Clone Name | rbastl15b01 |
---|---|
Clone Library Name | barley_pub |
>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex| component Sec8) Length = 1053 Score = 51.6 bits (122), Expect = 5e-07 Identities = 22/41 (53%), Positives = 31/41 (75%) Frame = -1 Query: 373 FIAEQEYLFSAKEYLSILKVNVPGREIPMDAERRISQILGH 251 FIAE + +F+ EY ++LKVNVPGR+ P DA+ R+ +IL H Sbjct: 1013 FIAEHDQMFTPTEYSNLLKVNVPGRDTPSDAQSRLLEILSH 1053
>Y13L_BPT4 (P39505) Hypothetical 9.4 kDa protein in nrdB-nrdA intergenic| region Length = 83 Score = 35.0 bits (79), Expect = 0.044 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = +2 Query: 5 LGKLHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKES 184 +G L+P Y T + ++ + T +L+S+R + P C H KK N+ N + + Y + Sbjct: 18 VGVLNPMYGTISPTRDVPHTKETRDLISLRTKQGAEYPPCPHCGKKVNKGNALRWHYDKC 77 Query: 185 R 187 + Sbjct: 78 K 78
>SYI_BUCBP (Q89AU9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 939 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Frame = +2 Query: 2 FLGKLHPKYHT---FTRIKNKRSIQNTTNLLSMRQQIVHYLPIC-RHQKKKPNRNNK--- 160 FL +HPK + F IK + N N L +++VH P C RH+ +R + Sbjct: 363 FLNNIHPKLNNINIFKSIKIVIKLLNNNNALLHSEKLVHSYPYCWRHKTPIISRATQQWF 422 Query: 161 INYSYKESRGR 193 IN ++ R R Sbjct: 423 ININHNNLRNR 433
>WNT4_DROME (P40589) Protein Wnt-4 precursor (dWnt-4)| Length = 539 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +2 Query: 32 TFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGRYC 199 T R K +I+ N SMRQ + + ++KKP ++ Y E+ YC Sbjct: 423 TLLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYC 478
>SELD_DICDI (Q94497) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) (Fragment) Length = 370 Score = 27.7 bits (60), Expect = 7.1 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +2 Query: 29 HTFTRIKNKRSIQNTTNL-----LSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGR 193 H T + + ++TNL L +R +I H LPI +H KK + +N+ +K +G Sbjct: 275 HAATDVTGFGILGHSTNLAQNQLLPIRFEI-HTLPIIKHMKK---LEDHLNHPFKLLKGT 330 Query: 194 YCETS 208 ETS Sbjct: 331 SAETS 335
>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 2339 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 Query: 59 SIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKIN 166 SI ++ LLS + +I YLP +HQ K N NN N Sbjct: 1042 SISSSHLLLSYKNKIP-YLPHVQHQNKTSNMNNIYN 1076
>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1427 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = +2 Query: 11 KLHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESR- 187 K P YH +KNK ++N L+S H KKP + Y+E Sbjct: 597 KKSPTYHVIILVKNKIGLKNLYKLISESH--------LNHFYKKPRMPKSLINKYREGLM 648 Query: 188 -GRYCE 202 G CE Sbjct: 649 IGSACE 654 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,530,950 Number of Sequences: 219361 Number of extensions: 735542 Number of successful extensions: 1644 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1625 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1642 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)