Clone Name | rbastl15b03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence Length = 110038 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 tttgtttgcatttacgtttgcgtttc 117 ||||||||||||||| |||||||||| Sbjct: 46436 tttgtttgcatttacatttgcgtttc 46411
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 taccgtttacagtaacaccgt 89 ||||||||||||||||||||| Sbjct: 615110 taccgtttacagtaacaccgt 615090
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 taccgtttacagtaacaccgt 89 ||||||||||||||||||||| Sbjct: 615153 taccgtttacagtaacaccgt 615133
>gb|AC007696.5|AC007696 Drosophila melanogaster, chromosome 2L, region 28B, BAC clone BACR14I17, complete sequence Length = 157948 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gtttgcatttacgtttgcgtttcat 119 ||||||||| ||||||||||||||| Sbjct: 145441 gtttgcattcacgtttgcgtttcat 145465
>gb|AE003620.3| Drosophila melanogaster chromosome 2L, section 29 of 83 of the complete sequence Length = 251142 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gtttgcatttacgtttgcgtttcat 119 ||||||||| ||||||||||||||| Sbjct: 123173 gtttgcattcacgtttgcgtttcat 123197
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 taccgtttacagtaacaccgt 89 ||||||||||||||||||||| Sbjct: 615110 taccgtttacagtaacaccgt 615090
>gb|AC004532.1|AC004532 Drosophila melanogaster DNA sequence (P1s DS03465 (D149) and DS08544 (D187)), complete sequence Length = 90736 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 gtttgcatttacgtttgcgtttcat 119 ||||||||| ||||||||||||||| Sbjct: 42457 gtttgcattcacgtttgcgtttcat 42481
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tacagtaacaccgtcatttg 95 |||||||||||||||||||| Sbjct: 776397 tacagtaacaccgtcatttg 776378
>gb|AC149293.21| Medicago truncatula clone mth2-78c5, complete sequence Length = 111412 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtttcattttttgacacaaa 132 |||||||||||||||||||| Sbjct: 106879 gtttcattttttgacacaaa 106898
>gb|AC147780.10| Medicago truncatula clone mth2-36n9, complete sequence Length = 102831 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtttcattttttgacacaaa 132 |||||||||||||||||||| Sbjct: 70316 gtttcattttttgacacaaa 70335
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttaatgttacacttcagaaa 46 |||||||||||||||||||| Sbjct: 7156 ttaatgttacacttcagaaa 7137
>ref|XM_696273.1| PREDICTED: Danio rerio similar to doublecortin and CaM kinase-like 2 (LOC572548), mRNA Length = 1348 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ttaatgttacacttcagaaa 46 |||||||||||||||||||| Sbjct: 1250 ttaatgttacacttcagaaa 1269
>emb|BX890609.7| Zebrafish DNA sequence from clone DKEY-56E5, complete sequence Length = 228713 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gtttgcgtttcattttttgacaca 130 ||||||||||||| |||||||||| Sbjct: 45814 gtttgcgtttcatattttgacaca 45791
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cgtcatttgtttgcatttacgttt 110 |||||||||||| ||||||||||| Sbjct: 112114 cgtcatttgtttccatttacgttt 112091
>dbj|AK015671.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930500N06 product:hypothetical protein, full insert sequence Length = 847 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 acacgtccttaatacagagacaaaacct 159 ||||||| ||||||||||||||||||| Sbjct: 219 acacgtcgataatacagagacaaaacct 246
>gb|AY109011.1| Zea mays PCO078615 mRNA sequence Length = 1368 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tgcattccatatcaaagcaa 219 |||||||||||||||||||| Sbjct: 548 tgcattccatatcaaagcaa 529
>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete sequence Length = 306696 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cgtcatttgtttgcatttacgttt 110 |||||||||||| ||||||||||| Sbjct: 184985 cgtcatttgtttccatttacgttt 184962
>gb|AC132574.3| Mus musculus BAC clone RP24-421H8 from 1, complete sequence Length = 173036 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 caaacttcagctccacctgc 281 |||||||||||||||||||| Sbjct: 126753 caaacttcagctccacctgc 126772
>gb|AC003121.1|AC003121 Drosophila melanogaster (P1 DS00329 (D89)) DNA sequence, complete sequence Length = 69822 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgtcatttgtttgcatttacgttt 110 |||||||||||| ||||||||||| Sbjct: 26873 cgtcatttgtttccatttacgttt 26896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,911,934 Number of Sequences: 3902068 Number of extensions: 2911934 Number of successful extensions: 49854 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49755 Number of HSP's gapped (non-prelim): 99 length of query: 327 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 305 effective length of database: 17,147,199,772 effective search space: 5229895930460 effective search space used: 5229895930460 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)