>ref|XM_866534.1| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 2
           (LOC528207), mRNA
          Length = 2283

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 ctacatttcctagtagtaacta 240
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>ref|XM_606619.2| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 1
           (LOC528207), mRNA
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 ctacatttcctagtagtaacta 240
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>ref|XM_878569.1| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 3
           (LOC528207), mRNA
          Length = 2280

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 219 ctacatttcctagtagtaacta 240
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>gb|AC166364.2| Mus musculus BAC clone RP24-394E6 from chromosome 3, complete sequence
          Length = 227070

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tggtgggacatacatgtact 21
             ||||||||||||||||||||
Sbjct: 53896 tggtgggacatacatgtact 53877

>gb|AC103605.8| Mus musculus chromosome 3, clone RP23-335H1, complete sequence
          Length = 222210

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tggtgggacatacatgtact 21
             ||||||||||||||||||||
Sbjct: 32076 tggtgggacatacatgtact 32057

>gb|AY355214.1| Human rhinovirus 33 VP1 capsid protein gene, partial cds
          Length = 858

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   tggtgggacatacatgtact 21
           ||||||||||||||||||||
Sbjct: 447 tggtgggacatacatgtact 428

>gb|AY895108.1| Human coxsackievirus A16 strain shzh02-78 polyprotein gene, partial
            cds
          Length = 3242

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    tggtgggacatacatgtact 21
            ||||||||||||||||||||
Sbjct: 2806 tggtgggacatacatgtact 2787

>ref|XM_794244.1| PREDICTED: Strongylocentrotus purpuratus similar to Zinc finger
            homeobox protein 1b (Smad interacting protein 1)
            (LOC594820), mRNA
          Length = 4092

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  gatctttctctgccaaagag 201
            ||||||||||||||||||||
Sbjct: 2968 gatctttctctgccaaagag 2987

>gb|AY821798.1| Human coxsackievirus A16 strain BJ03-ZDP polyprotein gene, partial
            cds
          Length = 2219

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    tggtgggacatacatgtact 21
            ||||||||||||||||||||
Sbjct: 1794 tggtgggacatacatgtact 1775

>gb|AE008732.1| Salmonella typhimurium LT2, section 40 of 220 of the complete genome
          Length = 22407

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gccctggatctttctctgcc 195
             ||||||||||||||||||||
Sbjct: 20869 gccctggatctttctctgcc 20888

>gb|AF286884.4| Homo sapiens chromosome 8 clone RP11-597D18 map 8p21-p11, complete
              sequence
          Length = 207519

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tacatacacaaatatttaca 127
              ||||||||||||||||||||
Sbjct: 176081 tacatacacaaatatttaca 176062

>emb|CR749549.1| Homo sapiens mRNA; cDNA DKFZp686B0392 (from clone DKFZp686B0392)
          Length = 4650

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  tacatacacaaatatttaca 127
            ||||||||||||||||||||
Sbjct: 4436 tacatacacaaatatttaca 4455

>gb|AC091699.6| Homo sapiens chromosome 10 clone RP11-296D9, complete sequence
          Length = 196856

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    tacacaaatatttacatcag 131
              ||||||||||||||||||||
Sbjct: 158595 tacacaaatatttacatcag 158614

>gb|AC022026.7| Homo sapiens chromosome 10 clone RP11-506B4, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tacacaaatatttacatcag 131
             ||||||||||||||||||||
Sbjct: 42759 tacacaaatatttacatcag 42778

>gb|AC087855.6| Homo sapiens chromosome 8, clone RP11-431M3, complete sequence
          Length = 161256

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tacatacacaaatatttaca 127
              ||||||||||||||||||||
Sbjct: 121491 tacatacacaaatatttaca 121472

>gb|AC087671.9| Homo sapiens chromosome 8, clone RP11-597D18, complete sequence
          Length = 207503

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   tacatacacaaatatttaca 127
             ||||||||||||||||||||
Sbjct: 31440 tacatacacaaatatttaca 31459

>dbj|AK143483.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched
            library, clone:E860012J18 product:unclassifiable, full
            insert sequence
          Length = 4247

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  tacctacatacacaaatatt 123
            ||||||||||||||||||||
Sbjct: 1608 tacctacatacacaaatatt 1589

>gb|AC092756.2| Homo sapiens chromosome 15 clone RP11-429D19 map 15q21.3, complete
              sequence
          Length = 189999

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tactactaccactgtcactc 37
              ||||||||||||||||||||
Sbjct: 188017 tactactaccactgtcactc 188036

>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete
             sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tactactaccactgtcactc 37
             ||||||||||||||||||||
Sbjct: 22748 tactactaccactgtcactc 22767

>gb|AC126308.6| Homo sapiens 12 BAC RP11-586L15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 85752

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   acatacacaaatatttacat 128
             ||||||||||||||||||||
Sbjct: 74837 acatacacaaatatttacat 74818

>gb|AY450479.1| Human rhinovirus 33 polyprotein mRNA, partial cds
          Length = 1370

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   tggtgggacatacatgtact 21
           ||||||||||||||||||||
Sbjct: 677 tggtgggacatacatgtact 658

>gb|AC104327.6| Mus musculus strain C57BL/6J clone rp23-295a4 map 3, complete sequence
          Length = 193174

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tggtgggacatacatgtact 21
             ||||||||||||||||||||
Sbjct: 44226 tggtgggacatacatgtact 44207

>emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chromosome 2, complete
             sequence
          Length = 130872

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   tacctacatacacaaatatt 123
             ||||||||||||||||||||
Sbjct: 95435 tacctacatacacaaatatt 95416

>emb|AL663032.9| Mouse DNA sequence from clone RP23-27I6 on chromosome X, complete
              sequence
          Length = 162995

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    tacatacacaaatatttacatcag 131
              |||||||| |||||||||||||||
Sbjct: 160137 tacatacataaatatttacatcag 160160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,423,669
Number of Sequences: 3902068
Number of extensions: 2423669
Number of successful extensions: 48310
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48280
Number of HSP's gapped (non-prelim): 30
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)