>gb|AY218846.1| Gossypium hirsutum arabinogalactan protein mRNA, complete cds
          Length = 1194

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 45   acaaaattcacaattacaattga 67
            |||||||||||||||||||||||
Sbjct: 1151 acaaaattcacaattacaattga 1129

>emb|BX255954.13| Zebrafish DNA sequence from clone CH211-275D2 in linkage group 20,
            complete sequence
          Length = 164972

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 7    aaaaaatgttacaaaggctcaa 28
            ||||||||||||||||||||||
Sbjct: 6849 aaaaaatgttacaaaggctcaa 6828

>emb|BX601647.4| Zebrafish DNA sequence from clone DKEY-19N10 in linkage group 9,
             complete sequence
          Length = 100697

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 108   acctttgtctatactaaaaagctcaatcc 136
             |||||| ||| ||||||||||||||||||
Sbjct: 38075 acctttttctttactaaaaagctcaatcc 38047

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 177      tgagcaccaaacatgtatcag 197
                |||||||||||||||||||||
Sbjct: 21710335 tgagcaccaaacatgtatcag 21710355

>gb|AY780645.1| Lactobacillus reuteri CRL1098 cobalamin gene cluster, partial sequence
          Length = 43444

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 54    acaattacaattgaaatcatatgaatttc 82
             ||||||||||||||| |||||| ||||||
Sbjct: 15230 acaattacaattgaagtcatattaatttc 15202

>gb|AC084479.1|CBRG02D22 Caenorhabditis briggsae cosmid G02D22, complete sequence
          Length = 41896

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    aattacaattgaaatcatatg 76
             |||||||||||||||||||||
Sbjct: 34928 aattacaattgaaatcatatg 34948

>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062E01
          Length = 161804

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 177    tgagcaccaaacatgtatcag 197
              |||||||||||||||||||||
Sbjct: 109266 tgagcaccaaacatgtatcag 109286

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 253    catcatgaatgaataaaagatctctatt 280
              ||||||||||||| |||| |||||||||
Sbjct: 802162 catcatgaatgaagaaaacatctctatt 802135

>ref|XM_641004.1| Dictyostelium discoideum hypothetical protein (DDB0190385), partial
            mRNA
          Length = 4161

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   aattacaattgaaatcatat 75
            ||||||||||||||||||||
Sbjct: 1281 aattacaattgaaatcatat 1300

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      ctgcaagcggtgccaggacc 110
               ||||||||||||||||||||
Sbjct: 1927091 ctgcaagcggtgccaggacc 1927072

>gb|AC114501.1| Homo sapiens BAC clone RP11-667F9 from 7, complete sequence
          Length = 134339

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tagaaaaaatgttacaaagg 23
             ||||||||||||||||||||
Sbjct: 91479 tagaaaaaatgttacaaagg 91460

>ref|XM_662115.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10010)
           partial mRNA
          Length = 1314

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 ccaaacatgtatcaggatca 202
           ||||||||||||||||||||
Sbjct: 380 ccaaacatgtatcaggatca 399

>gb|AC142223.10| Medicago truncatula clone mth2-5e21, complete sequence
          Length = 122763

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    aaaattcacaattacaattgaaat 70
             |||||||| |||||||||||||||
Sbjct: 26371 aaaattcaaaattacaattgaaat 26348

>gb|AC119417.17| Medicago truncatula clone mth1-6m23, complete sequence
          Length = 110254

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    aaaattcacaattacaattgaaat 70
             |||||||| |||||||||||||||
Sbjct: 92770 aaaattcaaaattacaattgaaat 92793

>gb|AC125503.3| Oryctolagus cuniculus clone LB1-115H21, complete sequence
          Length = 176296

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tcatcatgaatgaataaaag 271
             ||||||||||||||||||||
Sbjct: 94524 tcatcatgaatgaataaaag 94543

>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              3/6
          Length = 317511

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 253    catcatgaatgaataaaagatctctatt 280
              ||||||||||||| |||| |||||||||
Sbjct: 101057 catcatgaatgaagaaaacatctctatt 101030

>gb|AC083755.10| Homo sapiens chromosome 11, clone RP11-175E18, complete sequence
          Length = 161755

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    atcatgaatgaataaaagat 273
              ||||||||||||||||||||
Sbjct: 131793 atcatgaatgaataaaagat 131774

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     tcatcatgaatgaataaaag 271
               ||||||||||||||||||||
Sbjct: 1523970 tcatcatgaatgaataaaag 1523989

>gb|AC090811.5| Homo sapiens chromosome 8, clone RP11-55J5, complete sequence
          Length = 176418

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  tgaatgaataaaagatctct 277
            ||||||||||||||||||||
Sbjct: 3150 tgaatgaataaaagatctct 3131

>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence
          Length = 194212

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    tgaatgaataaaagatctct 277
              ||||||||||||||||||||
Sbjct: 121993 tgaatgaataaaagatctct 121974

>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18,
              complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ctttgtctatactaaaaagc 129
              ||||||||||||||||||||
Sbjct: 140517 ctttgtctatactaaaaagc 140498

>gb|U70984.1|HSU70984 Human Xp22 cosmids U106G5 and U26C6, complete sequence
          Length = 68548

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   catgaatgaataaaagatctctat 279
             ||||| ||||||||||||||||||
Sbjct: 63106 catgattgaataaaagatctctat 63129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,063,198
Number of Sequences: 3902068
Number of extensions: 3063198
Number of successful extensions: 61432
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61350
Number of HSP's gapped (non-prelim): 82
length of query: 303
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 281
effective length of database: 17,147,199,772
effective search space: 4818363135932
effective search space used: 4818363135932
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)