Clone Name | rbastl14g11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATG9_CRYNE (Q5KHR3) Autophagy-related protein 9 | 31 | 0.91 | 2 | ATG9_CRYGA (Q6TGJ4) Autophagy-related protein 9 | 31 | 0.91 | 3 | RIC8A_XENLA (Q45TX8) Synembryn-A (Protein Ric-8A) | 30 | 2.0 | 4 | HSP70_THEPA (Q27031) Heat shock 70 kDa protein (HSP 70.1) (70 kD... | 28 | 4.5 | 5 | HSP70_THEAN (P16019) Heat shock 70 kDa protein (HSP 70.1) (70 kD... | 28 | 4.5 | 6 | V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (... | 28 | 7.7 |
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>ATG9_CRYNE (Q5KHR3) Autophagy-related protein 9| Length = 879 Score = 30.8 bits (68), Expect = 0.91 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +2 Query: 5 DRQYERAKRYIDTPTRHEISIVA--VIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYAL 178 DR YE AK Y+D + ++V V I SF+ + + SL+ PD F +T + Sbjct: 431 DRSYEIAKEYVDQFPKERTALVMRFVAFIAGSFAAVLLVASLIDPD--LFLHFEITPH-- 486 Query: 179 ETTILLYRDLYQILLAHIASSLPR 250 T+L Y ++ +LA +P+ Sbjct: 487 -RTVLFYLGVFGSILAISRGMVPQ 509
>ATG9_CRYGA (Q6TGJ4) Autophagy-related protein 9| Length = 751 Score = 30.8 bits (68), Expect = 0.91 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +2 Query: 5 DRQYERAKRYIDTPTRHEISIVA--VIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYAL 178 DR YE AK Y+D + ++V V + SF+ + + SL+ PD F +T + Sbjct: 342 DRSYETAKEYVDQFPKERTALVMRFVAFVAGSFAAVLLVASLIDPD--LFLHFEITPH-- 397 Query: 179 ETTILLYRDLYQILLAHIASSLPR 250 T+L Y ++ +LA +P+ Sbjct: 398 -RTVLFYLGVFGSVLAISRGMVPQ 420
>RIC8A_XENLA (Q45TX8) Synembryn-A (Protein Ric-8A)| Length = 539 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +2 Query: 20 RAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYALETTILL- 196 R K Y +T + HE + + + + ++ ++ L+ + +G L ALE+T+ L Sbjct: 148 RLKLYNETRSSHESKFFDLRLLFLLTALSVDMRRQLAQE---LRGVSLLTDALESTLALK 204 Query: 197 YRDLYQILLAHIASSLPRIPTQ 262 + D+Y+++ H+A L + T+ Sbjct: 205 WSDIYEVVTDHLAPPLGKEETE 226
>HSP70_THEPA (Q27031) Heat shock 70 kDa protein (HSP 70.1) (70 kDa heat shock| protein) Length = 647 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 17 ERAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAY-ALETTIL 193 ERAKR + + T+ I + ++ + + ++TT+ N F+ ++ ALE++ L Sbjct: 269 ERAKRVLSSSTQATIELDSLYEG-IDYNTTISRARFEELCNEKFRSTLVPVEKALESSGL 327 Query: 194 LYRDLYQILLAHIASSLPRIPTQTSSF 274 R +++++L ++ +P+I T +F Sbjct: 328 DKRSIHEVVLVGGSTRIPKIQTLIKNF 354
>HSP70_THEAN (P16019) Heat shock 70 kDa protein (HSP 70.1) (70 kDa heat shock| protein) Length = 646 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 17 ERAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAY-ALETTIL 193 ERAKR + + T+ I + ++ + + ++TT+ N F+ ++ ALE++ L Sbjct: 269 ERAKRVLSSSTQATIELDSLYEG-IDYNTTISRARFEELCNEKFRSTLVPVEKALESSGL 327 Query: 194 LYRDLYQILLAHIASSLPRIPTQTSSF 274 R +++++L ++ +P+I T +F Sbjct: 328 DKRSIHEVVLVGGSTRIPKIQTLIKNF 354
>V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 810 Score = 27.7 bits (60), Expect = 7.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 109 HCCTETHLYFDNSYYRDF 56 H +TH YFD+SYY F Sbjct: 251 HNALKTHAYFDDSYYEGF 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,370,725 Number of Sequences: 219361 Number of extensions: 615026 Number of successful extensions: 1119 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1119 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)