>CCG1_MOUSE (O70578) Voltage-dependent calcium channel gamma-1 subunit|
           (Dihydropyridine-sensitive L-type, skeletal muscle
           calcium channel gamma subunit)
          Length = 223

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 239 IKHYINWSAACKLTSIHLVSKGILLLVRFSI 147
           I+HY +WS AC   +  L+  G L L+ FS+
Sbjct: 175 IEHYYSWSFACACAAFILLFLGGLFLLLFSL 205

>ADA2B_CAVPO (Q60475) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor)
          Length = 448

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
 Frame = +1

Query: 157 LTSRRIPFDTKWMLVNLQAADQLM*CLIL--------------WKIFCR*LFYVSTMVQG 294
           LTSR +P      LV+L AAD L+  LI+              W+ +C    Y++  V  
Sbjct: 38  LTSRSLPAPQNLFLVSLAAADILVATLIIPFSLANELLGYWYFWRTWCE--VYLALDVLF 95

Query: 295 CTCSLV 312
           CT S+V
Sbjct: 96  CTSSIV 101

>NHR77_CAEEL (O02316) Nuclear hormone receptor family member nhr-77|
          Length = 362

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 103 CGFLQYPENVIFHLRGLLIKYCASFF 26
           C   ++P NV  H  GL+   CA+FF
Sbjct: 11  CPVCEFPSNVELHFGGLVCGACAAFF 36

>NH174_CAEEL (O17748) Nuclear hormone receptor family member nhr-174|
          Length = 382

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 103 CGFLQYPENVIFHLRGLLIKYCASFF 26
           C   ++P NV  H  GL+   CA+FF
Sbjct: 65  CPVCEFPSNVELHFGGLVCGACAAFF 90

>GPC6A_CARAU (Q9PW88) G-protein coupled receptor family C group 6 member A|
           precursor (Odorant receptor 5.24)
          Length = 877

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 269 NSHLQKIFHNIKHYINWSAACKLTSIHLVSKGILLLVRFSIGFY 138
           N++  K +     Y  W++   +  + L + GILLL+  S  F+
Sbjct: 546 NANSSKCYPKFYEYFEWNSGFAIALLTLAALGILLLISMSALFF 589

>SYV_UREPA (Q9PQM4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 874

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 260 DDCFMYQLWYRDALAAWWRQPHNMIFC 340
           D C   QLW+   +  W+ +  N I+C
Sbjct: 404 DWCISRQLWWGHQIPVWYHKKTNQIYC 430

>FSHP1_RAT (Q63517) Follicle-stimulating hormone primary response protein (FSH|
           primary response protein 1) (Leucine-rich primary
           response protein 1)
          Length = 745

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -2

Query: 314 STKLQVHPCT---IVDT*NSHLQKIFHNIKHYINWSAACKLTSIHLVSKGILLLVRFSIG 144
           ST+ QV P T   +  T    +  +   I+ YI W +   + +I L S   LL V F + 
Sbjct: 503 STEAQVQPMTDSPLETTLGGSMDSVSQLIE-YIGWLS---MVAIRLESSSTLL-VHFILD 557

Query: 143 FYSPACASFLN 111
           FY   C  ++N
Sbjct: 558 FYEKVCDIYIN 568

>GRK_DROME (P42287) Protein gurken precursor|
          Length = 295

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -2

Query: 350 TIIYRKSCCVAASTKLQVHPCTIVDT*NSHLQKIFHNIKHYINWSAACKLTSIHLVSK 177
           TI+    CC +    L+ H   IV   +SH+ +  H ++  I  +A   L  + L  K
Sbjct: 18  TIVAVTDCCSSRILLLREHTLKIVQHQHSHMHEHAHELQQQIQETAVELLNRLELQRK 75

>UL31_HHV6U (P28865) Protein U37|
          Length = 264

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +3

Query: 225 NVMLDIVEDFL*MTVLC--INYGTGMHLQLG 311
           NV LDI+++ + +TVLC  ++  T +H+ +G
Sbjct: 204 NVYLDILQESVILTVLCETLDTNTNIHIDIG 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,173,815
Number of Sequences: 219361
Number of extensions: 999269
Number of successful extensions: 1713
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)