ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl15a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 309 3e-81
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 303 2e-79
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
8gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se... 46 0.071
9gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s... 46 0.071
10emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 i... 44 0.28
11emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5... 44 0.28
12emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ... 42 1.1
13emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr... 42 1.1
14gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, compl... 42 1.1
15gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N... 42 1.1
16emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu... 42 1.1
17gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence 40 4.4
18gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 4.4
19gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com... 40 4.4
20gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome... 40 4.4
21gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 4.4
22gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome... 40 4.4
23gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 40 4.4
24emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch... 40 4.4
25emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr... 40 4.4
26gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 4.4
27emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 4.4
28emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo... 40 4.4
29emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 4.4
30emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 4.4
31emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 4.4
32gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp... 40 4.4
33gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, co... 40 4.4
34dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 4.4
35gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c... 40 4.4
36gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, ... 40 4.4
37dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 40 4.4
38emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 4.4
39emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 4.4
40emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 4.4
41emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ... 40 4.4
42emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 40 4.4
43emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 4.4
44gb|AY110434.1| Zea mays CL533_2 mRNA sequence 40 4.4
45emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr... 40 4.4
46emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 4.4
47gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete... 40 4.4
48emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 40 4.4
49gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 4.4 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  309 bits (156), Expect = 3e-81
 Identities = 159/160 (99%)
 Strand = Plus / Minus

                                                                        
Query: 39   aagccaaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgta 98
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804

                                                                        
Query: 99   accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744

                                                    
Query: 159  aataataacattggaggagacacaaaaacatcccatttga 198
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704



 Score =  163 bits (82), Expect = 4e-37
 Identities = 108/114 (94%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                        
Query: 218  gccttgttcattcccaggctccagcaagagttaggccgccgtcgcc-gagagaccaaaat 276
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagacc-aaat 2635

                                                                  
Query: 277  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaa 330
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaa 2581
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  303 bits (153), Expect = 2e-79
 Identities = 153/153 (100%)
 Strand = Plus / Minus

                                                                        
Query: 44   aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803

                                                                        
Query: 104  cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743

                                             
Query: 164  taacattggaggagacacaaaaacatcccattt 196
            |||||||||||||||||||||||||||||||||
Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710



 Score =  200 bits (101), Expect = 2e-48
 Identities = 110/113 (97%)
 Strand = Plus / Minus

                                                                        
Query: 218  gccttgttcattcccaggctccagcaagagttaggccgccgtcgccgagagaccaaaatc 277
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                 
Query: 278  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaa 330
            |||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaa 2584
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 82    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 140
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 141   gtgtaagaactgaaaagaaataataa 166
             ||||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 271   caaaatccatggcttcttcctttcct 296
             |||||||||||||||||| |||||||
Sbjct: 42261 caaaatccatggcttctttctttcct 42286
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 82       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 140
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 141      gtgtaagaactgaaaagaaataataa 166
                ||||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 271      caaaatccatggcttcttcctttcct 296
                |||||||||||||||||| |||||||
Sbjct: 24921676 caaaatccatggcttctttctttcct 24921701
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 82   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 140
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 141  gtgtaagaactgaaaagaaataataa 166
            ||||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 271  caaaatccatggcttcttcctttcct 296
            |||||||||||||||||| |||||||
Sbjct: 2639 caaaatccatggcttctttctttcct 2614
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 82   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 140
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 141  gtgtaagaactgaaaagaaataataa 166
            ||||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 271  caaaatccatggcttcttcctttcct 296
            |||||||||||||||||| |||||||
Sbjct: 1545 caaaatccatggcttctttctttcct 1520
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 82    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 140
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 141   gtgtaagaactgaaaagaaataataa 166
             ||||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 271   caaaatccatggcttcttcctttcct 296
             |||||||||||||||||| |||||||
Sbjct: 49790 caaaatccatggcttctttctttcct 49815
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>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 181   caaaaacatcccatttgacagaagaag 207
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842
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>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 181   caaaaacatcccatttgacagaagaag 207
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337
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>emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 in linkage group 8,
             complete sequence
          Length = 150519

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    aaataatcttagattcagtttt 66
             ||||||||||||||||||||||
Sbjct: 27178 aaataatcttagattcagtttt 27199
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>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  aagaactgaaaagaaataataacatt 170
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204
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>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 73     ctacaatgctgacacgatatattgt 97
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
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>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   tcccaggctccagcaagagtt 249
             |||||||||||||||||||||
Sbjct: 87107 tcccaggctccagcaagagtt 87087
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>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence
          Length = 67124

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 229  tcccaggctccagcaagagtt 249
            |||||||||||||||||||||
Sbjct: 3598 tcccaggctccagcaagagtt 3618
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>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence
          Length = 83029

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   tcccaggctccagcaagagtt 249
             |||||||||||||||||||||
Sbjct: 34025 tcccaggctccagcaagagtt 34005
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>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 272  aaaatccatggcttcttcctttcct 296
            ||||||||||||||||| |||||||
Sbjct: 2599 aaaatccatggcttctttctttcct 2575
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>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 aaaatccatggcttcttcctttcc 295
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   gaaaagaaataataacattg 171
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342
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>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aaattgtgtaagaactgaaa 155
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504
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>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ccatggcttcttcctttcct 296
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503
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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 132    ttacaaattgtgtaagaactgaaaagaaataa 163
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665
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>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence
          Length = 190023

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   cccaggctccagcaagagtt 249
             ||||||||||||||||||||
Sbjct: 97827 cccaggctccagcaagagtt 97808
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   tgaaaagaaataataacatt 170
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844
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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
           sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 139 ttgtgtaagaactgaaaagaaata 162
           |||||||||||||||||| |||||
Sbjct: 55  ttgtgtaagaactgaaaaaaaata 32
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>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 139    ttgtgtaagaactgaaaagaaata 162
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   tgaaaagaaataataacatt 170
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
             Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes
             and two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ttcattcccaggctccagca 243
             ||||||||||||||||||||
Sbjct: 35935 ttcattcccaggctccagca 35916
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>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 taagaactgaaaagaaataa 163
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgacacgatatattgt 97
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgacacgatatattgt 97
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   tgaaaagaaataataacatt 170
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763
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>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   acaaattgtgtaagaactga 153
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382
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>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ttgttcattcccaggctcca 240
             ||||||||||||||||||||
Sbjct: 70836 ttgttcattcccaggctcca 70817
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>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130097D18
           product:unclassifiable, full insert sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 cccaggctccagcaagagtt 249
           ||||||||||||||||||||
Sbjct: 28  cccaggctccagcaagagtt 9
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>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 141  gtgtaagaactgaaaagaaa 160
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855
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>gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, complete sequence
          Length = 62355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aagccaaaataatcttagat 58
             ||||||||||||||||||||
Sbjct: 14713 aagccaaaataatcttagat 14732
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    taagaactgaaaagaaataataac 167
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   gaaaagaaataataacattg 171
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810
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>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgacacgatatattgt 97
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgacacgatatattgt 97
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824
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>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 tgaaaagaaataataacatt 170
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgacacgatatattgt 97
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgacacgatatattgt 97
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971
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>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 272 aaaatccatggcttcttcctttcc 295
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649
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>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  aaatccatggcttcttcctttcct 296
            |||||||||||||||| |||||||
Sbjct: 2699 aaatccatggcttctttctttcct 2676
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>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   taacattggaggagacacaaaaac 187
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116
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>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   ttcccaggctccagcaagag 247
             ||||||||||||||||||||
Sbjct: 42008 ttcccaggctccagcaagag 41989
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgacacgatatattgt 97
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  gaaaagaaataataacattg 171
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,882,227
Number of Sequences: 3902068
Number of extensions: 3882227
Number of successful extensions: 88920
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88784
Number of HSP's gapped (non-prelim): 130
length of query: 330
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 308
effective length of database: 17,147,199,772
effective search space: 5281337529776
effective search space used: 5281337529776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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