ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl14g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG9_CRYNE (Q5KHR3) Autophagy-related protein 9 31 0.91
2ATG9_CRYGA (Q6TGJ4) Autophagy-related protein 9 31 0.91
3RIC8A_XENLA (Q45TX8) Synembryn-A (Protein Ric-8A) 30 2.0
4HSP70_THEPA (Q27031) Heat shock 70 kDa protein (HSP 70.1) (70 kD... 28 4.5
5HSP70_THEAN (P16019) Heat shock 70 kDa protein (HSP 70.1) (70 kD... 28 4.5
6V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (... 28 7.7

>ATG9_CRYNE (Q5KHR3) Autophagy-related protein 9|
          Length = 879

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   DRQYERAKRYIDTPTRHEISIVA--VIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYAL 178
           DR YE AK Y+D   +   ++V   V  I  SF+  + + SL+ PD   F    +T +  
Sbjct: 431 DRSYEIAKEYVDQFPKERTALVMRFVAFIAGSFAAVLLVASLIDPD--LFLHFEITPH-- 486

Query: 179 ETTILLYRDLYQILLAHIASSLPR 250
             T+L Y  ++  +LA     +P+
Sbjct: 487 -RTVLFYLGVFGSILAISRGMVPQ 509



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>ATG9_CRYGA (Q6TGJ4) Autophagy-related protein 9|
          Length = 751

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 5   DRQYERAKRYIDTPTRHEISIVA--VIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYAL 178
           DR YE AK Y+D   +   ++V   V  +  SF+  + + SL+ PD   F    +T +  
Sbjct: 342 DRSYETAKEYVDQFPKERTALVMRFVAFVAGSFAAVLLVASLIDPD--LFLHFEITPH-- 397

Query: 179 ETTILLYRDLYQILLAHIASSLPR 250
             T+L Y  ++  +LA     +P+
Sbjct: 398 -RTVLFYLGVFGSVLAISRGMVPQ 420



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>RIC8A_XENLA (Q45TX8) Synembryn-A (Protein Ric-8A)|
          Length = 539

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +2

Query: 20  RAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAYALETTILL- 196
           R K Y +T + HE     +  + +  + ++ ++  L+ +    +G  L   ALE+T+ L 
Sbjct: 148 RLKLYNETRSSHESKFFDLRLLFLLTALSVDMRRQLAQE---LRGVSLLTDALESTLALK 204

Query: 197 YRDLYQILLAHIASSLPRIPTQ 262
           + D+Y+++  H+A  L +  T+
Sbjct: 205 WSDIYEVVTDHLAPPLGKEETE 226



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>HSP70_THEPA (Q27031) Heat shock 70 kDa protein (HSP 70.1) (70 kDa heat shock|
           protein)
          Length = 647

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 17  ERAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAY-ALETTIL 193
           ERAKR + + T+  I + ++ +  + ++TT+         N  F+  ++    ALE++ L
Sbjct: 269 ERAKRVLSSSTQATIELDSLYEG-IDYNTTISRARFEELCNEKFRSTLVPVEKALESSGL 327

Query: 194 LYRDLYQILLAHIASSLPRIPTQTSSF 274
             R +++++L   ++ +P+I T   +F
Sbjct: 328 DKRSIHEVVLVGGSTRIPKIQTLIKNF 354



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>HSP70_THEAN (P16019) Heat shock 70 kDa protein (HSP 70.1) (70 kDa heat shock|
           protein)
          Length = 646

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 17  ERAKRYIDTPTRHEISIVAVIKI*MSFSTTMQLQSLLSPDN*AFQGAILTAY-ALETTIL 193
           ERAKR + + T+  I + ++ +  + ++TT+         N  F+  ++    ALE++ L
Sbjct: 269 ERAKRVLSSSTQATIELDSLYEG-IDYNTTISRARFEELCNEKFRSTLVPVEKALESSGL 327

Query: 194 LYRDLYQILLAHIASSLPRIPTQTSSF 274
             R +++++L   ++ +P+I T   +F
Sbjct: 328 DKRSIHEVVLVGGSTRIPKIQTLIKNF 354



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>V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 810

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 109 HCCTETHLYFDNSYYRDF 56
           H   +TH YFD+SYY  F
Sbjct: 251 HNALKTHAYFDDSYYEGF 268


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,370,725
Number of Sequences: 219361
Number of extensions: 615026
Number of successful extensions: 1119
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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