Clone Name | rbastl15c02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 Score = 99.6 bits (50), Expect = 7e-18 Identities = 62/66 (93%) Strand = Plus / Minus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 3111 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 3052 Query: 399 agtctt 404 ||||| Sbjct: 3051 ggtctt 3046
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 99.6 bits (50), Expect = 7e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 10020837 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 10020896 Query: 399 agtctt 404 ||||| Sbjct: 10020897 ggtctt 10020902
>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 99.6 bits (50), Expect = 7e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 101119 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 101178 Query: 399 agtctt 404 ||||| Sbjct: 101179 ggtctt 101184
>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0021A04 Length = 50487 Score = 99.6 bits (50), Expect = 7e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 48394 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 48453 Query: 399 agtctt 404 ||||| Sbjct: 48454 ggtctt 48459
>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0036E02 Length = 145931 Score = 99.6 bits (50), Expect = 7e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 115330 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 115389 Query: 399 agtctt 404 ||||| Sbjct: 115390 ggtctt 115395
>gb|AY103740.1| Zea mays PCO120652 mRNA sequence Length = 1013 Score = 83.8 bits (42), Expect = 4e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 631 ttaactgccacccttctgcttgagagtaatcttgtcacctaagctgagtgcaattccctg 572 Query: 399 agtctt 404 ||||| Sbjct: 571 ggtctt 566
>gb|AY109245.1| Zea mays PCO147899 mRNA sequence Length = 751 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 344 tgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtct 403 ||||||||||||| || ||||| ||||||||||| |||||||| ||||||||||| |||| Sbjct: 711 tgcctcccttctgttttagggtgatcttgtctcctaagctgagcgcaattccttgggtct 652 Query: 404 t 404 | Sbjct: 651 t 651
>gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence Length = 1032 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 339 ttaactgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttg 398 ||||||||| || ||||||||||| || |||||||| || ||||||||||||||||| || Sbjct: 638 ttaactgccacctttctgcttgagagtgatcttgtcccctaagctgagtgcaattccctg 579 Query: 399 agtctt 404 ||||| Sbjct: 578 ggtctt 573
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 16550 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 16609 Query: 403 tt 404 || Sbjct: 16610 tt 16611
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 166015 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 166074 Query: 403 tt 404 || Sbjct: 166075 tt 166076
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 3648878 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3648937 Query: 403 tt 404 || Sbjct: 3648938 tt 3648939
>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full insert sequence Length = 3332 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909 Query: 403 tt 404 || Sbjct: 2908 tt 2907
>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full insert sequence Length = 3332 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909 Query: 403 tt 404 || Sbjct: 2908 tt 2907
>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full insert sequence Length = 3363 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 2999 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2940 Query: 403 tt 404 || Sbjct: 2939 tt 2938
>dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F11, full insert sequence Length = 1741 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 1377 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 1318 Query: 403 tt 404 || Sbjct: 1317 tt 1316
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 343 ctgcctcccttctgcttgagggtaatcttgtctcccaagctgagtgcaattccttgagtc 402 |||||||||||||| |||||||| |||||||| || |||||||| || |||||||| ||| Sbjct: 3657572 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3657631 Query: 403 tt 404 || Sbjct: 3657632 tt 3657633
>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete sequence Length = 91755 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 304 ctacatgacacaattgcaacagattg 329 |||||||| ||||||||||||||||| Sbjct: 20673 ctacatgagacaattgcaacagattg 20648
>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains the SNAP91 gene for synaptosomal-associated protein, 91 kD homolog (mouse) (KIAA0656) and a CpG island, complete sequence Length = 167018 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 aatcttttgtacattataaaaa 251 |||||||||||||||||||||| Sbjct: 106168 aatcttttgtacattataaaaa 106189
>gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 129 of 218 of the complete genome Length = 11901 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttttttgtcaaaaaaggcct 113 ||||||||||||||||||||| Sbjct: 4932 gttttttgtcaaaaaaggcct 4912
>gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 51315 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcttctcatccctctctttaa 231 ||||||||||||||||||||| Sbjct: 29023 tcttctcatccctctctttaa 29043
>gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence Length = 39112 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 cgaaatacagtatctcaatcc 54 ||||||||||||||||||||| Sbjct: 5828 cgaaatacagtatctcaatcc 5808
>emb|AL691496.13| Mouse DNA sequence from clone RP23-6H1 on chromosome 4 Contains the 3' end of a novel gene, the Ambp gene for alpha 1 microglobulin/bikunin, the Kif12 gene for kinesin family member 12, the 5' end of the Col27a1 gene for procollagen type XXVII alpha 1 and a CpG island, complete sequence Length = 162062 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 accttcctcttctcatccctctctt 228 |||||||||||||||| |||||||| Sbjct: 24399 accttcctcttctcattcctctctt 24423
>gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, complete sequence Length = 169579 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 cctcttctcatccctctcttt 229 ||||||||||||||||||||| Sbjct: 41686 cctcttctcatccctctcttt 41706
>gb|AF034692.1|AF034692 Mus musculus alpha-1-microglobulin/bikunin precursor (AMBP) gene, complete cds, and LLRep3 pseudogene, partial sequence Length = 11287 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 204 accttcctcttctcatccctctctt 228 |||||||||||||||| |||||||| Sbjct: 3384 accttcctcttctcattcctctctt 3360
>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence Length = 204424 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 atgacacaattgcaacagatt 328 ||||||||||||||||||||| Sbjct: 73824 atgacacaattgcaacagatt 73844
>gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, complete cds Length = 987 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 atggaagggagttgggagag 137 |||||||||||||||||||| Sbjct: 98 atggaagggagttgggagag 117
>ref|XM_954078.1| Neurospora crassa OR74A hypothetical protein (NCU09227.1) partial mRNA Length = 2142 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 gaccttcctcttctcatccctctc 226 ||||||||||||||||||| |||| Sbjct: 1401 gaccttcctcttctcatccttctc 1378
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 atcttttgtacattataaaa 250 |||||||||||||||||||| Sbjct: 157323 atcttttgtacattataaaa 157304
>ref|XM_331618.1| Neurospora crassa OR74A hypothetical protein (NCU09227.1) partial mRNA Length = 2142 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 gaccttcctcttctcatccctctc 226 ||||||||||||||||||| |||| Sbjct: 1401 gaccttcctcttctcatccttctc 1378
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 atcttttgtacattataaaa 250 |||||||||||||||||||| Sbjct: 28118 atcttttgtacattataaaa 28099
>ref|XM_754415.1| Ustilago maydis 521 hypothetical protein (UM03361.1) partial mRNA Length = 2949 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gtaatcttgtctcccaagct 383 |||||||||||||||||||| Sbjct: 2918 gtaatcttgtctcccaagct 2899
>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete sequence Length = 135495 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gtacattataaaaacatctt 257 |||||||||||||||||||| Sbjct: 118337 gtacattataaaaacatctt 118318
>gb|AC063955.20| Homo sapiens 3 BAC RP11-441M10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 201692 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ccttcctcttctcatccctctctt 228 ||||||||||||| |||||||||| Sbjct: 95990 ccttcctcttctcttccctctctt 95967
>gb|BC048021.1| Xenopus laevis enzymatic glycosylation-regulating gene, mRNA (cDNA clone MGC:52826 IMAGE:4884583), complete cds Length = 3336 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ttttgtacattataaaaaca 253 |||||||||||||||||||| Sbjct: 3216 ttttgtacattataaaaaca 3235
>ref|XM_737168.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000048.02.0) partial mRNA Length = 1161 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 aatcttttgtacattataaaaaca 253 |||||||||||||||| ||||||| Sbjct: 324 aatcttttgtacattagaaaaaca 347
>emb|AL356414.11| Human DNA sequence from clone RP11-352D3 on chromosome 20 Contains the RPL21P2 gene for ribosomal protein L21 pseudogene 2 and a novel gene, complete sequence Length = 72540 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tgtctcccaagctgagtgca 390 |||||||||||||||||||| Sbjct: 6689 tgtctcccaagctgagtgca 6670
>gb|AC068770.11| Homo sapiens 3 BAC RP11-448L9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160644 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ccttcctcttctcatccctctctt 228 ||||||||||||| |||||||||| Sbjct: 458 ccttcctcttctcttccctctctt 435
>emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 in linkage group 10, complete sequence Length = 167771 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 atggaagggagttgggagag 137 |||||||||||||||||||| Sbjct: 2324 atggaagggagttgggagag 2343
>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence Length = 101116 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cttcctcttctcatccctct 225 |||||||||||||||||||| Sbjct: 82775 cttcctcttctcatccctct 82794
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gccaacacaaacttcacgtc 77 |||||||||||||||||||| Sbjct: 2470069 gccaacacaaacttcacgtc 2470050
>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cttcctcttctcatccctct 225 |||||||||||||||||||| Sbjct: 7997 cttcctcttctcatccctct 8016
>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence Length = 168843 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccttctgcttgagggtaat 368 |||||||||||||||||||| Sbjct: 29210 cccttctgcttgagggtaat 29229
>ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA Length = 987 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 atggaagggagttgggagag 137 |||||||||||||||||||| Sbjct: 98 atggaagggagttgggagag 117
>gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone MGC:110381 IMAGE:7410517), complete cds Length = 968 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 atggaagggagttgggagag 137 |||||||||||||||||||| Sbjct: 81 atggaagggagttgggagag 100
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 atcttttgtacattataaaa 250 |||||||||||||||||||| Sbjct: 17897369 atcttttgtacattataaaa 17897350
>gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete sequence Length = 89352 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ctcccttctgcttgagggta 366 |||||||||||||||||||| Sbjct: 72452 ctcccttctgcttgagggta 72433
>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete sequence Length = 97756 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 aatcttttgtacattataaa 249 |||||||||||||||||||| Sbjct: 6181 aatcttttgtacattataaa 6162
>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence Length = 240928 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gtacattataaaaacatctt 257 |||||||||||||||||||| Sbjct: 72225 gtacattataaaaacatctt 72206
>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence Length = 185588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccttctgcttgagggtaat 368 |||||||||||||||||||| Sbjct: 134566 cccttctgcttgagggtaat 134585
>dbj|AP006212.1| Homo sapiens genomic DNA, chromosome 20, clone:CTB-271B20, complete sequence Length = 129610 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tgtctcccaagctgagtgca 390 |||||||||||||||||||| Sbjct: 44905 tgtctcccaagctgagtgca 44886
>emb|AL132857.4|CNS01DTS Human chromosome 14 DNA sequence BAC R-896J10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166862 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 tttgtacattataaaaacatcttt 258 ||||||||||||||||||| |||| Sbjct: 106494 tttgtacattataaaaacaacttt 106517
>dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 8/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccttctgcttgagggtaat 368 |||||||||||||||||||| Sbjct: 911 cccttctgcttgagggtaat 892 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,822,895 Number of Sequences: 3902068 Number of extensions: 3822895 Number of successful extensions: 75615 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75440 Number of HSP's gapped (non-prelim): 175 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)