ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl15a09 |
|---|---|
| Clone Library Name | barley_pub |
>HUNB_DROVI (P13361) Protein hunchback| Length = 816 Score = 31.2 bits (69), Expect = 0.66 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = +3 Query: 96 VFTLQVDIDHLNYHHIEESCGHHDEHNRDETGL-----HPVPPTLPP 221 +F + + L++HH HHD H+ +G P+P +PP Sbjct: 23 MFAANIKQEPLSHHHHHHGQQHHDNHSNSNSGASSPRQSPLPSPIPP 69
>FA8_PIG (P12263) Coagulation factor VIII precursor (Procoagulant component)| Length = 2133 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/67 (25%), Positives = 29/67 (43%) Frame = -2 Query: 273 HHKGGCGSYIRALSSGREEGVLEEPDEDQFHRDYAHRDDRSSLLCDGSLDDRYRLVM*RQ 94 HH GG +++R S E + + DE++ + D + D + DG DD + R Sbjct: 335 HHHGGMEAHVRVESCAEEPQLRRKADEEEDYDDNLYDSDMDVVRLDG--DDVSPFIQIRS 392 Query: 93 TCYSRPR 73 P+ Sbjct: 393 VAKKHPK 399
>DGTP_SHIFL (Q83MD6) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +FT++ YHH+ E+ G H++ Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303
>DGTP_ESCFE (Q59435) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +FT++ YHH+ E+ G H++ Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303
>DGTP_ECOLI (P15723) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +FT++ YHH+ E+ G H++ Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303
>DGTP_ECOL6 (Q8FL13) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +FT++ YHH+ E+ G H++ Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303
>DGTP_ECO57 (Q8X8Y9) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +FT++ YHH+ E+ G H++ Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303
>Y211_PASMU (Q9CP49) UPF0276 protein PM0211| Length = 307 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 87 NKFVFTLQVDIDHLNYHHIEESCGHHDEHNRDETGLHPVPPT 212 N +VF VD+ +NY HI GH +EH +P+ P+ Sbjct: 187 NPYVFLDHVDVSRVNYIHI---AGHDEEHG----AANPISPS 221
>DGTP_SHIBO (Q59827) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K ++TL+ YHH+ ++ G H++ Sbjct: 273 VADLEDAVEKRIYTLE-----QLYHHLHDAWGQHEK 303
>DGTP_SALTI (Q8Z9B1) Deoxyguanosinetriphosphate triphosphohydrolase (EC| 3.1.5.1) (dGTPase) (dGTP triphosphohydrolase) Length = 504 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +3 Query: 63 ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 170 + +LEDA K +F+++ YHH+ + GHH++ Sbjct: 273 VADLEDAVEKRIFSVEQ-----LYHHLYHAWGHHEK 303
>Y1600_HAEIN (P44268) UPF0276 protein HI1600| Length = 307 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 93 FVFTLQVDIDHLNYHHIEESCGHHDEHN 176 ++F QVD+ +NY HI GH +EH+ Sbjct: 189 YIFLDQVDVKRVNYIHI---AGHDEEHS 213
>YACH_ECOLI (P36682) Hypothetical protein yacH| Length = 617 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +3 Query: 114 DIDHLNYHHIEESCGHHDEHNRDETG 191 D DH ++HH + HHD +RD G Sbjct: 305 DDDHDHHHHDNDDYHHHDGGHRDGNG 330
>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21| Length = 344 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -2 Query: 243 RALSSGREEGVLEEPDEDQFHRDYAHRDDR 154 R+LS R PD D++ Y RD+R Sbjct: 314 RSLSRSRSRSYSRSPDRDRYREKYRDRDNR 343
>PURP_CHICK (P08938) Purpurin precursor| Length = 196 Score = 27.3 bits (59), Expect = 9.5 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -2 Query: 261 GCGSYIRALSSGREEGVLEEPDEDQFHRDYAHRDDRSSLLCDGSLDDRYRLVM*R 97 G SY LSSG + + + D D + YA R SL DGS DD Y L+ R Sbjct: 114 GLASY---LSSGGDNYWVIDTDYDNYAITYACR----SLKEDGSCDDGYSLIFSR 161
>CSN12_NEUCR (Q7SD63) COP9 signalosome complex subunit 12| Length = 461 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +3 Query: 102 TLQVDIDHLNYHHIEESCGHHDEHNRDETGL 194 TL D+ I +SCGHHD N + G+ Sbjct: 23 TLSPDLPQQQLQAIWKSCGHHDAQNVIKRGI 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,164,396 Number of Sequences: 219361 Number of extensions: 811136 Number of successful extensions: 2630 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2484 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2598 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
