Clone Name | rbastl14g10 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxygenase-like protein (lox gene) Length = 3123 Score = 333 bits (168), Expect = 2e-88 Identities = 182/189 (96%) Strand = Plus / Minus Query: 107 ttagcatgtcccaacttttgaacagnnnnnnntgcaattaaatcttctcctatctgggcc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3109 ttagcatgtcccaacttttgaacagaaaaaaatgcaattaaatcttctcctatctgggcc 3050 Query: 167 caaatcaatggcgattcggccttcgtggcgagggcccaaatcaatggcgattctcttata 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3049 caaatcaatggcgattcggccttcgtggcgagggcccaaatcaatggcgattctcttata 2990 Query: 227 tgtacgtacttttccctgagacgttcccggcccaaagtatatcgaggctgaaaaattccc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2989 tgtacgtacttttccctgagacgttcccggcccaaagtatatcgaggctgaaaaattccc 2930 Query: 287 acggtccgc 295 ||||||||| Sbjct: 2929 acggtccgc 2921
>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence Length = 222162 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ttaccattgatttacaaatg 40 |||||||||||||||||||| Sbjct: 70840 ttaccattgatttacaaatg 70859
>emb|BX546446.15| Zebrafish DNA sequence from clone DKEY-7K24 in linkage group 6, complete sequence Length = 196818 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 taccattgatttacaaatgtttca 45 |||||||| ||||||||||||||| Sbjct: 55164 taccattgctttacaaatgtttca 55187
>emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-196A3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176202 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 ccattgatttacaaatgttt 43 |||||||||||||||||||| Sbjct: 136492 ccattgatttacaaatgttt 136473
>emb|AL442163.5|CNS07ECT Human chromosome 14 DNA sequence BAC R-90P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167642 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acaaatgtttcaagcatctg 53 |||||||||||||||||||| Sbjct: 6341 acaaatgtttcaagcatctg 6360
>emb|AL450442.2|CNS07EEY Human chromosome 14 DNA sequence BAC R-214N1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 145035 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acaaatgtttcaagcatctg 53 |||||||||||||||||||| Sbjct: 128282 acaaatgtttcaagcatctg 128301
>gb|M63291.1|DROADHDS Drosophila silvestris alcohol dehydrogenase gene, complete cds Length = 1635 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tcttatatgtacgtacttttccctgaga 247 |||||| ||||| ||||||||||||||| Sbjct: 189 tcttatttgtacatacttttccctgaga 162 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,080,203 Number of Sequences: 3902068 Number of extensions: 2080203 Number of successful extensions: 35736 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35724 Number of HSP's gapped (non-prelim): 9 length of query: 295 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 273 effective length of database: 17,147,199,772 effective search space: 4681185537756 effective search space used: 4681185537756 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)