037i22
          Length = 3603

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 276  tgaaggctccaaaattttgct 296
            |||||||||||||||||||||
Sbjct: 2558 tgaaggctccaaaattttgct 2578
to top
>gb|U18779.1|SCE8199 Saccharomyces cerevisiae chromosome V cosmid 8199, 8334, and 9871
          Length = 36872

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   gggtgaccgcatcttgttttg 147
             |||||||||||||||||||||
Sbjct: 31290 gggtgaccgcatcttgttttg 31270
to top
>gb|AC139850.1| Homo sapiens BAC clone RP13-25D5 from 2, complete sequence
          Length = 67439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   tctgatacagaacataggaag 322
             |||||||||||||||||||||
Sbjct: 66262 tctgatacagaacataggaag 66242
to top
>gb|DQ331946.1| Synthetic construct Saccharomyces cerevisiae clone FLH201071.01X
           ANP1 gene, complete sequence
          Length = 1503

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 gggtgaccgcatcttgttttg 147
           |||||||||||||||||||||
Sbjct: 237 gggtgaccgcatcttgttttg 257
to top
>gb|L22173.1|YSCRAD23CY Saccharomyces cerevisiae aminonitrophenyl propanediol (ANP1), UV
            excision repair protein (RAD23), cytochrome c isozyme
            (CYC7) genes, complete cds
          Length = 7529

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 127  gggtgaccgcatcttgttttg 147
            |||||||||||||||||||||
Sbjct: 1488 gggtgaccgcatcttgttttg 1508
to top
>gb|L22171.1|YSCANP1A Saccharomyces cerevisiae aminonitrophenyl propanediol resistance
           (ANP1) gene, complete cds
          Length = 1800

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 gggtgaccgcatcttgttttg 147
           |||||||||||||||||||||
Sbjct: 348 gggtgaccgcatcttgttttg 368
to top
>gb|AY627356.1| Human herpesvirus 2 strain Burr syn3 mutant glycoprotein B precursor,
            gene, complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1482 ggtcttgatgcgctccacgg 1463
to top
>gb|AY630441.1| Human herpesvirus 2 strain Burr glycoprotein B precursor, gene,
            complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1482 ggtcttgatgcgctccacgg 1463
to top
>gb|AY630440.1| Human herpesvirus 2 strain Burr syn1 mutant glycoprotein B precursor,
            gene, complete cds
          Length = 2781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1482 ggtcttgatgcgctccacgg 1463
to top
>gb|AY022690.1| Oryza sativa microsatellite MRG5015 containing (CCG)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  gaagaaccctagaaaagaaa 54
           ||||||||||||||||||||
Sbjct: 101 gaagaaccctagaaaagaaa 82
to top
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    gaagaaccctagaaaagaaa 54
             ||||||||||||||||||||
Sbjct: 20438 gaagaaccctagaaaagaaa 20457
to top
>emb|BX255935.27| Zebrafish DNA sequence from clone DKEYP-46H4 in linkage group 14,
              complete sequence
          Length = 163552

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 128975 tctgatacagaacataggaa 128956
to top
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome
          Length = 152261

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   ggtcttgatgcgctccacgg 400
             ||||||||||||||||||||
Sbjct: 54304 ggtcttgatgcgctccacgg 54323
to top
>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence
          Length = 95710

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    aagtcaatacccgaaccaac 113
             ||||||||||||||||||||
Sbjct: 87721 aagtcaatacccgaaccaac 87702
to top
>emb|BX927287.17| Zebrafish DNA sequence from clone DKEY-31N13 in linkage group 5,
             complete sequence
          Length = 153905

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 47805 tctgatacagaacataggaa 47824
to top
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 152     atgttttcttgcatggaacgaaaa 175
               |||||| |||||||||||||||||
Sbjct: 1076722 atgtttgcttgcatggaacgaaaa 1076745
to top
>emb|BX051962.1|CNS09C9A Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC29DA02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 865

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 cggcggtcttgatgcgctcc 396
           ||||||||||||||||||||
Sbjct: 488 cggcggtcttgatgcgctcc 469
to top
>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9
          Length = 81835

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gaagtcaatacccgaaccaa 112
             ||||||||||||||||||||
Sbjct: 21460 gaagtcaatacccgaaccaa 21479
to top
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   ggtcttgatgcgctccacgg 400
             ||||||||||||||||||||
Sbjct: 54636 ggtcttgatgcgctccacgg 54655
to top
>emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 6/11
          Length = 346161

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    tttccccggtcgaattcaca 205
              ||||||||||||||||||||
Sbjct: 220286 tttccccggtcgaattcaca 220305
to top
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
          Length = 198067

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gaagtcaatacccgaaccaa 112
             ||||||||||||||||||||
Sbjct: 16472 gaagtcaatacccgaaccaa 16491
to top
>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3,
              complete sequence
          Length = 162342

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 149861 tctgatacagaacataggaa 149880
to top
>emb|BX571813.8| Zebrafish DNA sequence from clone DKEY-14O6 in linkage group 3, complete
              sequence
          Length = 233901

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 189346 tctgatacagaacataggaa 189365



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 26207 tctgatacagaacataggaa 26226
to top
>emb|BX088603.12| Zebrafish DNA sequence from clone DKEYP-44D3, complete sequence
          Length = 177056

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 75235 tctgatacagaacataggaa 75216
to top
>emb|BX548067.34| Zebrafish DNA sequence from clone DKEY-261O4 in linkage group 5, complete
              sequence
          Length = 181547

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 154484 tctgatacagaacataggaa 154465
to top
>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20
             Contains two novel genes and two CpG islands, complete
             sequence
          Length = 200339

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 33197 tctgatacagaacataggaa 33216
to top
>emb|BX640461.7| Zebrafish DNA sequence from clone CH211-227E10 in linkage group 4,
              complete sequence
          Length = 190826

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 148520 tctgatacagaacataggaa 148539
to top
>dbj|AB252863.1| Human herpesvirus 1 UL27 gene for virion glycoprotein B, complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1491 ggtcttgatgcgctccacgg 1472
to top
>emb|BX571664.8| Zebrafish DNA sequence from clone DKEYP-82H4 in linkage group 4,
             complete sequence
          Length = 204160

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 97064 tctgatacagaacataggaa 97045
to top
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    gaattgaacgaagctactgc 348
              ||||||||||||||||||||
Sbjct: 786293 gaattgaacgaagctactgc 786312
to top
>gb|AC019315.9| Homo sapiens chromosome , clone RP11-153A6, complete sequence
          Length = 152057

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ctgatgaaggctccaaaatt 291
             ||||||||||||||||||||
Sbjct: 91059 ctgatgaaggctccaaaatt 91078
to top
>gb|S74390.1| gBpath/UL27=glycoprotein B [herpes simplex virus type 1 HSV-1,
           ANGpath, Genomic Mutant, 1478 nt]
          Length = 1478

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 ggtcttgatgcgctccacgg 400
           ||||||||||||||||||||
Sbjct: 956 ggtcttgatgcgctccacgg 975
to top
>gb|AF295528.1|AF295528 Human herpesvirus 2 glycoprotein B2 (gB2) mRNA, complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1482 ggtcttgatgcgctccacgg 1463
to top
>gb|S65444.1| UL27=glycoprotein B [herpes simplex virus type 1 HSV-1, ANG,
           Genomic, 1488 nt]
          Length = 1488

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 ggtcttgatgcgctccacgg 400
           ||||||||||||||||||||
Sbjct: 528 ggtcttgatgcgctccacgg 509
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       gaagaaccctagaaaagaaa 54
                ||||||||||||||||||||
Sbjct: 29535936 gaagaaccctagaaaagaaa 29535955
to top
>gb|AF311740.1|AF311740 Human herpesvirus 1 strain KOS glycoprotein B gene, complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1491 ggtcttgatgcgctccacgg 1472
to top
>emb|BX548173.6| Zebrafish DNA sequence from clone DKEY-47K16 in linkage group 21,
             complete sequence
          Length = 210873

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 39725 tctgatacagaacataggaa 39706
to top
>gb|AF021340.1|AF021340 Human herpesvirus 2 glycoprotein B precursor (UL27) gene, complete
            cds
          Length = 2818

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1482 ggtcttgatgcgctccacgg 1463
to top
>gb|AF259899.1|AF259899 Human herpesvirus 1 glycoprotein B (UL27) gene, complete cds
          Length = 2809

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1528 ggtcttgatgcgctccacgg 1509
to top
>gb|AF097023.1|AF097023 Human herpesvirus 1 strain HSZP glycoprotein B (UL27) gene, complete
            cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1491 ggtcttgatgcgctccacgg 1472
to top
>gb|AE004972.1| Halobacterium sp. NRC-1 section 3 of 170 of the complete genome
          Length = 10053

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 atgacggcggtcttgatgcg 392
           ||||||||||||||||||||
Sbjct: 520 atgacggcggtcttgatgcg 539
to top
>gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, complete sequence
          Length = 180529

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    agaaaagaaactcagaggta 64
             ||||||||||||||||||||
Sbjct: 84895 agaaaagaaactcagaggta 84914
to top
>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09,
          full insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gaagaaccctagaaaagaaa 54
          ||||||||||||||||||||
Sbjct: 55 gaagaaccctagaaaagaaa 36
to top
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    gctccacggtgcaggcgatg 411
              ||||||||||||||||||||
Sbjct: 540585 gctccacggtgcaggcgatg 540604
to top
>emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in linkage group 19,
             complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   gcaaatgttttcttgcatgg 167
             ||||||||||||||||||||
Sbjct: 61717 gcaaatgttttcttgcatgg 61736
to top
>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10,
          full insert sequence
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 35 gaagaaccctagaaaagaaa 54
          ||||||||||||||||||||
Sbjct: 56 gaagaaccctagaaaagaaa 37
to top
>emb|BX005245.26| Zebrafish DNA sequence from clone DKEY-56M15 in linkage group 4, complete
              sequence
          Length = 227565

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tctgatacagaacataggaa 321
              ||||||||||||||||||||
Sbjct: 155917 tctgatacagaacataggaa 155936
to top
>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14,
             complete sequence
          Length = 157355

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 47990 tctgatacagaacataggaa 48009
to top
>emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 in linkage group 14,
             complete sequence
          Length = 194617

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 64458 tctgatacagaacataggaa 64477
to top
>emb|CR847960.14| Zebrafish DNA sequence from clone DKEY-30E1 in linkage group 10,
             complete sequence
          Length = 216655

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tttcttgcatggaacgaaaa 175
             ||||||||||||||||||||
Sbjct: 90828 tttcttgcatggaacgaaaa 90847
to top
>emb|AL845295.21| Zebrafish DNA sequence from clone DKEY-285E18 in linkage group 4,
             complete sequence
          Length = 162785

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tctgatacagaacataggaa 321
             ||||||||||||||||||||
Sbjct: 21516 tctgatacagaacataggaa 21535
to top
>emb|AL844197.6| Zebrafish DNA sequence from clone DKEY-156L9 in linkage group 10,
              complete sequence
          Length = 184895

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    tttcttgcatggaacgaaaa 175
              ||||||||||||||||||||
Sbjct: 137709 tttcttgcatggaacgaaaa 137690
to top
>emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, complete sequence
          Length = 183864

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   gcaaatgttttcttgcatgg 167
             ||||||||||||||||||||
Sbjct: 79430 gcaaatgttttcttgcatgg 79411
to top
>gb|U12175.1|HHU12175 Human herpesvirus 2 WTW1A glycoprotein B (UL27) gene, complete cds
          Length = 2855

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1517 ggtcttgatgcgctccacgg 1498
to top
>gb|U12174.1|HHU12174 Human herpesvirus 2 MMA glycoprotein B (UL27) gene, complete cds
          Length = 2846

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1508 ggtcttgatgcgctccacgg 1489
to top
>gb|U12173.1|HHU12173 Human herpesvirus 2 JDZ3 glycoprotein B (UL27) gene, complete cds
          Length = 2855

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1517 ggtcttgatgcgctccacgg 1498
to top
>gb|U12172.1|HHU12172 Human herpesvirus 2 CAM4B glycoprotein B (UL27) gene, complete cds
          Length = 2846

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1508 ggtcttgatgcgctccacgg 1489
to top
>gb|U49121.1|HHU49121 Human herpesvirus 1 strain ANG path, glycoprotein B (gB) gene,
            complete cds
          Length = 2715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1491 ggtcttgatgcgctccacgg 1472
to top
>gb|M14923.1|HS2GB HSV2 glycoprotein B gene, complete cds
          Length = 3324

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 2029 ggtcttgatgcgctccacgg 2010
to top
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     gaagaaccctagaaaagaaa 54
              ||||||||||||||||||||
Sbjct: 120206 gaagaaccctagaaaagaaa 120225
to top
>gb|M24771.1|HS2GB2A Herpes simplex virus type 2 glycoprotein B (gB2) gene, complete cds
          Length = 3715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 2031 ggtcttgatgcgctccacgg 2012
to top
>gb|M15118.1|HS2GB3 HSV-2 (333) glycoprotein B gene, complete cds
          Length = 3472

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1790 ggtcttgatgcgctccacgg 1771
to top
>gb|K03541.1|HS1GBP HSV-1 (Patton) glycoprotein B gene, complete cds
          Length = 3643

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 1929 ggtcttgatgcgctccacgg 1910
to top
>gb|K02720.1|HS1GBM HSV1 (mutant strain tsB5), glycoprotein B (gB) gene
          Length = 1857

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 ggtcttgatgcgctccacgg 400
           ||||||||||||||||||||
Sbjct: 528 ggtcttgatgcgctccacgg 509
to top
>gb|M14164.1|HS1GBICP HSV1 (strain F) gB and ICP18.5 genes encoding glycoprotein B, and a
            processing and transport protein, complete cds
          Length = 6098

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 4384 ggtcttgatgcgctccacgg 4365
to top
>gb|K01760.1|HS1GB HSV1 (KOS) glycoprotein B gene, complete cds
          Length = 3758

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 2038 ggtcttgatgcgctccacgg 2019
to top
>gb|M21629.1|HS1GLYB Herpes simplex virus type 1 glycoprotein B gene (gB-1), complete cds
          Length = 9756

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  ggtcttgatgcgctccacgg 400
            ||||||||||||||||||||
Sbjct: 8042 ggtcttgatgcgctccacgg 8023


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,289,462
Number of Sequences: 3902068
Number of extensions: 3289462
Number of successful extensions: 59413
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59157
Number of HSP's gapped (non-prelim): 255
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top