>gb|AC100763.2| Homo sapiens chromosome 11, clone RP11-748C4, complete sequence
          Length = 172963

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 tagcaagtataccattatata 290
           |||||||||||||||||||||
Sbjct: 912 tagcaagtataccattatata 932

>gb|AC011092.4| Homo sapiens, clone RP11-1H15, complete sequence
          Length = 192318

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   tagcaagtataccattatata 290
             |||||||||||||||||||||
Sbjct: 23454 tagcaagtataccattatata 23434

>gb|AC010614.8| Homo sapiens chromosome 19 clone CTD-2518G19, complete sequence
          Length = 158595

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    cttctacactgacaactgcaa 268
              |||||||||||||||||||||
Sbjct: 103693 cttctacactgacaactgcaa 103713

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 330      aactggtctcttctccagcaatgat 354
                ||||||||||||||| |||||||||
Sbjct: 25791276 aactggtctcttctcaagcaatgat 25791252

>dbj|AK101303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033K21, full
            insert sequence
          Length = 2964

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 330  aactggtctcttctccagcaatgat 354
            ||||||||||||||| |||||||||
Sbjct: 2445 aactggtctcttctcaagcaatgat 2421

>dbj|AK058469.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B08, full
           insert sequence
          Length = 1195

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 330 aactggtctcttctccagcaatgat 354
           ||||||||||||||| |||||||||
Sbjct: 797 aactggtctcttctcaagcaatgat 773

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 330      aactggtctcttctccagcaatgat 354
                ||||||||||||||| |||||||||
Sbjct: 25719452 aactggtctcttctcaagcaatgat 25719428

>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 330   aactggtctcttctccagcaatgat 354
             ||||||||||||||| |||||||||
Sbjct: 12727 aactggtctcttctcaagcaatgat 12703

>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 330    aactggtctcttctccagcaatgat 354
              ||||||||||||||| |||||||||
Sbjct: 158514 aactggtctcttctcaagcaatgat 158490

>gb|AY769280.1| Bombyx mori ribosomal protein L11 (RpL11) mRNA, complete cds
          Length = 675

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 ccttggcggcacgagtcagc 238
           ||||||||||||||||||||
Sbjct: 199 ccttggcggcacgagtcagc 180

>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete
             sequence
          Length = 193053

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   ttctcactcccctgtaactg 334
             ||||||||||||||||||||
Sbjct: 91944 ttctcactcccctgtaactg 91963

>gb|AC095351.5| Homo sapiens X BAC RP11-359C4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 194296

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   taactggtctcttctccagc 348
             ||||||||||||||||||||
Sbjct: 75691 taactggtctcttctccagc 75710

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 6       aaaacactcaattatcacaaaaga 29
               ||||||||||||||||| ||||||
Sbjct: 3324814 aaaacactcaattatcagaaaaga 3324791

>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence
          Length = 191953

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   ttgcatgacaagcatcaatgtcca 185
             ||||||||| ||||||||||||||
Sbjct: 51642 ttgcatgaccagcatcaatgtcca 51619

>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9,
            complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   aaaagagttcagattacagattaa 47
            |||| |||||||||||||||||||
Sbjct: 2688 aaaacagttcagattacagattaa 2711

>emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in linkage group 20, complete
              sequence
          Length = 195351

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    taccattatataatgcgaca 298
              ||||||||||||||||||||
Sbjct: 115185 taccattatataatgcgaca 115204

>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
              complete sequence
          Length = 167317

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      aaaacactcaattatcacaaaaga 29
              ||||||||||||||||| ||||||
Sbjct: 118638 aaaacactcaattatcagaaaaga 118615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,786,517
Number of Sequences: 3902068
Number of extensions: 2786517
Number of successful extensions: 50235
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50149
Number of HSP's gapped (non-prelim): 86
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)