>PA2A_TRIMU (Q90W39) Phospholipase A2 trimucrotoxin precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 138

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 73  LHDNCEL*TTSCSVKMDTAS-S*FSGIILCSRITICESK 186
           +HD C    T CS K D  S S  +GII+C   T CE K
Sbjct: 62  VHDCCYGKLTDCSPKSDIYSYSWKTGIIICGEGTECEKK 100

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -3

Query: 227 SSYILNGCLMVVLPLLSQIVMREHKIIPENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 48
           S +++N CL+V+    S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 47  CYI*R 33
           C+I R
Sbjct: 443 CHILR 447

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -3

Query: 227 SSYILNGCLMVVLPLLSQIVMREHKIIPENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 48
           S +++N CL+V+    S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 47  CYI*R 33
           C+I R
Sbjct: 441 CHILR 445

>LRRN3_MOUSE (Q8CBC6) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 707

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 128 LPVDFRE*FYVHASQFVKVRGERPSSSRL-ICMKTSL 235
           LP   RE FYVH+   +++RG  P    L  C+ T+L
Sbjct: 465 LPNTMREKFYVHSEGTLEIRGITPKEGGLYTCIATNL 501

>LRRN3_RAT (Q9ESY6) Leucine-rich repeats neuronal protein 3 precursor|
           (Neuronal leucine-rich repeat protein 3) (NLRR-3)
          Length = 707

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 128 LPVDFRE*FYVHASQFVKVRGERPSSSRL-ICMKTSL 235
           LP   RE FYVH+   + +RG  P    L  C+ T+L
Sbjct: 465 LPNTLREKFYVHSEGTLDIRGITPKEGGLYTCIATNL 501

>COS7_YEAST (Q07788) Protein COS7|
          Length = 383

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 169 TICESKGRTTIKQPFNMYEDQSQQISS 249
           T CE   RTT+ +PF++ +D++ ++ S
Sbjct: 149 TDCEKMFRTTVLEPFSLKKDKAAKVKS 175

>RPOC_OCEIH (Q8ETY7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = -3

Query: 188  PLLSQIVMREHKIIPENQLEAVSIFTLQDVV*SSQLSCNYSLVYQMECY 42
            P   ++++ ++++I E+Q + +    +Q+V+  S  +CN       +CY
Sbjct: 855  PETGEVIVEKNELISEDQAKTIVESGIQEVIIRSAFTCNTKHGVCQKCY 903

>POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3017

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = -2

Query: 72  LQFGLSNGVLYLTNECNNST 13
           L +G S+G+ +LTN+C+NS+
Sbjct: 191 LTYGNSSGLYHLTNDCSNSS 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,978,745
Number of Sequences: 219361
Number of extensions: 639787
Number of successful extensions: 1265
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)