>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 25  RLTVISQNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 150
           +L  + +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 30  QLLKLKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 149  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 57
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349

>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = +3

Query: 183 KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 317
           K SH+       T+E KK    F PGSS+S    +    S+ S +PP   +HS
Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485

>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2|
           (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 199 VKWDVFVSPPMLLFLFSSYTI 137
           ++W VF  PPM ++L +SY I
Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261

>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III|
          Length = 577

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 235 PGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTI 137
           P  + G  + S   W  F  PPM+ ++FSS+ I
Sbjct: 246 PNEDHGISYLS---WMAFAIPPMIFYMFSSWFI 275

>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 330 LRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 205
           L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 419 LKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457

>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 330 LRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 205
           L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 419 LKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457

>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 330 LRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 205
           L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 419 LKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457

>RBL2_MAGMG (Q8RTI2) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 459

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -3

Query: 271 GLSATAA*LLLEPGNEQGFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSIL 104
           G +  A+ L L  GN QG     + K + F  PP  L LF       N+   W +L
Sbjct: 97  GKAMIASFLTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPAC--NISHMWKVL 150

>YAF7_CAEEL (P52883) Hypothetical protein F46C5.7|
          Length = 199

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
 Frame = -1

Query: 216 FFFLLLSNGMFLCLLQCYYFFSVL------------TQFVTMYCGFGVFCRLQYIVSAL* 73
           FF +++++ +F+ L   +YF SV               F++M C   V   + +  S   
Sbjct: 60  FFLMIIASFVFVLLYLEFYFGSVYNCPALLHLHTLSAAFMSMVCWLSVLIPIFFGESIYI 119

Query: 72  ESKTESKIILAYY-CQPHFSVLMVS 1
            S+  + +I  YY CQ  F  L+ +
Sbjct: 120 ASRYVAHVIYKYYGCQVIFGSLLTT 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,889,984
Number of Sequences: 219361
Number of extensions: 910553
Number of successful extensions: 2625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2625
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)