>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  422 bits (213), Expect = e-115
 Identities = 264/281 (93%)
 Strand = Plus / Minus

                                                                          
Query: 1      agtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttaga 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323484 agtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttaga 323425

                                                                          
Query: 61     acattacaaatctcgaggacgcgagtaacaagtttgtcttcacattacaagtcgatatcg 120
              ||||||||| ||||||   |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 323424 acattacaagtctcgaaaccgcgagtagcgagtttgtcttcacattacaagtcgatatcg 323365

                                                                          
Query: 121    atcatctaaactaccatcacatagaagagagctgcggtcatcacgatgagcataatcgcg 180
              |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||
Sbjct: 323364 atcatctaaactaccatcacatagaagagagtcgcggtcatcacgatgagcatcatcgcg 323305

                                                                          
Query: 181    atgaaactggtcttcatccggttcctccaacactccctcctctctcccgctagatagcgc 240
              ||||||||||||||||||| ||| ||||  | ||||||||||||||||||||||||||||
Sbjct: 323304 atgaaactggtcttcatccagtttctcctccgctccctcctctctcccgctagatagcgc 323245

                                                       
Query: 241    gcgtatataacttccgcatccgcccttgtggtgtacccttt 281
              |||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 323244 gcgtatctaacttccgcctccgccctagtggtgtacccttt 323204

>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score =  285 bits (144), Expect = 5e-74
 Identities = 247/282 (87%), Gaps = 12/282 (4%)
 Strand = Plus / Plus

                                                                          
Query: 1      agtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttaga 60
              |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||
Sbjct: 101051 agtctctgaatacaattcatcatattagtctccgaattgaaaagaccgaacaaagataga 101110

                                                                          
Query: 61     ac-----attacaaatctcgaggacgcgagtaacaagtttgtcttcacattacaagtcga 115
              ||     ||||||| |||||||  |||||||       ||||||||||||||||||||||
Sbjct: 101111 acattatattacaagtctcgagaccgcgagt-------ttgtcttcacattacaagtcga 101163

                                                                          
Query: 116    tatcgatcatctaaactaccatcacatagaagagagctgcggtcatcacgatgagcataa 175
              |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 101164 tatcgatcatctaaactatcatcacatagaagagagctgcggtcatcacgatgagcatca 101223

                                                                          
Query: 176    tcgcgatgaaactggtcttcatccggttcctccaacactccctcctctctcccgctagat 235
              || |||||||||| |||||||||||||||||||||  |||||||| ||||||||||||||
Sbjct: 101224 tcacgatgaaactcgtcttcatccggttcctccaatgctccctcccctctcccgctagat 101283

                                                        
Query: 236    agcgcgcgtatataacttccgcatccgcccttgtggtgtacc 277
              || | |||||| ||  ||| || || ||||| ||||||||||
Sbjct: 101284 agtgggcgtatctagattcggcctcggccctagtggtgtacc 101325

>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  234 bits (118), Expect = 2e-58
 Identities = 136/142 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    agtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttaga 60
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2079 agtctccgaatacaattcatcatattagtctctgaatttaaaataccgaacaaagttaga 2020

                                                                        
Query: 61   acattacaaatctcgaggacgcgagtaacaagtttgtcttcacattacaagtcgatatcg 120
            ||||||||| |||||||  |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 2019 acattacaagtctcgagaccgcgagtagcgagtttgtcttcacattacaagtcgatatcg 1960

                                  
Query: 121  atcatctaaactaccatcacat 142
            ||||||||||||||||||||||
Sbjct: 1959 atcatctaaactaccatcacat 1938



 Score =  182 bits (92), Expect = 5e-43
 Identities = 104/108 (96%)
 Strand = Plus / Minus

                                                                        
Query: 248  taacttccgcatccgcccttgtggtgtaccctttatactctgtccatcagaaagcttttg 307
            |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1923 taacttccgcctcctcccttgtggtgtaccctttgtactctgtccatcagaaagcttttg 1864

                                                            
Query: 308  actcacagagttatcatcactacttgtctgttgcaaatcttccttgcc 355
            ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 actcacagaattatcatcactacttgtctgttgcaaatcttccttgcc 1816



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  tcacattacaagtcgatatc 119
            ||||||||||||||||||||
Sbjct: 1943 tcacattacaagtcgatatc 1924

>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score =  123 bits (62), Expect = 4e-25
 Identities = 89/98 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1     agtctccgaatacaattcatcatattagtctccgaatttaaaataccgaacaaagttaga 60
             |||||||||||||||||||||||||||||||||||| | |||| ||||||||||| ||||
Sbjct: 15815 agtctccgaatacaattcatcatattagtctccgaaatcaaaagaccgaacaaagataga 15756

                                                   
Query: 61    acattacaaatctcgaggacgcgagtaacaagtttgtc 98
             ||||||||| |||||||  |||||||| | ||||||||
Sbjct: 15755 acattacaagtctcgagaccgcgagtagcgagtttgtc 15718



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 1     agtctccgaatacaattcatcatattagtctccgaat 37
             |||||| |||||||||||||||| |||||||||||||
Sbjct: 15841 agtctctgaatacaattcatcattttagtctccgaat 15805

>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence
          Length = 12483

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 118   tcgatcatctaaactaccatcacatagaagagag 151
             |||||||||| |||||||||||||||||||||||
Sbjct: 11780 tcgatcatctgaactaccatcacatagaagagag 11747



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                         
Query: 179   cgatgaaactggtcttcatccggttcctccaacactccctcctctctcccgctagatagc 238
             |||||||| ||||||||||| |||||||||  | |||| |||||||| |||| | || ||
Sbjct: 11722 cgatgaaagtggtcttcatctggttcctcctccgctccgtcctctctaccgccacatggc 11663

                                                        
Query: 239   gcgcgtatataacttccgcatccgcccttgtggtgtacccttt 281
             | |||||| |  |||| |  ||||| || ||||||||||||||
Sbjct: 11662 gtgcgtatctgtcttcggtctccgctctagtggtgtacccttt 11620

>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence
          Length = 161757

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   cactccctcctctctcccgct 231
             |||||||||||||||||||||
Sbjct: 65023 cactccctcctctctcccgct 65003

>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence
          Length = 174384

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    cactccctcctctctcccgct 231
              |||||||||||||||||||||
Sbjct: 161615 cactccctcctctctcccgct 161595

>gb|AC154379.2| Mus musculus BAC clone RP23-52B1 from chromosome 17, complete sequence
          Length = 234939

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    cttgtctgttgcaaatcttcc 350
              |||||||||||||||||||||
Sbjct: 195863 cttgtctgttgcaaatcttcc 195843

>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence
          Length = 162550

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   cttgtctgttgcaaatcttcc 350
             |||||||||||||||||||||
Sbjct: 16072 cttgtctgttgcaaatcttcc 16052

>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete
             sequence
          Length = 217148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 204   cctccaacactccctcctctctccc 228
             |||||||||||||| ||||||||||
Sbjct: 37673 cctccaacactcccacctctctccc 37649

>gb|AY147867.2| Acinetobacter sp. 4365 AdeD (adeD) and AdeE (adeE) genes, complete
            cds
          Length = 5420

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  ttacaagtcgatatcgatca 124
            ||||||||||||||||||||
Sbjct: 4053 ttacaagtcgatatcgatca 4072

>gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-246M15, complete
             sequence
          Length = 113092

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   aagcttttgactcacagagt 318
             ||||||||||||||||||||
Sbjct: 27693 aagcttttgactcacagagt 27712

>gb|AC112770.4| Homo sapiens 3 BAC RP11-686L6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187977

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    cttgtggtgtaccctttata 284
              ||||||||||||||||||||
Sbjct: 162157 cttgtggtgtaccctttata 162176

>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21,
             complete sequence
          Length = 168569

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   tctgttgcaaatcttccttg 353
             ||||||||||||||||||||
Sbjct: 11264 tctgttgcaaatcttccttg 11283

>emb|AL928625.5| Mouse DNA sequence from clone RP24-528P17 on chromosome 4, complete
              sequence
          Length = 170639

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    tggtgtaccctttatactct 288
              ||||||||||||||||||||
Sbjct: 136569 tggtgtaccctttatactct 136588

>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21,
             complete sequence
          Length = 179432

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   tctgttgcaaatcttccttg 353
             ||||||||||||||||||||
Sbjct: 47627 tctgttgcaaatcttccttg 47646

>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete
              sequence
          Length = 126842

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    ctccctcctctctcccgcta 232
              ||||||||||||||||||||
Sbjct: 113873 ctccctcctctctcccgcta 113854

>gb|AC072057.8| Homo sapiens BAC clone RP11-312C1 from 7, complete sequence
          Length = 140150

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   aacactccctcctctctccc 228
             ||||||||||||||||||||
Sbjct: 28783 aacactccctcctctctccc 28802

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 213     ctccctcctctctcccgcta 232
               ||||||||||||||||||||
Sbjct: 5553649 ctccctcctctctcccgcta 5553668

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 205      ctccaacactccctcctctctccc 228
                ||||||| ||||||||||||||||
Sbjct: 19837751 ctccaacgctccctcctctctccc 19837774

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 205      ctccaacactccctcctctctccc 228
                ||||||| ||||||||||||||||
Sbjct: 22267437 ctccaacgctccctcctctctccc 22267460

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    agtttgtcttcacattacaa 110
             ||||||||||||||||||||
Sbjct: 71889 agtttgtcttcacattacaa 71870

>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   ctccaacactccctcctctctccc 228
             ||||||| ||||||||||||||||
Sbjct: 26081 ctccaacgctccctcctctctccc 26104

>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 205  ctccaacactccctcctctctccc 228
            ||||||| ||||||||||||||||
Sbjct: 5929 ctccaacgctccctcctctctccc 5952

>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    ctccaacactccctcctctctccc 228
              ||||||| ||||||||||||||||
Sbjct: 166702 ctccaacgctccctcctctctccc 166725

>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   taaactaccatcacatagaa 146
             ||||||||||||||||||||
Sbjct: 36739 taaactaccatcacatagaa 36720

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 213     ctccctcctctctcccgcta 232
               ||||||||||||||||||||
Sbjct: 5554436 ctccctcctctctcccgcta 5554455

>gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, complete sequence
          Length = 190990

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tgactcacagagttatcatc 325
              ||||||||||||||||||||
Sbjct: 151661 tgactcacagagttatcatc 151680


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,778,279
Number of Sequences: 3902068
Number of extensions: 2778279
Number of successful extensions: 50874
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50726
Number of HSP's gapped (non-prelim): 147
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)